RNA–Protein interactions for RNA: ENST00000636822.2

TCF4-281, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-281ENST00000636822 KRTAP29-1A8MX34 341 aaPredicted RBP3.12□□□□□ -1.91
TCF4-281ENST00000636822 JMJD1CQ15652 2540 aa3.11□□□□□ -1.91
TCF4-281ENST00000636822 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.11□□□□□ -1.91
TCF4-281ENST00000636822 H3BNG1 76 aa3.11□□□□□ -1.91
TCF4-281ENST00000636822 C9orf92A6NGG3 77 aa3.11□□□□□ -1.91
TCF4-281ENST00000636822 MYO15AQ9UKN7 3530 aa3.11□□□□□ -1.91
TCF4-281ENST00000636822 KRTAP24-1Q3LI83 254 aa3.1□□□□□ -1.91
TCF4-281ENST00000636822 COX6B2Q6YFQ2 88 aa3.1□□□□□ -1.91
TCF4-281ENST00000636822 ZFHX3Q15911 3703 aa3.1□□□□□ -1.91
TCF4-281ENST00000636822 EPG5Q9HCE0 2579 aa3.09□□□□□ -1.91
TCF4-281ENST00000636822 BDP1A6H8Y1 2624 aa3.09□□□□□ -1.91
TCF4-281ENST00000636822 DMDP11532 3685 aa3.09□□□□□ -1.91
TCF4-281ENST00000636822 ASPMQ8IZT6 3477 aa3.08□□□□□ -1.92
TCF4-281ENST00000636822 NBDYA0A0U1RRE5 68 aa3.08□□□□□ -1.92
TCF4-281ENST00000636822 KRTAP26-1Q6PEX3 210 aa3.08□□□□□ -1.92
TCF4-281ENST00000636822 ANAPC11Q9NYG5 84 aa3.08□□□□□ -1.92
TCF4-281ENST00000636822 PIEZO2Q9H5I5 2752 aa3.08□□□□□ -1.92
TCF4-281ENST00000636822 GIG44P09565 113 aaPredicted RBP3.08□□□□□ -1.92
TCF4-281ENST00000636822 K7EIL1 84 aa3.08□□□□□ -1.92
TCF4-281ENST00000636822 CHD8Q9HCK8 2581 aa3.08□□□□□ -1.92
TCF4-281ENST00000636822 PRRC2CQ9Y520 2896 aaKnown RBP3.08□□□□□ -1.92
TCF4-281ENST00000636822 SMR3BP02814 79 aaPredicted RBP3.07□□□□□ -1.92
TCF4-281ENST00000636822 UNC80Q8N2C7 3258 aa3.06□□□□□ -1.92
TCF4-281ENST00000636822 LAMA3Q16787 3333 aa3.05□□□□□ -1.92
TCF4-281ENST00000636822 S4R3F8 94 aa3.04□□□□□ -1.92
TCF4-281ENST00000636822 C10orf95Q9H7T3 257 aa3.04□□□□□ -1.92
TCF4-281ENST00000636822 SPENQ96T58 3664 aaKnown RBP3.03□□□□□ -1.92
TCF4-281ENST00000636822 P0C880 135 aa3.03□□□□□ -1.92
TCF4-281ENST00000636822 PLAC8Q9NZF1 115 aa3.03□□□□□ -1.92
TCF4-281ENST00000636822 R4GN34 69 aa3.03□□□□□ -1.92
TCF4-281ENST00000636822 SPRR1AP35321 89 aa3.02□□□□□ -1.93
TCF4-281ENST00000636822 PP632Q6XCG6 107 aa3.02□□□□□ -1.93
TCF4-281ENST00000636822 WWC2-AS2Q96NR7 200 aa3.02□□□□□ -1.93
TCF4-281ENST00000636822 KRTAP10-11P60412 298 aa3.01□□□□□ -1.93
TCF4-281ENST00000636822 A0A087WTM6 91 aa3.01□□□□□ -1.93
TCF4-281ENST00000636822 CENPEQ02224 2701 aa3.01□□□□□ -1.93
TCF4-281ENST00000636822 FASNP49327 2511 aaKnown RBP3.01□□□□□ -1.93
TCF4-281ENST00000636822 MGAQ8IWI9 3026 aa3□□□□□ -1.93
TCF4-281ENST00000636822 BSNQ9UPA5 3926 aa3□□□□□ -1.93
TCF4-281ENST00000636822 RANBP2P49792 3224 aaKnown RBP2.99□□□□□ -1.93
TCF4-281ENST00000636822 HECTD1Q9ULT8 2610 aa2.99□□□□□ -1.93
TCF4-281ENST00000636822 AKAP9Q99996 3911 aa2.99□□□□□ -1.93
TCF4-281ENST00000636822 EYSQ5T1H1 3165 aa2.99□□□□□ -1.93
TCF4-281ENST00000636822 VPS13CQ709C8 3753 aa2.98□□□□□ -1.93
TCF4-281ENST00000636822 KRTAP10-3P60369 221 aa2.98□□□□□ -1.93
TCF4-281ENST00000636822 FREM2Q5SZK8 3169 aa2.98□□□□□ -1.93
TCF4-281ENST00000636822 SPRR1BP22528 89 aa2.97□□□□□ -1.93
TCF4-281ENST00000636822 AKAP13Q12802 2813 aa2.97□□□□□ -1.93
TCF4-281ENST00000636822 USP9YO00507 2555 aaPredicted RBP2.97□□□□□ -1.93
TCF4-281ENST00000636822 DSPP15924 2871 aaKnown RBP2.96□□□□□ -1.93
TCF4-281ENST00000636822 H0YAA0 97 aa2.96□□□□□ -1.94
TCF4-281ENST00000636822 M0QZ58 72 aa2.96□□□□□ -1.94
TCF4-281ENST00000636822 TNRC18O15417 2968 aaPredicted RBP2.96□□□□□ -1.94
TCF4-281ENST00000636822 Q6ZSA8 131 aa2.96□□□□□ -1.94
TCF4-281ENST00000636822 CFAP54Q96N23 3096 aa2.95□□□□□ -1.94
TCF4-281ENST00000636822 CEP350Q5VT06 3117 aa2.95□□□□□ -1.94
TCF4-281ENST00000636822 CHD6Q8TD26 2715 aa2.95□□□□□ -1.94
TCF4-281ENST00000636822 REV3LO60673 3130 aa2.94□□□□□ -1.94
TCF4-281ENST00000636822 CELSR3Q9NYQ7 3312 aa2.94□□□□□ -1.94
TCF4-281ENST00000636822 LAMA5O15230 3695 aa2.94□□□□□ -1.94
TCF4-281ENST00000636822 COL6A3P12111 3177 aa2.93□□□□□ -1.94
TCF4-281ENST00000636822 USP24Q9UPU5 2620 aa2.93□□□□□ -1.94
TCF4-281ENST00000636822 SMG1Q96Q15 3661 aaKnown RBP2.92□□□□□ -1.94
TCF4-281ENST00000636822 DCHS1Q96JQ0 3298 aa2.92□□□□□ -1.94
TCF4-281ENST00000636822 M0R2T5 61 aa2.92□□□□□ -1.94
TCF4-281ENST00000636822 LAMA2P24043 3122 aaKnown RBP2.91□□□□□ -1.94
TCF4-281ENST00000636822 ITPR1Q14643 2758 aa2.91□□□□□ -1.94
TCF4-281ENST00000636822 BAHCC1Q9P281 2608 aa2.91□□□□□ -1.94
TCF4-281ENST00000636822 HTTP42858 3142 aa2.9□□□□□ -1.94
TCF4-281ENST00000636822 HELZ2Q9BYK8 2649 aaKnown RBP2.89□□□□□ -1.95
TCF4-281ENST00000636822 NBEAL1Q6ZS30 2694 aa2.89□□□□□ -1.95
TCF4-281ENST00000636822 ZFHX4Q86UP3 3567 aa2.89□□□□□ -1.95
TCF4-281ENST00000636822 CFAP46Q8IYW2 2715 aa2.89□□□□□ -1.95
TCF4-281ENST00000636822 KRTAP10-8P60410 259 aa2.87□□□□□ -1.95
TCF4-281ENST00000636822 NBPF19A0A087WUL8 3843 aa2.87□□□□□ -1.95
TCF4-281ENST00000636822 VCANP13611 3396 aa2.87□□□□□ -1.95
TCF4-281ENST00000636822 LRBAP50851 2863 aa2.87□□□□□ -1.95
TCF4-281ENST00000636822 LAMA1P25391 3075 aa2.87□□□□□ -1.95
TCF4-281ENST00000636822 KRTAP23-1A1A580 65 aa2.86□□□□□ -1.95
TCF4-281ENST00000636822 NSD1Q96L73 2696 aaPredicted RBP2.86□□□□□ -1.95
TCF4-281ENST00000636822 KRTAP1-3Q8IUG1 177 aa2.86□□□□□ -1.95
TCF4-281ENST00000636822 KRTAP1-1Q07627 177 aa2.85□□□□□ -1.95
TCF4-281ENST00000636822 KRTAP15-1Q3LI76 137 aa2.85□□□□□ -1.95
TCF4-281ENST00000636822 NOTCH1P46531 2555 aa2.85□□□□□ -1.95
TCF4-281ENST00000636822 CHD9Q3L8U1 2897 aa2.85□□□□□ -1.95
TCF4-281ENST00000636822 VPS13AQ96RL7 3174 aa2.85□□□□□ -1.95
TCF4-281ENST00000636822 PRUNE2Q8WUY3 3088 aa2.84□□□□□ -1.96
TCF4-281ENST00000636822 SPEGQ15772 3267 aa2.83□□□□□ -1.96
TCF4-281ENST00000636822 INE1O15225 51 aa2.83□□□□□ -1.96
TCF4-281ENST00000636822 TNP1P09430 55 aa2.83□□□□□ -1.96
TCF4-281ENST00000636822 COL6A5A8TX70 2615 aa2.83□□□□□ -1.96
TCF4-281ENST00000636822 STAB2Q8WWQ8 2551 aa2.83□□□□□ -1.96
TCF4-281ENST00000636822 PRO2289Q9P1D8 64 aa2.83□□□□□ -1.96
TCF4-281ENST00000636822 CEP295Q9C0D2 2601 aa2.83□□□□□ -1.96
TCF4-281ENST00000636822 WDFY4Q6ZS81 3184 aa2.83□□□□□ -1.96
TCF4-281ENST00000636822 CHD7Q9P2D1 2997 aa2.82□□□□□ -1.96
TCF4-281ENST00000636822 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
TCF4-281ENST00000636822 UNC79Q9P2D8 2635 aa2.82□□□□□ -1.96
TCF4-281ENST00000636822 SRRM2Q9UQ35 2752 aaKnown RBP2.81□□□□□ -1.96
TCF4-281ENST00000636822 GCN1Q92616 2671 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms