RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ZNF575Q86XF7 245 aa9.63□□□□□ -0.87
UBE3A-227ENST00000638011 DNAH12Q6ZR08 3092 aa9.62□□□□□ -0.87
UBE3A-227ENST00000638011 PSORS1C2Q9UIG4 136 aa9.62□□□□□ -0.87
UBE3A-227ENST00000638011 C19orf73Q9NVV2 129 aa9.61□□□□□ -0.87
UBE3A-227ENST00000638011 KRTAP10-9P60411 292 aa9.6□□□□□ -0.87
UBE3A-227ENST00000638011 PRAC1Q96KF2 57 aa9.6□□□□□ -0.87
UBE3A-227ENST00000638011 RPL37P61927 97 aaKnown RBP9.59□□□□□ -0.87
UBE3A-227ENST00000638011 WWC2-AS2Q96NR7 200 aa9.57□□□□□ -0.88
UBE3A-227ENST00000638011 A0A087WTM6 91 aa9.57□□□□□ -0.88
UBE3A-227ENST00000638011 NBEAL2Q6ZNJ1 2754 aa9.56□□□□□ -0.88
UBE3A-227ENST00000638011 UBR5O95071 2799 aaPredicted RBP9.56□□□□□ -0.88
UBE3A-227ENST00000638011 S4R3F8 94 aa9.54□□□□□ -0.88
UBE3A-227ENST00000638011 GIG44P09565 113 aaPredicted RBP9.54□□□□□ -0.88
UBE3A-227ENST00000638011 Q6ZSA8 131 aa9.52□□□□□ -0.89
UBE3A-227ENST00000638011 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.52□□□□□ -0.89
UBE3A-227ENST00000638011 ZCCHC13Q8WW36 166 aaKnown RBP9.5□□□□□ -0.89
UBE3A-227ENST00000638011 A0A0C4DFX4 3053 aa9.49□□□□□ -0.89
UBE3A-227ENST00000638011 MMP24-AS1A0A0U1RRL7 71 aa9.49□□□□□ -0.89
UBE3A-227ENST00000638011 R4GN34 69 aa9.48□□□□□ -0.89
UBE3A-227ENST00000638011 A0A087X002 238 aa9.47□□□□□ -0.89
UBE3A-227ENST00000638011 A0A0G2JQZ4 141 aa9.46□□□□□ -0.9
UBE3A-227ENST00000638011 A0A1W2PNN7 141 aa9.46□□□□□ -0.9
UBE3A-227ENST00000638011 DSPP15924 2871 aaKnown RBP9.45□□□□□ -0.9
UBE3A-227ENST00000638011 LRBAP50851 2863 aa9.44□□□□□ -0.9
UBE3A-227ENST00000638011 LAMA2P24043 3122 aaKnown RBP9.41□□□□□ -0.9
UBE3A-227ENST00000638011 LINC00472Q9H8W2 130 aa9.41□□□□□ -0.9
UBE3A-227ENST00000638011 CYSTM1Q9H1C7 97 aa9.41□□□□□ -0.9
UBE3A-227ENST00000638011 Q5W150 140 aa9.41□□□□□ -0.9
UBE3A-227ENST00000638011 A0A096LNT2 108 aa9.39□□□□□ -0.91
UBE3A-227ENST00000638011 Q6ZR54 194 aa9.39□□□□□ -0.91
UBE3A-227ENST00000638011 SEC61BP60468 96 aaKnown RBP9.38□□□□□ -0.91
UBE3A-227ENST00000638011 H1FX-AS1Q4G0G2 97 aa9.38□□□□□ -0.91
UBE3A-227ENST00000638011 TRANK1O15050 2925 aa9.38□□□□□ -0.91
UBE3A-227ENST00000638011 ANAPC11Q9NYG5 84 aa9.38□□□□□ -0.91
UBE3A-227ENST00000638011 SPRR1AP35321 89 aa9.36□□□□□ -0.91
UBE3A-227ENST00000638011 SPATA8Q6RVD6 105 aa9.36□□□□□ -0.91
UBE3A-227ENST00000638011 FRYLO94915 3013 aa9.34□□□□□ -0.91
UBE3A-227ENST00000638011 C5orf42Q9H799 3197 aa9.34□□□□□ -0.91
UBE3A-227ENST00000638011 SPRR1BP22528 89 aa9.33□□□□□ -0.92
UBE3A-227ENST00000638011 OXTP01178 125 aa9.29□□□□□ -0.92
UBE3A-227ENST00000638011 KRTAP25-1Q3LHN0 102 aa9.29□□□□□ -0.92
UBE3A-227ENST00000638011 CHD9Q3L8U1 2897 aa9.27□□□□□ -0.93
UBE3A-227ENST00000638011 KRTAP24-1Q3LI83 254 aa9.27□□□□□ -0.93
UBE3A-227ENST00000638011 A6NN06 94 aa9.26□□□□□ -0.93
UBE3A-227ENST00000638011 K7EIL1 84 aa9.26□□□□□ -0.93
UBE3A-227ENST00000638011 GOLGB1Q14789 3259 aaKnown RBP9.22□□□□□ -0.93
UBE3A-227ENST00000638011 KRTAP10-11P60412 298 aa9.22□□□□□ -0.93
UBE3A-227ENST00000638011 M0R2T5 61 aa9.21□□□□□ -0.93
UBE3A-227ENST00000638011 PLAC8Q9NZF1 115 aa9.19□□□□□ -0.94
UBE3A-227ENST00000638011 PLAC4Q8WY50 150 aa9.19□□□□□ -0.94
