RNA–Protein interactions for RNA: ENST00000638914.1

PAX6-245, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 7,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-245ENST00000638914 C5orf42Q9H799 3197 aa7.33□□□□□ -1.24
PAX6-245ENST00000638914 OXTP01178 125 aa7.32□□□□□ -1.24
PAX6-245ENST00000638914 DNAH12Q6ZR08 3092 aa7.31□□□□□ -1.24
PAX6-245ENST00000638914 A0A0D9SG42 100 aa7.29□□□□□ -1.24
PAX6-245ENST00000638914 KMT2BQ9UMN6 2715 aaPredicted RBP7.28□□□□□ -1.24
PAX6-245ENST00000638914 ZCCHC13Q8WW36 166 aaKnown RBP7.28□□□□□ -1.24
PAX6-245ENST00000638914 FP248Q71RG6 208 aaPredicted RBP7.26□□□□□ -1.25
PAX6-245ENST00000638914 TRANK1O15050 2925 aa7.26□□□□□ -1.25
PAX6-245ENST00000638914 LUZP6Q538Z0 58 aa7.25□□□□□ -1.25
PAX6-245ENST00000638914 MGAQ8IWI9 3026 aa7.24□□□□□ -1.25
PAX6-245ENST00000638914 LINC00483Q53H64 154 aa7.24□□□□□ -1.25
PAX6-245ENST00000638914 KRTAP21-3Q3LHN1 58 aa7.24□□□□□ -1.25
PAX6-245ENST00000638914 SPRR1AP35321 89 aa7.23□□□□□ -1.25
PAX6-245ENST00000638914 C4orf26Q17RF5 130 aa7.23□□□□□ -1.25
PAX6-245ENST00000638914 SPRR1BP22528 89 aa7.22□□□□□ -1.25
PAX6-245ENST00000638914 DSPP15924 2871 aaKnown RBP7.21□□□□□ -1.26
PAX6-245ENST00000638914 S4R3F8 94 aa7.21□□□□□ -1.26
PAX6-245ENST00000638914 FLNCQ14315 2725 aa7.2□□□□□ -1.26
PAX6-245ENST00000638914 A0A1B0GU33 70 aa7.2□□□□□ -1.26
PAX6-245ENST00000638914 H7BZZ5 65 aa7.18□□□□□ -1.26
PAX6-245ENST00000638914 R4GN34 69 aa7.18□□□□□ -1.26
PAX6-245ENST00000638914 CHD7Q9P2D1 2997 aa7.18□□□□□ -1.26
PAX6-245ENST00000638914 KRTAP10-1P60331 282 aa7.17□□□□□ -1.26
PAX6-245ENST00000638914 SPINK7P58062 85 aa7.17□□□□□ -1.26
PAX6-245ENST00000638914 Q1T7F1 81 aa7.14□□□□□ -1.27
PAX6-245ENST00000638914 DMAC1Q96GE9 116 aa7.14□□□□□ -1.27
PAX6-245ENST00000638914 OCR1Q9BZK8 76 aa7.13□□□□□ -1.27
PAX6-245ENST00000638914 UTP20O75691 2785 aaKnown RBP7.13□□□□□ -1.27
PAX6-245ENST00000638914 KRTAP1-5Q9BYS1 174 aa7.13□□□□□ -1.27
PAX6-245ENST00000638914 A0A0C4DFX4 3053 aa7.12□□□□□ -1.27
PAX6-245ENST00000638914 Q6ZR54 194 aa7.11□□□□□ -1.27
PAX6-245ENST00000638914 KRTAP10-2P60368 255 aa7.11□□□□□ -1.27
PAX6-245ENST00000638914 TENM4Q6N022 2769 aa7.1□□□□□ -1.27
PAX6-245ENST00000638914 MMP24-AS1A0A0U1RRL7 71 aa7.1□□□□□ -1.27
PAX6-245ENST00000638914 PCNTO95613 3336 aa7.08□□□□□ -1.28
PAX6-245ENST00000638914 NBEAL2Q6ZNJ1 2754 aa7.08□□□□□ -1.28
PAX6-245ENST00000638914 FRYQ5TBA9 3013 aa7.08□□□□□ -1.28
PAX6-245ENST00000638914 PLAC4Q8WY50 150 aa7.07□□□□□ -1.28
PAX6-245ENST00000638914 HIVEP1P15822 2718 aa7.07□□□□□ -1.28
PAX6-245ENST00000638914 LINC00472Q9H8W2 130 aa7.07□□□□□ -1.28
PAX6-245ENST00000638914 ITPR1Q14643 2758 aa7.05□□□□□ -1.28
PAX6-245ENST00000638914 Q5W150 140 aa7.04□□□□□ -1.28
PAX6-245ENST00000638914 RANBP2P49792 3224 aaKnown RBP7.03□□□□□ -1.28
PAX6-245ENST00000638914 KRTAP26-1Q6PEX3 210 aa7.02□□□□□ -1.29
PAX6-245ENST00000638914 CHD9Q3L8U1 2897 aa7.02□□□□□ -1.29
PAX6-245ENST00000638914 CFAP54Q96N23 3096 aa7.02□□□□□ -1.29
PAX6-245ENST00000638914 Q8N9P0 234 aaPredicted RBP7.01□□□□□ -1.29
PAX6-245ENST00000638914 LCA10Q71F78 164 aa7.01□□□□□ -1.29
PAX6-245ENST00000638914 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
PAX6-245ENST00000638914 REV3LO60673 3130 aa6.99□□□□□ -1.29
PAX6-245ENST00000638914 RPS29P62273 56 aaKnown RBP6.99□□□□□ -1.29
PAX6-245ENST00000638914 WDFY4Q6ZS81 3184 aa6.98□□□□□ -1.29
PAX6-245ENST00000638914 M0QZ58 72 aa6.94□□□□□ -1.3
PAX6-245ENST00000638914 PRUNE2Q8WUY3 3088 aa6.93□□□□□ -1.3
PAX6-245ENST00000638914 Q8NDZ9 215 aa6.92□□□□□ -1.3
PAX6-245ENST00000638914 LINC01558Q9Y6Z2 57 aa6.92□□□□□ -1.3
PAX6-245ENST00000638914 Q75L30 129 aa6.91□□□□□ -1.3
PAX6-245ENST00000638914 LAMA2P24043 3122 aaKnown RBP6.9□□□□□ -1.3
PAX6-245ENST00000638914 RPL37P61927 97 aaKnown RBP6.9□□□□□ -1.3
PAX6-245ENST00000638914 ASB16-AS1Q495Z4 193 aa6.88□□□□□ -1.31
PAX6-245ENST00000638914 NIPBLQ6KC79 2804 aaeCLIP6.88□□□□□ -1.31
PAX6-245ENST00000638914 A0A087X002 238 aa6.86□□□□□ -1.31
PAX6-245ENST00000638914 TENM3Q9P273 2699 aa6.85□□□□□ -1.31
PAX6-245ENST00000638914 TRIOO75962 3097 aa6.85□□□□□ -1.31
PAX6-245ENST00000638914 H1FX-AS1Q4G0G2 97 aa6.84□□□□□ -1.31
PAX6-245ENST00000638914 KRTAP4-16G5E9R7 235 aaPredicted RBP6.84□□□□□ -1.31
PAX6-245ENST00000638914 TACC2O95359 2948 aa6.84□□□□□ -1.31
PAX6-245ENST00000638914 PANO1I0J062 215 aa6.84□□□□□ -1.32
PAX6-245ENST00000638914 Q6ZRN7 208 aaPredicted RBP6.82□□□□□ -1.32
PAX6-245ENST00000638914 APCP25054 2843 aa6.82□□□□□ -1.32
PAX6-245ENST00000638914 ADM2Q7Z4H4 148 aa6.8□□□□□ -1.32
PAX6-245ENST00000638914 Q5XG85 94 aa6.78□□□□□ -1.32
PAX6-245ENST00000638914 CRYBG3Q68DQ2 2970 aa6.78□□□□□ -1.32
PAX6-245ENST00000638914 LAMA3Q16787 3333 aa6.76□□□□□ -1.33
PAX6-245ENST00000638914 FRYLO94915 3013 aa6.75□□□□□ -1.33
PAX6-245ENST00000638914 HTTP42858 3142 aa6.75□□□□□ -1.33
PAX6-245ENST00000638914 TENM1Q9UKZ4 2725 aa6.74□□□□□ -1.33
PAX6-245ENST00000638914 ROMO1P60602 79 aa6.74□□□□□ -1.33
PAX6-245ENST00000638914 A0A0A0MQY5 61 aa6.74□□□□□ -1.33
PAX6-245ENST00000638914 C20orf166-AS1Q96NR2 134 aa6.73□□□□□ -1.33
PAX6-245ENST00000638914 DMXL2Q8TDJ6 3036 aa6.73□□□□□ -1.33
PAX6-245ENST00000638914 VPS13AQ96RL7 3174 aa6.72□□□□□ -1.33
PAX6-245ENST00000638914 MKI67P46013 3256 aaKnown RBP6.7□□□□□ -1.34
PAX6-245ENST00000638914 COL12A1Q99715 3063 aa6.69□□□□□ -1.34
PAX6-245ENST00000638914 CELSR2Q9HCU4 2923 aa6.69□□□□□ -1.34
PAX6-245ENST00000638914 A8MUU9 505 aa6.68□□□□□ -1.34
PAX6-245ENST00000638914 KRTAP29-1A8MX34 341 aaPredicted RBP6.67□□□□□ -1.34
PAX6-245ENST00000638914 LRBAP50851 2863 aa6.66□□□□□ -1.34
PAX6-245ENST00000638914 KALRNO60229 2985 aa6.65□□□□□ -1.34
PAX6-245ENST00000638914 LAMA1P25391 3075 aa6.64□□□□□ -1.35
PAX6-245ENST00000638914 NF1P21359 2839 aa6.64□□□□□ -1.35
PAX6-245ENST00000638914 Q5VV11 94 aa6.62□□□□□ -1.35
PAX6-245ENST00000638914 KRTAP13-2Q52LG2 175 aa6.62□□□□□ -1.35
PAX6-245ENST00000638914 ASH1LQ9NR48 2969 aaKnown RBP6.61□□□□□ -1.35
PAX6-245ENST00000638914 ATMQ13315 3056 aa6.61□□□□□ -1.35
PAX6-245ENST00000638914 NOTCH2NLQ7Z3S9 236 aa6.6□□□□□ -1.35
PAX6-245ENST00000638914 KRTAP13-1Q8IUC0 172 aa6.59□□□□□ -1.35
PAX6-245ENST00000638914 ZZEF1O43149 2961 aa6.59□□□□□ -1.35
PAX6-245ENST00000638914 DCHS2Q6V1P9 2916 aa6.58□□□□□ -1.36
PAX6-245ENST00000638914 KRTAP11-1Q8IUC1 163 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms