RNA–Protein interactions for RNA: ENST00000637573.1

KCNQ2-238, Transcript of potassium voltage-gated channel subfamily Q member 2, human

TSL 5

Gene KCNQ2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNQ2-238	ENST00000637573	CSMD1	Q96PZ7	3565 aa		4.18	□□□□□ -1.74
KCNQ2-238	ENST00000637573		A0A1B0GU33	70 aa		4.17	□□□□□ -1.74
KCNQ2-238	ENST00000637573	KRTAP11-1	Q8IUC1	163 aa		4.17	□□□□□ -1.74
KCNQ2-238	ENST00000637573	MYO15A	Q9UKN7	3530 aa		4.17	□□□□□ -1.74
KCNQ2-238	ENST00000637573	FN1	P02751	2386 aa	Known RBP	4.17	□□□□□ -1.74
KCNQ2-238	ENST00000637573	KRTAP16-1	A8MUX0	517 aa		4.16	□□□□□ -1.74
KCNQ2-238	ENST00000637573	KRTAP1-1	Q07627	177 aa		4.16	□□□□□ -1.74
KCNQ2-238	ENST00000637573	ITPR1	Q14643	2758 aa		4.15	□□□□□ -1.74
KCNQ2-238	ENST00000637573	CEP295	Q9C0D2	2601 aa		4.15	□□□□□ -1.74
KCNQ2-238	ENST00000637573	KMT2B	Q9UMN6	2715 aa	Predicted RBP	4.15	□□□□□ -1.75
KCNQ2-238	ENST00000637573	KRTAP10-9	P60411	292 aa		4.15	□□□□□ -1.75
KCNQ2-238	ENST00000637573		A0A0A0MQY5	61 aa		4.14	□□□□□ -1.75
KCNQ2-238	ENST00000637573		P0C880	135 aa		4.14	□□□□□ -1.75
KCNQ2-238	ENST00000637573	H1FX-AS1	Q4G0G2	97 aa		4.14	□□□□□ -1.75
KCNQ2-238	ENST00000637573	SPINK6	Q6UWN8	80 aa		4.14	□□□□□ -1.75
KCNQ2-238	ENST00000637573		Q6ZSA8	131 aa		4.14	□□□□□ -1.75
KCNQ2-238	ENST00000637573	HIVEP2	P31629	2446 aa		4.14	□□□□□ -1.75
KCNQ2-238	ENST00000637573	ZFHX4	Q86UP3	3567 aa		4.14	□□□□□ -1.75
KCNQ2-238	ENST00000637573		H0YAA0	97 aa		4.13	□□□□□ -1.75
KCNQ2-238	ENST00000637573	SPINT4	Q6UDR6	99 aa		4.13	□□□□□ -1.75
KCNQ2-238	ENST00000637573	COX6B2	Q6YFQ2	88 aa		4.13	□□□□□ -1.75
KCNQ2-238	ENST00000637573	SPEN	Q96T58	3664 aa	Known RBP	4.13	□□□□□ -1.75
KCNQ2-238	ENST00000637573	PTPN13	Q12923	2485 aa		4.12	□□□□□ -1.75
KCNQ2-238	ENST00000637573	C20orf166-AS1	Q96NR2	134 aa		4.12	□□□□□ -1.75
KCNQ2-238	ENST00000637573	LOC400499	M0QZD8	3231 aa		4.12	□□□□□ -1.75
KCNQ2-238	ENST00000637573	BSN	Q9UPA5	3926 aa		4.11	□□□□□ -1.75
KCNQ2-238	ENST00000637573	JMJD1C	Q15652	2540 aa		4.1	□□□□□ -1.75
KCNQ2-238	ENST00000637573	SPACA4	Q8TDM5	124 aa		4.1	□□□□□ -1.75
KCNQ2-238	ENST00000637573	MYO9A	B2RTY4	2548 aa		4.1	□□□□□ -1.75
KCNQ2-238	ENST00000637573	DOPEY1	Q5JWR5	2465 aa		4.09	□□□□□ -1.75
KCNQ2-238	ENST00000637573	CHD6	Q8TD26	2715 aa		4.08	□□□□□ -1.76
KCNQ2-238	ENST00000637573	CELSR1	Q9NYQ6	3014 aa		4.08	□□□□□ -1.76
KCNQ2-238	ENST00000637573	DMXL1	Q9Y485	3027 aa		4.07	□□□□□ -1.76
KCNQ2-238	ENST00000637573	ANKRD17	O75179	2603 aa	Known RBP	4.07	□□□□□ -1.76
KCNQ2-238	ENST00000637573	UBE2DNL	Q8IWF7	75 aa		4.07	□□□□□ -1.76
KCNQ2-238	ENST00000637573	PSORS1C2	Q9UIG4	136 aa		4.07	□□□□□ -1.76
KCNQ2-238	ENST00000637573	RIF1	Q5UIP0	2472 aa	Known RBP	4.07	□□□□□ -1.76
KCNQ2-238	ENST00000637573	SPTBN4	Q9H254	2564 aa		4.07	□□□□□ -1.76
KCNQ2-238	ENST00000637573	SETX	Q7Z333	2677 aa	Known RBP	4.06	□□□□□ -1.76
KCNQ2-238	ENST00000637573		A0A087WTM6	91 aa		4.06	□□□□□ -1.76
KCNQ2-238	ENST00000637573	CIRBP-AS1	Q8TBR5	109 aa		4.06	□□□□□ -1.76
KCNQ2-238	ENST00000637573	ASH1L	Q9NR48	2969 aa	Known RBP	4.05	□□□□□ -1.76
KCNQ2-238	ENST00000637573	USP9X	Q93008	2570 aa	Predicted RBP	4.05	□□□□□ -1.76
KCNQ2-238	ENST00000637573	SPINK1	P00995	79 aa		4.04	□□□□□ -1.76
KCNQ2-238	ENST00000637573	RPL37	P61927	97 aa	Known RBP	4.04	□□□□□ -1.76
KCNQ2-238	ENST00000637573	KRTAP15-1	Q3LI76	137 aa		4.04	□□□□□ -1.76
KCNQ2-238	ENST00000637573	ZFYVE26	Q68DK2	2539 aa		4.04	□□□□□ -1.76
KCNQ2-238	ENST00000637573	BDP1	A6H8Y1	2624 aa		4.03	□□□□□ -1.76
KCNQ2-238	ENST00000637573	ZNF292	O60281	2723 aa		4.03	□□□□□ -1.76
KCNQ2-238	ENST00000637573	CELSR2	Q9HCU4	2923 aa		4.03	□□□□□ -1.76
KCNQ2-238	ENST00000637573	BOD1L1	Q8NFC6	3051 aa		4.03	□□□□□ -1.76
KCNQ2-238	ENST00000637573	USP9Y	O00507	2555 aa	Predicted RBP	4.03	□□□□□ -1.77
KCNQ2-238	ENST00000637573	NDUFAF8	A1L188	74 aa		4.02	□□□□□ -1.77
KCNQ2-238	ENST00000637573	KRTAP10-11	P60412	298 aa		4.02	□□□□□ -1.77
KCNQ2-238	ENST00000637573	CRIPT	Q9P021	101 aa		4.02	□□□□□ -1.77
KCNQ2-238	ENST00000637573	TENM2	Q9NT68	2774 aa		4.02	□□□□□ -1.77
KCNQ2-238	ENST00000637573	APC	P25054	2843 aa		4.01	□□□□□ -1.77
KCNQ2-238	ENST00000637573	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4	□□□□□ -1.77
KCNQ2-238	ENST00000637573	EYS	Q5T1H1	3165 aa		3.99	□□□□□ -1.77
KCNQ2-238	ENST00000637573	NBDY	A0A0U1RRE5	68 aa		3.98	□□□□□ -1.77
KCNQ2-238	ENST00000637573	KRTAP1-5	Q9BYS1	174 aa		3.98	□□□□□ -1.77
KCNQ2-238	ENST00000637573	F8	P00451	2351 aa		3.98	□□□□□ -1.77
KCNQ2-238	ENST00000637573	NAV2	Q8IVL1	2488 aa		3.97	□□□□□ -1.77
KCNQ2-238	ENST00000637573	APLN	Q9ULZ1	77 aa		3.97	□□□□□ -1.77
KCNQ2-238	ENST00000637573	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	3.97	□□□□□ -1.77
KCNQ2-238	ENST00000637573		Q8N1X5	172 aa		3.96	□□□□□ -1.78
KCNQ2-238	ENST00000637573	TYMSOS	Q8TAI1	123 aa		3.96	□□□□□ -1.78
KCNQ2-238	ENST00000637573	ATM	Q13315	3056 aa		3.95	□□□□□ -1.78
KCNQ2-238	ENST00000637573	RPS29	P62273	56 aa	Known RBP	3.95	□□□□□ -1.78
KCNQ2-238	ENST00000637573	COL12A1	Q99715	3063 aa		3.94	□□□□□ -1.78
KCNQ2-238	ENST00000637573	UTP20	O75691	2785 aa	Known RBP	3.94	□□□□□ -1.78
KCNQ2-238	ENST00000637573	MXRA5	Q9NR99	2828 aa		3.94	□□□□□ -1.78
KCNQ2-238	ENST00000637573	LUZP6	Q538Z0	58 aa		3.94	□□□□□ -1.78
KCNQ2-238	ENST00000637573		Q6ZRN7	208 aa	Predicted RBP	3.94	□□□□□ -1.78
KCNQ2-238	ENST00000637573	AKAP9	Q99996	3911 aa		3.93	□□□□□ -1.78
KCNQ2-238	ENST00000637573	LRRK2	Q5S007	2527 aa		3.93	□□□□□ -1.78
KCNQ2-238	ENST00000637573	MUC6	Q6W4X9	2439 aa		3.93	□□□□□ -1.78
KCNQ2-238	ENST00000637573	GCN1	Q92616	2671 aa	Known RBP	3.93	□□□□□ -1.78
KCNQ2-238	ENST00000637573	TPRXL	Q17RH7	258 aa		3.93	□□□□□ -1.78
KCNQ2-238	ENST00000637573	NBPF19	A0A087WUL8	3843 aa		3.93	□□□□□ -1.78
KCNQ2-238	ENST00000637573	ASPM	Q8IZT6	3477 aa		3.93	□□□□□ -1.78
KCNQ2-238	ENST00000637573	IGF2R	P11717	2491 aa		3.93	□□□□□ -1.78
KCNQ2-238	ENST00000637573	SEC61B	P60468	96 aa	Known RBP	3.92	□□□□□ -1.78
KCNQ2-238	ENST00000637573	SON	P18583	2426 aa	Known RBP	3.92	□□□□□ -1.78
KCNQ2-238	ENST00000637573	CHD8	Q9HCK8	2581 aa		3.92	□□□□□ -1.78
KCNQ2-238	ENST00000637573	TTC28	Q96AY4	2481 aa		3.91	□□□□□ -1.78
KCNQ2-238	ENST00000637573	TEX15	Q9BXT5	2789 aa		3.91	□□□□□ -1.78
KCNQ2-238	ENST00000637573	EPG5	Q9HCE0	2579 aa		3.91	□□□□□ -1.78
KCNQ2-238	ENST00000637573	PIEZO1	Q92508	2521 aa		3.9	□□□□□ -1.78
KCNQ2-238	ENST00000637573	CRYBG3	Q68DQ2	2970 aa		3.88	□□□□□ -1.79
KCNQ2-238	ENST00000637573	NBEAL2	Q6ZNJ1	2754 aa		3.88	□□□□□ -1.79
KCNQ2-238	ENST00000637573	KRTAP24-1	Q3LI83	254 aa		3.88	□□□□□ -1.79
KCNQ2-238	ENST00000637573	PKD1L2	Q7Z442	2459 aa		3.87	□□□□□ -1.79
KCNQ2-238	ENST00000637573	UNC79	Q9P2D8	2635 aa		3.87	□□□□□ -1.79
KCNQ2-238	ENST00000637573	SVEP1	Q4LDE5	3571 aa		3.87	□□□□□ -1.79
KCNQ2-238	ENST00000637573	ACACB	O00763	2458 aa		3.87	□□□□□ -1.79
KCNQ2-238	ENST00000637573	MTOR	P42345	2549 aa		3.86	□□□□□ -1.79
KCNQ2-238	ENST00000637573	DNAH1	Q9P2D7	4330 aa		3.85	□□□□□ -1.79
KCNQ2-238	ENST00000637573	KRTAP13-2	Q52LG2	175 aa		3.85	□□□□□ -1.79
KCNQ2-238	ENST00000637573	SMR3A	Q99954	134 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms