RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 SbpP15501 199 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Ccsmst1Q6RUT7 136 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 4930412O13RikQ9D5M9 106 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Lyrm7Q9DA03 104 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Ammecr1Q9JHT5 344 aaKnown RBP9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Trav16d-dv11A0A075B617 117 aa9.02□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Colca2F8VPY8 239 aa9.02□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Cox8bP48772 70 aa9.02□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Arhgap32Q811P8 2089 aa9.02□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Tcf20Q9EPQ8 1987 aa9.02□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Trav6d-7A0A075B6B0 112 aa9.02□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm45521A0A1B0GRK0 198 aa9.02□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm45785A0A1B0GT05 94 aa9.02□□□□□ -0.97
Topbp1-201ENSMUST00000035164 PolP10400 120 aa9.02□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gpx1P11352 201 aa9.02□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Khdc1cQ4KL78 166 aa9.02□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Zfp292Q9Z2U2 2698 aa9.02□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Ighv14-2A0A075B5R7 117 aa9.02□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Wfdc2Q9DAU7 174 aa9.02□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Prok1Q14A28 105 aa9.02□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Sp9Q64HY3 484 aa9.02□□□□□ -0.97
Topbp1-201ENSMUST00000035164 H2al2bA9Z055 111 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Cited2O35740 269 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Olfr873Q8VFJ0 319 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Ccl3P10855 92 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gpx7Q99LJ6 186 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 PpdpfQ9CR37 115 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gnb1lQ9EQ15 326 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Timm23Q9WTQ8 209 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Prrc2aQ7TSC1 2158 aaKnown RBP9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Trav14d-1A0A075B6B1 121 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Omt2bD3YX29 119 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 S100a4P07091 101 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 NrepQ07475 68 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Prss41Q920S2 322 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Them7Q9DCP4 223 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Cend1Q9JKC6 149 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Fam240bJ3QMB3 78 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 P01794 123 aa9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Mrpl53Q9D1H8 118 aaKnown RBP9.01□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm9733Q1AN91 178 aa9□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Oosp2Q4FZG8 168 aa9□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm15294V9GXA7 121 aa9□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Trav7-5A0A0G2JFX6 112 aa9□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm15127B1AVZ5 449 aa9□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm15091B1AZM2 449 aa9□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Stxbp6Q8R3T5 210 aa9□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Fstl3Q9EQC7 256 aa9□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Esp23A8R0V5 104 aa9□□□□□ -0.97
Topbp1-201ENSMUST00000035164 P04942 107 aa9□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Muc15Q8C6Z1 331 aa8.99□□□□□ -0.97
Topbp1-201ENSMUST00000035164 QrfpQ8CE23 124 aa8.99□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Necap2Q9D1J1 266 aa8.99□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Rif1Q6PR54 2419 aaKnown RBP8.99□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Usp9xP70398 2559 aaKnown RBP8.99□□□□□ -0.97
Topbp1-201ENSMUST00000035164 SpegQ62407 3262 aa8.99□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Trav14n-2A0A0G2JDF5 121 aa8.99□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Rnase2aQ8K196 155 aa8.99□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Fbn2Q61555 2907 aa8.99□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Zfp950A0A0U1RQ46 609 aa8.99□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm28778A0A087WSK7 233 aa8.99□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm6871L7N248 545 aa8.99□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Csn3P06796 181 aa8.99□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Spata45Q9CVW4 97 aa8.99□□□□□ -0.97
Topbp1-201ENSMUST00000035164 1700084M14RikB1AT01 78 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm21060J3KMU4 56 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 CrxO54751 299 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm5105Q8C6Y9 112 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Dmrtc2Q8CGW9 370 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Hoxc12Q8K5B8 280 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Pear1Q8VIK5 1034 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Tomm6Q9CQN3 74 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Fmc1Q9CR13 113 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Hrct1Q9D6B9 109 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 IgipA0A1B0GR74 53 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Spink6Q8BT20 105 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Klk7Q91VE3 249 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Ramp1Q9WTJ5 148 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Trav21-dv12A0A075B6C4 109 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Bak1O08734 209 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Prr3Q811B5 190 aaKnown RBP8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Slc25a16Q8C0K5 332 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Igsf23B2RTN2 239 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm10604Q3V0X7 143 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Ociad2Q9D8W7 154 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Q9DAZ5 108 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Dusp14Q9JLY7 198 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 MycbQ6P8Z1 170 aa8.98□□□□□ -0.97
Topbp1-201ENSMUST00000035164 P18532 116 aa8.97□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Olfr904Q7TRC9 310 aa8.97□□□□□ -0.97
Topbp1-201ENSMUST00000035164 LbhQ9CX60 105 aa8.97□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Trdv1A0A075B657 112 aa8.97□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm15128A2ADW8 449 aa8.97□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm15080A2BI02 449 aa8.97□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm15093A2BI72 449 aa8.97□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Luzp4B1AV09 449 aa8.97□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm15107B1B0X0 449 aa8.97□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm15097E9QA14 449 aa8.97□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Gm15085Q62012 449 aa8.97□□□□□ -0.97
Topbp1-201ENSMUST00000035164 Olfr745Q7TRL9 328 aa8.97□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 134.1 ms