RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Trav14-3A0A075B607 120 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Ighv8-4A0A0A6YW26 117 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Gm3512L7N206 146 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Gm9733Q1AN91 178 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Defa26Q3L180 93 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Sp9Q64HY3 484 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Olfr491Q8VG06 310 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 CtrlQ9ER05 264 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Gm884A2A9H6 3643 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Ighv9-1A0A0B4J1P3 117 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Rpl35aO55142 110 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Cox6a1P43024 111 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Cd59bP58019 129 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Pilrb2Q2YFS1 225 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Bsph1Q3UW26 133 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Igfbpl1Q80W15 270 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Q9CQ90 155 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Mrpl52Q9D0Y8 121 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 4933414I15RikQ9D4D5 133 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Rnf7Q9WTZ1 113 aa6.6□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Ighv1-22A0A075B5U7 117 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Igkv14-130A0A0G2JF45 117 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Omt2bD3YX29 119 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 9830107B12RikD3Z5D6 160 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Olfr177E9Q7W1 309 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Znrd1Q791N7 123 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Ammecr1Q9JHT5 344 aaKnown RBP6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 HilpdaQ9JLS0 64 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 IgipA0A1B0GR74 53 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Esp3J3QN49 87 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Gm26661M0QWV4 156 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Tnfaip6O08859 275 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Ccl2P10148 148 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Loxl1P97873 607 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Tpsab1Q02844 273 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 NrepQ07475 68 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 Gm9945Q8BNZ3 91 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 B430305J03RikQ8BQQ8 176 aa6.59□□□□□ -1.35
Cdc40-201ENSMUST00000044166 P01729 129 aa6.59□□□□□ -1.36
Cdc40-201ENSMUST00000044166 P18525 117 aa6.59□□□□□ -1.36
Cdc40-201ENSMUST00000044166 4930596D02RikQ3V0H9 216 aa6.59□□□□□ -1.36
Cdc40-201ENSMUST00000044166 C1qtnf5Q8K479 243 aa6.59□□□□□ -1.36
Cdc40-201ENSMUST00000044166 SpenQ62504 3644 aaKnown RBP6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Trbv17A0A140T8P8 114 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Gm3618D3Z4P5 127 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Gm15056F6ZR08 88 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Loxl2P58022 776 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Folr2Q05685 251 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Spink13Q3UTS8 97 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 9130213A22RikQ3V3T2 120 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Defa25Q5G864 92 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Ss18l1Q8BW22 402 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 GalmQ8K157 342 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Q9CQM1 111 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Gm2916Q9D9B9 127 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Celsr1O35161 3034 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 A0A1L1SR50 188 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 1700003H04RikE9PXM2 192 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Gm5093E9PZB3 174 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 CrxO54751 299 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 P04946 108 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Ly6c1P0CW02 131 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Rpl27aP14115 148 aaKnown RBP6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Col8a2P25318 699 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Dynlrb1P62627 96 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 KncnQ307W7 124 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Gm10188Q3V432 135 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Apoc4Q61268 124 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Eda2rQ8BX35 297 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Klk5Q9D140 293 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 DscamQ9ERC8 2013 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 CadB2RQC6 2225 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Trav5-1A0A075B5Z7 114 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Tarm1B6A8R8 288 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Cd209gD3Z5D4 194 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Cr2P19070 1025 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Spsb3Q571F5 354 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Fxyd3Q61835 88 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 PirtQ8BFY0 135 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Mrpl32Q9DCI9 187 aaKnown RBP6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Slc25a15Q9WVD5 301 aa6.58□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Asxl3Q8C4A5 2259 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Ighv3-6P18531 116 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Wt1P22561 449 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Olfr1199Q8VF94 310 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Ppp1r14aQ91VC7 147 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Them7Q9DCP4 223 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Bhlha15Q9QYC3 197 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Igkv1-133A0A0B4J1H8 120 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Gm6793B2RXM2 351 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 P0C913 63 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Cdx4Q07424 282 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Q08AU9 97 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Znf691Q3TDE8 283 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Tmem101Q91VP7 257 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Odf3Q920N1 254 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Ncoa6Q9JL19 2067 aa6.57□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Cox7a2P48771 83 aa6.56□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Gnb1lQ9EQ15 326 aa6.56□□□□□ -1.36
Cdc40-201ENSMUST00000044166 Ahctf1Q8CJF7 2243 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms