RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 CMYA5Q8N3K9 4069 aa6.84□□□□□ -1.31
SNIP1-204ENST00000638725 IGLV8-61A0A075B6I0 122 aa6.84□□□□□ -1.31
SNIP1-204ENST00000638725 DNAH10Q8IVF4 4471 aa6.83□□□□□ -1.32
SNIP1-204ENST00000638725 CYP4F30PQ9H0H9 118 aa6.83□□□□□ -1.32
SNIP1-204ENST00000638725 C16orf90A8MZG2 172 aa6.82□□□□□ -1.32
SNIP1-204ENST00000638725 UBE2AP49459 152 aa6.82□□□□□ -1.32
SNIP1-204ENST00000638725 V9GYY9 64 aa6.82□□□□□ -1.32
SNIP1-204ENST00000638725 MAST4O15021 2626 aa6.82□□□□□ -1.32
SNIP1-204ENST00000638725 KRTAP1-5Q9BYS1 174 aa6.82□□□□□ -1.32
SNIP1-204ENST00000638725 Q1T7F1 81 aa6.81□□□□□ -1.32
SNIP1-204ENST00000638725 KRTAP11-1Q8IUC1 163 aa6.81□□□□□ -1.32
SNIP1-204ENST00000638725 KRTAP29-1A8MX34 341 aaPredicted RBP6.81□□□□□ -1.32
SNIP1-204ENST00000638725 MP68P56378 58 aa6.81□□□□□ -1.32
SNIP1-204ENST00000638725 LINC00208Q96KT6 92 aa6.81□□□□□ -1.32
SNIP1-204ENST00000638725 STAB1Q9NY15 2570 aa6.81□□□□□ -1.32
SNIP1-204ENST00000638725 TRAV22A0A0B4J277 110 aa6.8□□□□□ -1.32
SNIP1-204ENST00000638725 PHF5AQ7RTV0 110 aaKnown RBP6.8□□□□□ -1.32
SNIP1-204ENST00000638725 NOTCH1P46531 2555 aa6.8□□□□□ -1.32
SNIP1-204ENST00000638725 HUWE1Q7Z6Z7 4374 aaKnown RBP6.8□□□□□ -1.32
SNIP1-204ENST00000638725 FBN1P35555 2871 aaKnown RBP6.79□□□□□ -1.32
SNIP1-204ENST00000638725 PSPHP1O15172 72 aa6.79□□□□□ -1.32
SNIP1-204ENST00000638725 NDUFB1O75438 58 aa6.79□□□□□ -1.32
SNIP1-204ENST00000638725 CHTF8P0CG12 524 aa6.79□□□□□ -1.32
SNIP1-204ENST00000638725 DNAH3Q8TD57 4116 aa6.79□□□□□ -1.32
SNIP1-204ENST00000638725 CNBPP62633 177 aaKnown RBP6.78□□□□□ -1.32
SNIP1-204ENST00000638725 CASC2Q6XLA1 102 aa6.78□□□□□ -1.32
SNIP1-204ENST00000638725 H0Y9P7 68 aa6.77□□□□□ -1.33
SNIP1-204ENST00000638725 PRR15Q8IV56 129 aa6.77□□□□□ -1.33
SNIP1-204ENST00000638725 DNAH9Q9NYC9 4486 aa6.77□□□□□ -1.33
SNIP1-204ENST00000638725 B9D2Q9BPU9 175 aa6.76□□□□□ -1.33
SNIP1-204ENST00000638725 SEC61GP60059 68 aa6.75□□□□□ -1.33
SNIP1-204ENST00000638725 LINC00472Q9H8W2 130 aa6.75□□□□□ -1.33
SNIP1-204ENST00000638725 A8MWP4 228 aa6.74□□□□□ -1.33
SNIP1-204ENST00000638725 SPRR1BP22528 89 aa6.74□□□□□ -1.33
SNIP1-204ENST00000638725 K7EIL1 84 aa6.74□□□□□ -1.33
SNIP1-204ENST00000638725 SRRM2Q9UQ35 2752 aaKnown RBP6.73□□□□□ -1.33
SNIP1-204ENST00000638725 A8MUN3 132 aa6.73□□□□□ -1.33
SNIP1-204ENST00000638725 LYSTQ99698 3801 aa6.73□□□□□ -1.33
SNIP1-204ENST00000638725 H0Y9J4 135 aa6.71□□□□□ -1.33
SNIP1-204ENST00000638725 H3BPC8 53 aa6.71□□□□□ -1.34
SNIP1-204ENST00000638725 SPANXA2-OT1Q8N9U9 137 aa6.71□□□□□ -1.34
SNIP1-204ENST00000638725 NBEAL1Q6ZS30 2694 aa6.71□□□□□ -1.34
SNIP1-204ENST00000638725 UBE2DNLQ8IWF7 75 aa6.7□□□□□ -1.34
SNIP1-204ENST00000638725 MMP24-AS1A0A0U1RRL7 71 aa6.69□□□□□ -1.34
SNIP1-204ENST00000638725 COL6A5A8TX70 2615 aa6.69□□□□□ -1.34
SNIP1-204ENST00000638725 C9orf163Q8N9P6 203 aa6.69□□□□□ -1.34
SNIP1-204ENST00000638725 PANO1I0J062 215 aa6.68□□□□□ -1.34
SNIP1-204ENST00000638725 C14orf177Q52M58 125 aa6.68□□□□□ -1.34
SNIP1-204ENST00000638725 Q5VV11 94 aa6.68□□□□□ -1.34
SNIP1-204ENST00000638725 PMAIP1Q13794 54 aa6.67□□□□□ -1.34
SNIP1-204ENST00000638725 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
SNIP1-204ENST00000638725 A8MU10 97 aa6.67□□□□□ -1.34
SNIP1-204ENST00000638725 Q8N9P0 234 aaPredicted RBP6.66□□□□□ -1.34
SNIP1-204ENST00000638725 APLNQ9ULZ1 77 aa6.65□□□□□ -1.34
SNIP1-204ENST00000638725 IGLV9-49A0A0B4J1Y8 123 aa6.65□□□□□ -1.35
SNIP1-204ENST00000638725 KRTAP13-1Q8IUC0 172 aa6.65□□□□□ -1.35
SNIP1-204ENST00000638725 Q96NJ1 140 aa6.64□□□□□ -1.35
SNIP1-204ENST00000638725 PCOTHQ58A44 107 aa6.63□□□□□ -1.35
SNIP1-204ENST00000638725 COA5Q86WW8 74 aa6.63□□□□□ -1.35
SNIP1-204ENST00000638725 PRR15LQ9BU68 103 aa6.62□□□□□ -1.35
SNIP1-204ENST00000638725 CHKB-CPT1BH3BT56 60 aa6.62□□□□□ -1.35
SNIP1-204ENST00000638725 STAB2Q8WWQ8 2551 aa6.61□□□□□ -1.35
SNIP1-204ENST00000638725 IGLV7-46A0A075B6I9 117 aa6.61□□□□□ -1.35
SNIP1-204ENST00000638725 LIMD2Q9BT23 127 aa6.61□□□□□ -1.35
SNIP1-204ENST00000638725 ASB16-AS1Q495Z4 193 aa6.6□□□□□ -1.35
SNIP1-204ENST00000638725 C8orf17Q9NRJ1 99 aa6.6□□□□□ -1.35
SNIP1-204ENST00000638725 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.6□□□□□ -1.35
SNIP1-204ENST00000638725 CD164Q04900 197 aa6.59□□□□□ -1.35
SNIP1-204ENST00000638725 TENM2Q9NT68 2774 aa6.59□□□□□ -1.35
SNIP1-204ENST00000638725 MOBPQ13875 183 aa6.59□□□□□ -1.35
SNIP1-204ENST00000638725 COL7A1Q02388 2944 aa6.59□□□□□ -1.36
SNIP1-204ENST00000638725 DNAH7Q8WXX0 4024 aa6.58□□□□□ -1.36
SNIP1-204ENST00000638725 IGHV6-1A0A0B4J1U7 121 aa6.57□□□□□ -1.36
SNIP1-204ENST00000638725 NBDYA0A0U1RRE5 68 aa6.57□□□□□ -1.36
SNIP1-204ENST00000638725 NDUFS5O43920 106 aa6.57□□□□□ -1.36
SNIP1-204ENST00000638725 Q6ZRN7 208 aaPredicted RBP6.57□□□□□ -1.36
SNIP1-204ENST00000638725 TP53AIP1Q9HCN2 124 aa6.57□□□□□ -1.36
SNIP1-204ENST00000638725 PLECQ15149 4684 aaKnown RBP6.56□□□□□ -1.36
SNIP1-204ENST00000638725 SPACA4Q8TDM5 124 aa6.56□□□□□ -1.36
SNIP1-204ENST00000638725 Q6ZR54 194 aa6.56□□□□□ -1.36
SNIP1-204ENST00000638725 MGAM2Q2M2H8 2515 aa6.55□□□□□ -1.36
SNIP1-204ENST00000638725 LINC00483Q53H64 154 aa6.55□□□□□ -1.36
SNIP1-204ENST00000638725 A0A1B0GVX0 72 aa6.55□□□□□ -1.36
SNIP1-204ENST00000638725 ANAPC11Q9NYG5 84 aa6.55□□□□□ -1.36
SNIP1-204ENST00000638725 A0A087X002 238 aa6.54□□□□□ -1.36
SNIP1-204ENST00000638725 Q75L30 129 aa6.54□□□□□ -1.36
SNIP1-204ENST00000638725 NOTCH2NLQ7Z3S9 236 aa6.54□□□□□ -1.36
SNIP1-204ENST00000638725 WWC2-AS2Q96NR7 200 aa6.54□□□□□ -1.36
SNIP1-204ENST00000638725 LOC101927531A0A1B0GV80 90 aa6.53□□□□□ -1.36
SNIP1-204ENST00000638725 MDFIQ99750 246 aa6.53□□□□□ -1.36
SNIP1-204ENST00000638725 DYNC2H1Q8NCM8 4307 aaKnown RBP6.53□□□□□ -1.36
SNIP1-204ENST00000638725 LCA10Q71F78 164 aa6.52□□□□□ -1.37
SNIP1-204ENST00000638725 A6NED7 52 aa6.52□□□□□ -1.37
SNIP1-204ENST00000638725 MRPL34Q9BQ48 92 aaKnown RBP6.52□□□□□ -1.37
SNIP1-204ENST00000638725 CDK2AP2O75956 126 aa6.52□□□□□ -1.37
SNIP1-204ENST00000638725 SPAG11AQ6PDA7 123 aa6.52□□□□□ -1.37
SNIP1-204ENST00000638725 SPTSSBQ8NFR3 76 aa6.51□□□□□ -1.37
SNIP1-204ENST00000638725 PSORS1C2Q9UIG4 136 aa6.51□□□□□ -1.37
SNIP1-204ENST00000638725 ZNF706Q9Y5V0 76 aaPredicted RBP6.5□□□□□ -1.37
SNIP1-204ENST00000638725 DNAH8Q96JB1 4490 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms