RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 HERC1Q15751 4861 aa11.31□□□□□ -0.6
HLA-A-209ENST00000638375 H3BUT2 72 aa11.31□□□□□ -0.6
HLA-A-209ENST00000638375 LST1O00453 97 aa11.31□□□□□ -0.6
HLA-A-209ENST00000638375 C9orf153Q5TBE3 101 aa11.31□□□□□ -0.6
HLA-A-209ENST00000638375 C9orf118A6NHY6 69 aa11.3□□□□□ -0.6
HLA-A-209ENST00000638375 Q8NBF4 154 aa11.3□□□□□ -0.6
HLA-A-209ENST00000638375 OCIAD2Q56VL3 154 aa11.29□□□□□ -0.6
HLA-A-209ENST00000638375 SSBP3-AS1Q7Z2R9 100 aa11.29□□□□□ -0.6
HLA-A-209ENST00000638375 LINC00304Q8N9R0 145 aa11.29□□□□□ -0.6
HLA-A-209ENST00000638375 PPDPFLQ8WWR9 84 aa11.29□□□□□ -0.6
HLA-A-209ENST00000638375 TCL1BO95988 128 aa11.28□□□□□ -0.6
HLA-A-209ENST00000638375 TRACP01848 142 aa11.28□□□□□ -0.6
HLA-A-209ENST00000638375 DNAL4O96015 105 aa11.27□□□□□ -0.61
HLA-A-209ENST00000638375 COL5A1-AS1Q5SY13 56 aa11.26□□□□□ -0.61
HLA-A-209ENST00000638375 LYRM7Q5U5X0 104 aa11.24□□□□□ -0.61
HLA-A-209ENST00000638375 ORMDL1Q9P0S3 153 aa11.24□□□□□ -0.61
HLA-A-209ENST00000638375 ATXN8Q156A1 80 aa11.23□□□□□ -0.61
HLA-A-209ENST00000638375 A0A1W2PPM0 123 aa11.22□□□□□ -0.61
HLA-A-209ENST00000638375 F8WEM9 126 aa11.21□□□□□ -0.61
HLA-A-209ENST00000638375 GHRHP01286 108 aa11.21□□□□□ -0.61
HLA-A-209ENST00000638375 FABP2P12104 132 aa11.21□□□□□ -0.61
HLA-A-209ENST00000638375 IGLV8-61A0A075B6I0 122 aa11.19□□□□□ -0.62
HLA-A-209ENST00000638375 A0A0G2JQZ4 141 aa11.19□□□□□ -0.62
HLA-A-209ENST00000638375 NDUFV3P56181 108 aaKnown RBP11.19□□□□□ -0.62
HLA-A-209ENST00000638375 SPAG11AQ6PDA7 123 aa11.19□□□□□ -0.62
HLA-A-209ENST00000638375 TRBV20-1A0A075B6N2 111 aa11.18□□□□□ -0.62
HLA-A-209ENST00000638375 C4orf48Q5BLP8 95 aa11.18□□□□□ -0.62
HLA-A-209ENST00000638375 H3BQ85 93 aa11.17□□□□□ -0.62
HLA-A-209ENST00000638375 TMEM256-PLSCR3K7ERE1 68 aa11.16□□□□□ -0.62
HLA-A-209ENST00000638375 SPINK1P00995 79 aa11.15□□□□□ -0.62
HLA-A-209ENST00000638375 IGFL1Q6UW32 110 aa11.14□□□□□ -0.63
HLA-A-209ENST00000638375 BAALC-AS2P0C853 105 aa11.13□□□□□ -0.63
HLA-A-209ENST00000638375 Q6JHZ5 121 aa11.13□□□□□ -0.63
HLA-A-209ENST00000638375 HRCT1Q6UXD1 115 aa11.13□□□□□ -0.63
HLA-A-209ENST00000638375 H3BMG7 143 aa11.12□□□□□ -0.63
HLA-A-209ENST00000638375 UBE2V1Q13404 147 aa11.12□□□□□ -0.63
HLA-A-209ENST00000638375 CD164Q04900 197 aa11.11□□□□□ -0.63
HLA-A-209ENST00000638375 SPCS1Q9Y6A9 102 aa11.11□□□□□ -0.63
HLA-A-209ENST00000638375 RPS29P62273 56 aaKnown RBP11.1□□□□□ -0.63
HLA-A-209ENST00000638375 HMCN2Q8NDA2 5059 aa11.09□□□□□ -0.63
HLA-A-209ENST00000638375 A0A1B0GV72 72 aa11.09□□□□□ -0.63
HLA-A-209ENST00000638375 C9JAW5 83 aa11.09□□□□□ -0.63
HLA-A-209ENST00000638375 ANKRD29Q8N6D5 301 aa11.07□□□□□ -0.64
HLA-A-209ENST00000638375 RETNLBQ9BQ08 111 aa11.06□□□□□ -0.64
HLA-A-209ENST00000638375 MTURNQ8N3F0 131 aa11.04□□□□□ -0.64
HLA-A-209ENST00000638375 K7EP34 96 aa11.03□□□□□ -0.64
HLA-A-209ENST00000638375 TRBV7-7A0A0K0K1E9 115 aa11.01□□□□□ -0.65
HLA-A-209ENST00000638375 LIMD2Q9BT23 127 aa11.01□□□□□ -0.65
HLA-A-209ENST00000638375 H3BT86 120 aa11□□□□□ -0.65
HLA-A-209ENST00000638375 TRBV7-4A0A0J9YYF1 115 aa10.99□□□□□ -0.65
HLA-A-209ENST00000638375 RBM3P98179 157 aaKnown RBP10.99□□□□□ -0.65
HLA-A-209ENST00000638375 PRR4Q16378 134 aa10.99□□□□□ -0.65
HLA-A-209ENST00000638375 Q5XG85 94 aa10.99□□□□□ -0.65
HLA-A-209ENST00000638375 Q6Q795 121 aa10.99□□□□□ -0.65
HLA-A-209ENST00000638375 A0A1W2PNM2 257 aa10.98□□□□□ -0.65
HLA-A-209ENST00000638375 TEN1Q86WV5 123 aa10.98□□□□□ -0.65
HLA-A-209ENST00000638375 JMJD7-PLA2G4BH0Y9G9 81 aa10.95□□□□□ -0.66
HLA-A-209ENST00000638375 SMCPP49901 116 aaPredicted RBP10.95□□□□□ -0.66
HLA-A-209ENST00000638375 PRO0461Q9UI25 63 aa10.95□□□□□ -0.66
HLA-A-209ENST00000638375 GTF2H5Q6ZYL4 71 aa10.94□□□□□ -0.66
HLA-A-209ENST00000638375 OBSCN-AS1Q96MR7 158 aa10.94□□□□□ -0.66
HLA-A-209ENST00000638375 DSCR8Q96T75 97 aa10.94□□□□□ -0.66
HLA-A-209ENST00000638375 CCKP06307 115 aa10.92□□□□□ -0.66
HLA-A-209ENST00000638375 FP248Q71RG6 208 aaPredicted RBP10.92□□□□□ -0.66
HLA-A-209ENST00000638375 IGLV7-46A0A075B6I9 117 aa10.9□□□□□ -0.66
HLA-A-209ENST00000638375 A0A087WSZ3 146 aa10.9□□□□□ -0.66
HLA-A-209ENST00000638375 C14orf132Q9NPU4 83 aa10.9□□□□□ -0.66
HLA-A-209ENST00000638375 ASB16-AS1Q495Z4 193 aa10.89□□□□□ -0.67
HLA-A-209ENST00000638375 C1orf195Q5TG92 126 aa10.89□□□□□ -0.67
HLA-A-209ENST00000638375 LOC110117498A0A087WWA1 95 aa10.88□□□□□ -0.67
HLA-A-209ENST00000638375 Q6ZQT0 140 aa10.88□□□□□ -0.67
HLA-A-209ENST00000638375 VPS25Q9BRG1 176 aa10.87□□□□□ -0.67
HLA-A-209ENST00000638375 LPAP08519 4548 aa10.87□□□□□ -0.67
HLA-A-209ENST00000638375 SS18L2Q9UHA2 77 aa10.85□□□□□ -0.67
HLA-A-209ENST00000638375 LRP2P98164 4655 aa10.84□□□□□ -0.67
HLA-A-209ENST00000638375 PDE6GP18545 87 aa10.83□□□□□ -0.68
HLA-A-209ENST00000638375 A0A1B0GV90 55 aa10.81□□□□□ -0.68
HLA-A-209ENST00000638375 F8W1H4 67 aa10.81□□□□□ -0.68
HLA-A-209ENST00000638375 TPRXLQ17RH7 258 aa10.8□□□□□ -0.68
HLA-A-209ENST00000638375 Q96NJ1 140 aa10.79□□□□□ -0.68
HLA-A-209ENST00000638375 KRTAP13-3Q3SY46 172 aa10.78□□□□□ -0.68
HLA-A-209ENST00000638375 A0A1B0GW54 56 aa10.74□□□□□ -0.69
HLA-A-209ENST00000638375 C21orf62-AS1Q17RA5 79 aa10.74□□□□□ -0.69
HLA-A-209ENST00000638375 ETDBQ3ZM63 59 aa10.72□□□□□ -0.69
HLA-A-209ENST00000638375 LINC00472Q9H8W2 130 aa10.72□□□□□ -0.69
HLA-A-209ENST00000638375 CDIP1Q9H305 208 aa10.69□□□□□ -0.7
HLA-A-209ENST00000638375 DEFB116Q30KQ4 102 aa10.68□□□□□ -0.7
HLA-A-209ENST00000638375 C9orf92A6NGG3 77 aa10.67□□□□□ -0.7
HLA-A-209ENST00000638375 IGKV4-1P06312 121 aa10.66□□□□□ -0.7
HLA-A-209ENST00000638375 SIGMAR1Q99720 223 aa10.65□□□□□ -0.7
HLA-A-209ENST00000638375 XP32Q5T750 250 aa10.62□□□□□ -0.71
HLA-A-209ENST00000638375 UBR4Q5T4S7 5183 aa10.62□□□□□ -0.71
HLA-A-209ENST00000638375 NREPQ16612 68 aa10.6□□□□□ -0.71
HLA-A-209ENST00000638375 MUC17Q685J3 4493 aa10.57□□□□□ -0.72
HLA-A-209ENST00000638375 J3KT08 172 aa10.57□□□□□ -0.72
HLA-A-209ENST00000638375 LINC00846Q9NV44 126 aa10.55□□□□□ -0.72
HLA-A-209ENST00000638375 Q6ZVQ6 151 aa10.54□□□□□ -0.72
HLA-A-209ENST00000638375 DSCR10P59022 87 aa10.53□□□□□ -0.72
HLA-A-209ENST00000638375 IGHV6-1A0A0B4J1U7 121 aa10.51□□□□□ -0.73
HLA-A-209ENST00000638375 A0A1B0GVX0 72 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms