RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Gm16686Q3UMN9 131 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 4930596D02RikQ3V0H9 216 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gkn1Q9CR36 201 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Zfp119aQ9JIC0 545 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Higd1aQ9JLR9 95 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Hbb-bsA8DUK4 147 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm933J3QPC1 141 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Hbb-b1P02088 147 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Hapln4Q80WM4 400 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Il19Q8CJ70 176 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Ssbp2Q9CYZ8 361 aa8.21□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Mrpl32Q9DCI9 187 aaKnown RBP8.21□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Ighv1-9A0A0A6YW37 117 aa8.21□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 P01736 120 aa8.21□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 A930003A15RikQ3U552 87 aa8.21□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Prdm6Q3UZD5 596 aa8.21□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Msrb3Q8BU85 253 aa8.21□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Tusc5Q8C838 173 aa8.21□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Frem1Q684R7 2191 aa8.21□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Ighv1-39A0A075B5V5 117 aa8.21□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Gm20708H3BKF4 155 aa8.21□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Plxnb1Q8CJH3 2119 aa8.21□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Trdv5A0A075B661 115 aa8.21□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Ccl17F6R5P4 103 aa8.21□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Cox7a2lQ61387 111 aa8.21□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Dmrt3Q80WT2 476 aa8.21□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Ifi27l2aQ8R412 90 aa8.21□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Fbxl15Q91W61 300 aa8.21□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Tmem88bQ3TYP4 173 aa8.2□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 9130213A22RikQ3V3T2 120 aa8.2□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Ahctf1Q8CJF7 2243 aaKnown RBP8.2□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Gm29666A0A087WQ99 126 aa8.2□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 E030018B13RikJ3QMS9 113 aa8.2□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Wt1P22561 449 aa8.2□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 4930544G11RikQ9CR99 193 aa8.2□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Sptbn2Q68FG2 2388 aa8.2□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Ros1Q78DX7 2340 aa8.2□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Tex26Q0VB26 296 aa8.2□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 AY761184Q9D848 116 aa8.2□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Trav9d-1A0A075B699 112 aa8.2□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 ArtnQ9Z0L2 224 aa8.2□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Ighv8-6A0A0A6YXA3 118 aa8.19□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Igkv20-101-2A0A0G2JDU3 113 aa8.19□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Bak1O08734 209 aa8.19□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Gm5105Q8C6Y9 112 aa8.19□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Trbv30A0A0B4J1P1 111 aa8.19□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Gm36368A0A1D5RLK8 91 aa8.19□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 CenpeQ6RT24 2474 aaKnown RBP8.19□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Cysltr1Q99JA4 352 aa8.19□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Tcrg-C1A0A075B5Z0 172 aa8.19□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Tcrg-C3L7N479 172 aa8.19□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Gm37988J3QM41 62 aa8.19□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 RetnQ99P87 114 aa8.19□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 V1ra8Q9EQ48 279 aa8.19□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Greb1Q3UHK3 1954 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Gm35549A0A0N4SUS7 141 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Tmem238A9JSM3 176 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Ighv1-62-3P01754 117 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Il1f10Q8R459 152 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 4933414I15RikQ9D4D5 133 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Zfp950A0A0U1RQ46 609 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 NdpP48744 131 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Trav14-3A0A075B607 120 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Nxph4G3X9N5 304 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Ang2Q64438 145 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Tex48Q9DA81 110 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Trip12G5E870 2025 aaKnown RBP8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Ighv1-23A0A0A6YVW3 117 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Znrf2Q71FD5 238 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Zc2hc1aQ8BJH1 324 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Slamf6Q9ET39 351 aa8.18□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Pygo2Q80V76 405 aa8.17□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Ube2v1Q9CZY3 147 aa8.17□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Myod1P10085 318 aa8.17□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Gpx1P11352 201 aa8.17□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 ApomQ9Z1R3 190 aa8.17□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Nsun4C4P6S0 806 aaKnown RBP8.17□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Gm5819E9PZ96 154 aa8.17□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Gng7Q61016 68 aa8.17□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Pxt1Q8K459 51 aa8.17□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Ndufc2Q9CQ54 120 aa8.17□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 1110002E22RikE0CYV9 1786 aa8.17□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Trav14n-2A0A0G2JDF5 121 aa8.17□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Gm6793B2RXM2 351 aa8.17□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Uqcrfs1Q9CR68 274 aa8.16□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Plac1Q9JI83 173 aa8.16□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Myo7bQ99MZ6 2113 aa8.16□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 P01658 132 aa8.16□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Cox6b1P56391 86 aaKnown RBP8.16□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Sptbn1Q62261 2363 aaKnown RBP8.16□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Ighv5-6A0A075B5Q0 117 aa8.15□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Card19Q9D1I2 183 aa8.15□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Ly86O88188 162 aa8.15□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Gm10188Q3V432 135 aa8.15□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Defa-rs10Q64263 91 aa8.15□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 KprpB2RUR4 657 aa8.15□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 P01727 129 aa8.15□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 P03985 172 aa8.15□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Cela2aP05208 271 aa8.15□□□□□ -1.1
Ccdc40-201ENSMUST00000035935 Rpl36aP83882 106 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 282.9 ms