UBE3A-227ENST00000638011 FRYQ5TBA9 3013 aa9.18□□□□□ -0.94
UBE3A-227ENST00000638011 UTRNP46939 3433 aa9.17□□□□□ -0.94
UBE3A-227ENST00000638011 PANO1I0J062 215 aa9.15□□□□□ -0.94
UBE3A-227ENST00000638011 M0QZ58 72 aa9.15□□□□□ -0.94
UBE3A-227ENST00000638011 SMR3BP02814 79 aaPredicted RBP9.11□□□□□ -0.95
UBE3A-227ENST00000638011 MGAQ8IWI9 3026 aa9.11□□□□□ -0.95
UBE3A-227ENST00000638011 KALRNO60229 2985 aa9.1□□□□□ -0.95
UBE3A-227ENST00000638011 ASH1LQ9NR48 2969 aaKnown RBP9.1□□□□□ -0.95
UBE3A-227ENST00000638011 NDUFAF8A1L188 74 aa9.1□□□□□ -0.95
UBE3A-227ENST00000638011 CASC10Q5T4H9 136 aa9.09□□□□□ -0.95
UBE3A-227ENST00000638011 TRIOO75962 3097 aa9.09□□□□□ -0.95
UBE3A-227ENST00000638011 VPS13AQ96RL7 3174 aa9.09□□□□□ -0.95
UBE3A-227ENST00000638011 KRTAP26-1Q6PEX3 210 aa9.09□□□□□ -0.96
UBE3A-227ENST00000638011 NF1P21359 2839 aa9.07□□□□□ -0.96
UBE3A-227ENST00000638011 TENM3Q9P273 2699 aa9.07□□□□□ -0.96
UBE3A-227ENST00000638011 CHD7Q9P2D1 2997 aa9.04□□□□□ -0.96
UBE3A-227ENST00000638011 Q8NDZ9 215 aa9.04□□□□□ -0.96
UBE3A-227ENST00000638011 LCE6AA0A183 80 aa9.03□□□□□ -0.96
UBE3A-227ENST00000638011 KRTAP29-1A8MX34 341 aaPredicted RBP9.03□□□□□ -0.96
UBE3A-227ENST00000638011 ADM2Q7Z4H4 148 aa8.99□□□□□ -0.97
UBE3A-227ENST00000638011 C20orf166-AS1Q96NR2 134 aa8.98□□□□□ -0.97
UBE3A-227ENST00000638011 TENM1Q9UKZ4 2725 aa8.96□□□□□ -0.97
UBE3A-227ENST00000638011 NIPBLQ6KC79 2804 aaeCLIP8.95□□□□□ -0.988e-8■■■■■ 41.9
UBE3A-227ENST00000638011 PP632Q6XCG6 107 aa8.95□□□□□ -0.98
UBE3A-227ENST00000638011 FLNCQ14315 2725 aa8.94□□□□□ -0.98
UBE3A-227ENST00000638011 RPS29P62273 56 aaKnown RBP8.93□□□□□ -0.98
UBE3A-227ENST00000638011 CELSR2Q9HCU4 2923 aa8.93□□□□□ -0.98
UBE3A-227ENST00000638011 PDZD2O15018 2839 aa8.92□□□□□ -0.98
UBE3A-227ENST00000638011 TACC2O95359 2948 aa8.92□□□□□ -0.98
UBE3A-227ENST00000638011 COL12A1Q99715 3063 aa8.9□□□□□ -0.98
UBE3A-227ENST00000638011 HIVEP1P15822 2718 aa8.89□□□□□ -0.99
UBE3A-227ENST00000638011 KRTAP4-16G5E9R7 235 aaPredicted RBP8.88□□□□□ -0.99
UBE3A-227ENST00000638011 CRYBG3Q68DQ2 2970 aa8.88□□□□□ -0.99
UBE3A-227ENST00000638011 PRUNE2Q8WUY3 3088 aa8.87□□□□□ -0.99
UBE3A-227ENST00000638011 FREM2Q5SZK8 3169 aa8.87□□□□□ -0.99
UBE3A-227ENST00000638011 KRTAP10-3P60369 221 aa8.85□□□□□ -0.99
UBE3A-227ENST00000638011 TGP01266 2768 aa8.84□□□□□ -0.99
UBE3A-227ENST00000638011 NBEAQ8NFP9 2946 aa8.8□□□□□ -1
UBE3A-227ENST00000638011 WDFY4Q6ZS81 3184 aa8.79□□□□□ -1
UBE3A-227ENST00000638011 KRTAP11-1Q8IUC1 163 aa8.79□□□□□ -1
UBE3A-227ENST00000638011 A8MUU9 505 aa8.78□□□□□ -1
UBE3A-227ENST00000638011 DMXL2Q8TDJ6 3036 aa8.77□□□□□ -1.01
UBE3A-227ENST00000638011 TNP1P09430 55 aa8.76□□□□□ -1.01
UBE3A-227ENST00000638011 SRRM2Q9UQ35 2752 aaKnown RBP8.74□□□□□ -1.01
UBE3A-227ENST00000638011 REV3LO60673 3130 aa8.73□□□□□ -1.01
UBE3A-227ENST00000638011 NOTCH2NLQ7Z3S9 236 aa8.7□□□□□ -1.02
UBE3A-227ENST00000638011 TNRC18O15417 2968 aaPredicted RBP8.68□□□□□ -1.02
UBE3A-227ENST00000638011 C10orf95Q9H7T3 257 aa8.67□□□□□ -1.02
UBE3A-227ENST00000638011 RANBP2P49792 3224 aaKnown RBP8.65□□□□□ -1.02
UBE3A-227ENST00000638011 LAMA1P25391 3075 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms