RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 TRAV13-2A0A0B4J235 113 aa2.48□□□□□ -2.01
GABRA1-220ENST00000638159 DNAH5Q8TE73 4624 aa2.48□□□□□ -2.01
GABRA1-220ENST00000638159 A0A087X002 238 aa2.48□□□□□ -2.01
GABRA1-220ENST00000638159 F8W1H4 67 aa2.48□□□□□ -2.01
GABRA1-220ENST00000638159 CEND1Q8N111 149 aa2.48□□□□□ -2.01
GABRA1-220ENST00000638159 ERC2-IT1O76042 136 aa2.48□□□□□ -2.01
GABRA1-220ENST00000638159 TRBV27A0A0K0K1C4 114 aa2.47□□□□□ -2.01
GABRA1-220ENST00000638159 LEPROTO15243 131 aa2.47□□□□□ -2.01
GABRA1-220ENST00000638159 MRPS36P82909 103 aaKnown RBP2.47□□□□□ -2.01
GABRA1-220ENST00000638159 Q6JHZ5 121 aa2.47□□□□□ -2.01
GABRA1-220ENST00000638159 OBSCN-AS1Q96MR7 158 aa2.47□□□□□ -2.01
GABRA1-220ENST00000638159 POLR2KP53803 58 aaKnown RBP2.47□□□□□ -2.01
GABRA1-220ENST00000638159 SPANXB1Q9NS25 103 aaPredicted RBP2.47□□□□□ -2.01
GABRA1-220ENST00000638159 COX17Q14061 63 aa2.47□□□□□ -2.01
GABRA1-220ENST00000638159 KIAA0087Q14695 138 aa2.47□□□□□ -2.01
GABRA1-220ENST00000638159 A8MWP4 228 aa2.46□□□□□ -2.02
GABRA1-220ENST00000638159 IGIPA6NJ69 53 aa2.46□□□□□ -2.02
GABRA1-220ENST00000638159 RPS29P62273 56 aaKnown RBP2.46□□□□□ -2.02
GABRA1-220ENST00000638159 TOMM6Q96B49 74 aa2.46□□□□□ -2.02
GABRA1-220ENST00000638159 LRP1BQ9NZR2 4599 aa2.46□□□□□ -2.02
GABRA1-220ENST00000638159 TEX49A0A1B0GTD5 131 aa2.46□□□□□ -2.02
GABRA1-220ENST00000638159 E9PLD3 99 aa2.46□□□□□ -2.02
GABRA1-220ENST00000638159 SCGB1A1P11684 91 aa2.46□□□□□ -2.02
GABRA1-220ENST00000638159 SOSTDC1Q6X4U4 206 aa2.46□□□□□ -2.02
GABRA1-220ENST00000638159 B5MCH6 92 aa2.45□□□□□ -2.02
GABRA1-220ENST00000638159 DNAL4O96015 105 aa2.45□□□□□ -2.02
GABRA1-220ENST00000638159 RPL39P62891 51 aaKnown RBP2.45□□□□□ -2.02
GABRA1-220ENST00000638159 KRTAP20-1Q3LI63 56 aa2.45□□□□□ -2.02
GABRA1-220ENST00000638159 ANAPC13Q9BS18 74 aa2.45□□□□□ -2.02
GABRA1-220ENST00000638159 HERC1Q15751 4861 aa2.45□□□□□ -2.02
GABRA1-220ENST00000638159 STARD9Q9P2P6 4700 aa2.45□□□□□ -2.02
GABRA1-220ENST00000638159 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.45□□□□□ -2.02
GABRA1-220ENST00000638159 LITAFQ99732 161 aa2.45□□□□□ -2.02
GABRA1-220ENST00000638159 TRAV23DV6A0A075B6W5 121 aa2.45□□□□□ -2.02
GABRA1-220ENST00000638159 KRTAP13-3Q3SY46 172 aa2.44□□□□□ -2.02
GABRA1-220ENST00000638159 A0A0J9YXY3 114 aa2.44□□□□□ -2.02
GABRA1-220ENST00000638159 TIMM17BO60830 172 aa2.44□□□□□ -2.02
GABRA1-220ENST00000638159 PPDPFLQ8WWR9 84 aa2.44□□□□□ -2.02
GABRA1-220ENST00000638159 CDKN2A-AS1Q9UH64 79 aa2.44□□□□□ -2.02
GABRA1-220ENST00000638159 A6NN06 94 aa2.43□□□□□ -2.02
GABRA1-220ENST00000638159 C9JAW5 83 aa2.43□□□□□ -2.02
GABRA1-220ENST00000638159 J3QQQ9 107 aa2.43□□□□□ -2.02
GABRA1-220ENST00000638159 KRTAP10-4P60372 401 aaPredicted RBP2.43□□□□□ -2.02
GABRA1-220ENST00000638159 SND1-IT1Q9HBX3 110 aa2.43□□□□□ -2.02
GABRA1-220ENST00000638159 IGLV5-39A0A0G2JS06 123 aa2.43□□□□□ -2.02
GABRA1-220ENST00000638159 MT-ATP8P03928 68 aa2.43□□□□□ -2.02
GABRA1-220ENST00000638159 RPL37P61927 97 aaKnown RBP2.43□□□□□ -2.02
GABRA1-220ENST00000638159 XP32Q5T750 250 aa2.43□□□□□ -2.02
GABRA1-220ENST00000638159 MIR7-3HGQ8N6C7 128 aa2.43□□□□□ -2.02
GABRA1-220ENST00000638159 KRTAP3-1Q9BYR8 98 aa2.43□□□□□ -2.02
GABRA1-220ENST00000638159 TEN1Q86WV5 123 aa2.43□□□□□ -2.02
GABRA1-220ENST00000638159 FAT1Q14517 4588 aa2.43□□□□□ -2.02
GABRA1-220ENST00000638159 ATXN8Q156A1 80 aa2.42□□□□□ -2.02
GABRA1-220ENST00000638159 ST20-AS1Q8NBB2 130 aa2.42□□□□□ -2.02
GABRA1-220ENST00000638159 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
GABRA1-220ENST00000638159 PRO0461Q9UI25 63 aa2.42□□□□□ -2.02
GABRA1-220ENST00000638159 CD164Q04900 197 aa2.42□□□□□ -2.02
GABRA1-220ENST00000638159 PRO1854Q9UHT4 67 aa2.42□□□□□ -2.02
GABRA1-220ENST00000638159 NPC2P61916 151 aa2.42□□□□□ -2.02
GABRA1-220ENST00000638159 ANKRD29Q8N6D5 301 aa2.42□□□□□ -2.02
GABRA1-220ENST00000638159 A4D1N5 150 aa2.42□□□□□ -2.02
GABRA1-220ENST00000638159 C11orf86A6NJI1 115 aa2.42□□□□□ -2.02
GABRA1-220ENST00000638159 C9orf129Q5T035 196 aaKnown RBP2.42□□□□□ -2.02
GABRA1-220ENST00000638159 DYNC1H1Q14204 4646 aaKnown RBP2.41□□□□□ -2.02
GABRA1-220ENST00000638159 TRBV10-3A0A0K0K1G6 114 aa2.41□□□□□ -2.02
GABRA1-220ENST00000638159 IGFL1Q6UW32 110 aa2.41□□□□□ -2.02
GABRA1-220ENST00000638159 KRTAP1-4P0C5Y4 121 aa2.41□□□□□ -2.02
GABRA1-220ENST00000638159 KRTAP26-1Q6PEX3 210 aa2.41□□□□□ -2.02
GABRA1-220ENST00000638159 SPANXDQ9BXN6 97 aa2.41□□□□□ -2.02
GABRA1-220ENST00000638159 SPANXCQ9NY87 97 aa2.41□□□□□ -2.02
GABRA1-220ENST00000638159 IGLV4-3A0A075B6K6 122 aa2.4□□□□□ -2.02
GABRA1-220ENST00000638159 LINC00313P59037 77 aa2.4□□□□□ -2.02
GABRA1-220ENST00000638159 A0A0A0MQY5 61 aa2.4□□□□□ -2.03
GABRA1-220ENST00000638159 IFITM1P13164 125 aa2.4□□□□□ -2.03
GABRA1-220ENST00000638159 TINCRA0A1B0GVN0 87 aa2.4□□□□□ -2.03
GABRA1-220ENST00000638159 MUSTN1Q8IVN3 82 aa2.39□□□□□ -2.03
GABRA1-220ENST00000638159 KRTAP11-1Q8IUC1 163 aa2.39□□□□□ -2.03
GABRA1-220ENST00000638159 Q8NDZ9 215 aa2.39□□□□□ -2.03
GABRA1-220ENST00000638159 TRACP01848 142 aa2.38□□□□□ -2.03
GABRA1-220ENST00000638159 TSPEAR-AS2P59090 65 aa2.38□□□□□ -2.03
GABRA1-220ENST00000638159 SMIM20Q8N5G0 67 aa2.38□□□□□ -2.03
GABRA1-220ENST00000638159 NDUFV3P56181 108 aaKnown RBP2.38□□□□□ -2.03
GABRA1-220ENST00000638159 KRTAP13-2Q52LG2 175 aa2.38□□□□□ -2.03
GABRA1-220ENST00000638159 ZNF22P17026 224 aaPredicted RBP2.38□□□□□ -2.03
GABRA1-220ENST00000638159 TRBV10-2A0A0K0K1G8 114 aa2.37□□□□□ -2.03
GABRA1-220ENST00000638159 hADV29S1A0JD25 119 aa2.37□□□□□ -2.03
GABRA1-220ENST00000638159 KRTAP10-6P60371 365 aaPredicted RBP2.37□□□□□ -2.03
GABRA1-220ENST00000638159 IGHV6-1A0A0B4J1U7 121 aa2.37□□□□□ -2.03
GABRA1-220ENST00000638159 TRIAP1O43715 76 aa2.37□□□□□ -2.03
GABRA1-220ENST00000638159 CLEC2BQ92478 149 aa2.37□□□□□ -2.03
GABRA1-220ENST00000638159 A0A0B4J2C4 111 aa2.37□□□□□ -2.03
GABRA1-220ENST00000638159 TMEM223A0PJW6 202 aa2.37□□□□□ -2.03
GABRA1-220ENST00000638159 CCDC179H3BU77 68 aa2.37□□□□□ -2.03
GABRA1-220ENST00000638159 IGKV4-1P06312 121 aa2.37□□□□□ -2.03
GABRA1-220ENST00000638159 Q6ZRX8 168 aa2.37□□□□□ -2.03
GABRA1-220ENST00000638159 KRTAP23-1A1A580 65 aa2.36□□□□□ -2.03
GABRA1-220ENST00000638159 PRO2289Q9P1D8 64 aa2.36□□□□□ -2.03
GABRA1-220ENST00000638159 Q8N9P0 234 aaPredicted RBP2.36□□□□□ -2.03
GABRA1-220ENST00000638159 MUC17Q685J3 4493 aa2.36□□□□□ -2.03
GABRA1-220ENST00000638159 RNF213Q63HN8 5207 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms