RNA–Protein interactions for RNA: ENST00000637266.2

SCN2A-215, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,610 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-215ENST00000637266 FLNAP21333 2647 aaKnown RBP4.17□□□□□ -1.74
SCN2A-215ENST00000637266 A6NN06 94 aa4.15□□□□□ -1.75
SCN2A-215ENST00000637266 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
SCN2A-215ENST00000637266 A0A0G2JQZ4 141 aa4.14□□□□□ -1.75
SCN2A-215ENST00000637266 KRTAP16-1A8MUX0 517 aa4.13□□□□□ -1.75
SCN2A-215ENST00000637266 KRTAP25-1Q3LHN0 102 aa4.12□□□□□ -1.75
SCN2A-215ENST00000637266 MAST4O15021 2626 aa4.11□□□□□ -1.75
SCN2A-215ENST00000637266 Q8NDZ9 215 aa4.1□□□□□ -1.75
SCN2A-215ENST00000637266 M0R2T5 61 aa4.09□□□□□ -1.75
SCN2A-215ENST00000637266 SMR3BP02814 79 aaPredicted RBP4.09□□□□□ -1.75
SCN2A-215ENST00000637266 MGAM2Q2M2H8 2515 aa4.08□□□□□ -1.76
SCN2A-215ENST00000637266 CYSTM1Q9H1C7 97 aa4.08□□□□□ -1.76
SCN2A-215ENST00000637266 KMT2BQ9UMN6 2715 aaPredicted RBP4.08□□□□□ -1.76
SCN2A-215ENST00000637266 ATRQ13535 2644 aa4.07□□□□□ -1.76
SCN2A-215ENST00000637266 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
SCN2A-215ENST00000637266 HELZ2Q9BYK8 2649 aaKnown RBP4.06□□□□□ -1.76
SCN2A-215ENST00000637266 KRTAP21-3Q3LHN1 58 aa4.06□□□□□ -1.76
SCN2A-215ENST00000637266 Q5VSD8 79 aa4.06□□□□□ -1.76
SCN2A-215ENST00000637266 ITPR3Q14573 2671 aa4.05□□□□□ -1.76
SCN2A-215ENST00000637266 KRTAP13-1Q8IUC0 172 aa4.05□□□□□ -1.76
SCN2A-215ENST00000637266 USP24Q9UPU5 2620 aa4.04□□□□□ -1.76
SCN2A-215ENST00000637266 FLNBO75369 2602 aaKnown RBP4.04□□□□□ -1.76
SCN2A-215ENST00000637266 STAB1Q9NY15 2570 aa4.03□□□□□ -1.76
SCN2A-215ENST00000637266 ADM2Q7Z4H4 148 aa4.03□□□□□ -1.76
SCN2A-215ENST00000637266 FLG2Q5D862 2391 aaPredicted RBP4.02□□□□□ -1.77
SCN2A-215ENST00000637266 HECTD1Q9ULT8 2610 aa4.02□□□□□ -1.77
SCN2A-215ENST00000637266 NBEAL1Q6ZS30 2694 aa4.02□□□□□ -1.77
SCN2A-215ENST00000637266 TNP1P09430 55 aa4.01□□□□□ -1.77
SCN2A-215ENST00000637266 KRTAP1-5Q9BYS1 174 aa4.01□□□□□ -1.77
SCN2A-215ENST00000637266 A8MUU9 505 aa4□□□□□ -1.77
SCN2A-215ENST00000637266 C20orf166-AS1Q96NR2 134 aa4□□□□□ -1.77
SCN2A-215ENST00000637266 Q6ZRN7 208 aaPredicted RBP3.99□□□□□ -1.77
SCN2A-215ENST00000637266 KRTAP10-1P60331 282 aa3.98□□□□□ -1.77
SCN2A-215ENST00000637266 CENPEQ02224 2701 aa3.98□□□□□ -1.77
SCN2A-215ENST00000637266 DMBT1Q9UGM3 2413 aaPredicted RBP3.93□□□□□ -1.78
SCN2A-215ENST00000637266 NSD1Q96L73 2696 aaPredicted RBP3.93□□□□□ -1.78
SCN2A-215ENST00000637266 KRTAP11-1Q8IUC1 163 aa3.92□□□□□ -1.78
SCN2A-215ENST00000637266 KRTAP10-2P60368 255 aa3.89□□□□□ -1.79
SCN2A-215ENST00000637266 UNC79Q9P2D8 2635 aa3.89□□□□□ -1.79
SCN2A-215ENST00000637266 GCN1Q92616 2671 aaKnown RBP3.89□□□□□ -1.79
SCN2A-215ENST00000637266 TEP1Q99973 2627 aaKnown RBP3.87□□□□□ -1.79
SCN2A-215ENST00000637266 CFAP46Q8IYW2 2715 aa3.86□□□□□ -1.79
SCN2A-215ENST00000637266 KRTAP13-2Q52LG2 175 aa3.86□□□□□ -1.79
SCN2A-215ENST00000637266 TPRXLQ17RH7 258 aa3.84□□□□□ -1.8
SCN2A-215ENST00000637266 ZNF292O60281 2723 aa3.82□□□□□ -1.8
SCN2A-215ENST00000637266 PRO2289Q9P1D8 64 aa3.82□□□□□ -1.8
SCN2A-215ENST00000637266 NOTCH1P46531 2555 aa3.81□□□□□ -1.8
SCN2A-215ENST00000637266 KRTAP7-1Q8IUC3 87 aa3.81□□□□□ -1.8
SCN2A-215ENST00000637266 COL6A5A8TX70 2615 aa3.81□□□□□ -1.8
SCN2A-215ENST00000637266 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
SCN2A-215ENST00000637266 P0C880 135 aa3.79□□□□□ -1.8
SCN2A-215ENST00000637266 STAB2Q8WWQ8 2551 aa3.79□□□□□ -1.8
SCN2A-215ENST00000637266 H0YAA0 97 aa3.78□□□□□ -1.81
SCN2A-215ENST00000637266 SETXQ7Z333 2677 aaKnown RBP3.78□□□□□ -1.81
SCN2A-215ENST00000637266 MAP1AP78559 2803 aaPredicted RBP3.77□□□□□ -1.81
SCN2A-215ENST00000637266 PRRC2CQ9Y520 2896 aaKnown RBP3.75□□□□□ -1.81
SCN2A-215ENST00000637266 A8MU10 97 aa3.75□□□□□ -1.81
SCN2A-215ENST00000637266 CHD6Q8TD26 2715 aa3.73□□□□□ -1.81
SCN2A-215ENST00000637266 ITPR2Q14571 2701 aa3.73□□□□□ -1.81
SCN2A-215ENST00000637266 XP32Q5T750 250 aa3.72□□□□□ -1.81
SCN2A-215ENST00000637266 TEX15Q9BXT5 2789 aa3.72□□□□□ -1.81
SCN2A-215ENST00000637266 C10orf95Q9H7T3 257 aa3.71□□□□□ -1.81
SCN2A-215ENST00000637266 KRTAP1-4P0C5Y4 121 aa3.71□□□□□ -1.82
SCN2A-215ENST00000637266 IGSF10Q6WRI0 2623 aa3.7□□□□□ -1.82
SCN2A-215ENST00000637266 AKAP13Q12802 2813 aa3.67□□□□□ -1.82
SCN2A-215ENST00000637266 BPTFQ12830 3046 aa3.67□□□□□ -1.82
SCN2A-215ENST00000637266 CENPFP49454 3210 aa3.66□□□□□ -1.82
SCN2A-215ENST00000637266 KRTAP13-3Q3SY46 172 aa3.65□□□□□ -1.83
SCN2A-215ENST00000637266 NIPBLQ6KC79 2804 aaeCLIP3.64□□□□□ -1.83
SCN2A-215ENST00000637266 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
SCN2A-215ENST00000637266 BAHCC1Q9P281 2608 aa3.6□□□□□ -1.83
SCN2A-215ENST00000637266 INE1O15225 51 aa3.58□□□□□ -1.84
SCN2A-215ENST00000637266 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
SCN2A-215ENST00000637266 KRTAP10-8P60410 259 aa3.55□□□□□ -1.84
SCN2A-215ENST00000637266 SRCAPQ6ZRS2 3230 aa3.55□□□□□ -1.84
SCN2A-215ENST00000637266 UBR5O95071 2799 aaPredicted RBP3.54□□□□□ -1.84
SCN2A-215ENST00000637266 ITPR1Q14643 2758 aa3.52□□□□□ -1.85
SCN2A-215ENST00000637266 TRANK1O15050 2925 aa3.5□□□□□ -1.85
SCN2A-215ENST00000637266 NBEAL2Q6ZNJ1 2754 aa3.5□□□□□ -1.85
SCN2A-215ENST00000637266 APCP25054 2843 aa3.48□□□□□ -1.85
SCN2A-215ENST00000637266 HIVEP1P15822 2718 aa3.47□□□□□ -1.85
SCN2A-215ENST00000637266 FLNCQ14315 2725 aa3.45□□□□□ -1.86
SCN2A-215ENST00000637266 A0A1B0GVY2 172 aa3.45□□□□□ -1.86
SCN2A-215ENST00000637266 KRTAP10-10P60014 251 aa3.45□□□□□ -1.86
SCN2A-215ENST00000637266 EP400Q96L91 3159 aa3.45□□□□□ -1.86
SCN2A-215ENST00000637266 UTP20O75691 2785 aaKnown RBP3.44□□□□□ -1.86
SCN2A-215ENST00000637266 KRTAP12-1P59990 96 aa3.41□□□□□ -1.86
SCN2A-215ENST00000637266 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
SCN2A-215ENST00000637266 CHD9Q3L8U1 2897 aa3.38□□□□□ -1.87
SCN2A-215ENST00000637266 TGP01266 2768 aa3.33□□□□□ -1.88
SCN2A-215ENST00000637266 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
SCN2A-215ENST00000637266 TENM3Q9P273 2699 aa3.32□□□□□ -1.88
SCN2A-215ENST00000637266 TENM4Q6N022 2769 aa3.31□□□□□ -1.88
SCN2A-215ENST00000637266 KRTAP15-1Q3LI76 137 aa3.29□□□□□ -1.88
SCN2A-215ENST00000637266 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
SCN2A-215ENST00000637266 DSPP15924 2871 aaKnown RBP3.27□□□□□ -1.89
SCN2A-215ENST00000637266 KRTAP3-1Q9BYR8 98 aa3.26□□□□□ -1.89
SCN2A-215ENST00000637266 TENM1Q9UKZ4 2725 aa3.26□□□□□ -1.89
SCN2A-215ENST00000637266 CEP350Q5VT06 3117 aa3.26□□□□□ -1.89
SCN2A-215ENST00000637266 DNAH12Q6ZR08 3092 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms