RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 Q8N9P0 234 aaPredicted RBP10.89□□□□□ -0.67
CACNA1A-225ENST00000636389 DMBT1Q9UGM3 2413 aaPredicted RBP10.88□□□□□ -0.67
CACNA1A-225ENST00000636389 PCNTO95613 3336 aa10.87□□□□□ -0.67
CACNA1A-225ENST00000636389 ROMO1P60602 79 aa10.84□□□□□ -0.67
CACNA1A-225ENST00000636389 FAM229BQ4G0N7 80 aa10.84□□□□□ -0.67
CACNA1A-225ENST00000636389 HELZ2Q9BYK8 2649 aaKnown RBP10.83□□□□□ -0.68
CACNA1A-225ENST00000636389 KRTAP16-1A8MUX0 517 aa10.81□□□□□ -0.68
CACNA1A-225ENST00000636389 LINC01558Q9Y6Z2 57 aa10.79□□□□□ -0.68
CACNA1A-225ENST00000636389 ADM2Q7Z4H4 148 aa10.78□□□□□ -0.68
CACNA1A-225ENST00000636389 Q5W150 140 aa10.78□□□□□ -0.68
CACNA1A-225ENST00000636389 RPL37P61927 97 aaKnown RBP10.77□□□□□ -0.69
CACNA1A-225ENST00000636389 Q5XG85 94 aa10.76□□□□□ -0.69
CACNA1A-225ENST00000636389 CHD6Q8TD26 2715 aa10.76□□□□□ -0.69
CACNA1A-225ENST00000636389 TEX15Q9BXT5 2789 aa10.71□□□□□ -0.7
CACNA1A-225ENST00000636389 CFAP54Q96N23 3096 aa10.69□□□□□ -0.7
CACNA1A-225ENST00000636389 C20orf166-AS1Q96NR2 134 aa10.69□□□□□ -0.7
CACNA1A-225ENST00000636389 MMP24-AS1A0A0U1RRL7 71 aa10.68□□□□□ -0.7
CACNA1A-225ENST00000636389 PLAC8Q9NZF1 115 aa10.67□□□□□ -0.7
CACNA1A-225ENST00000636389 FP248Q71RG6 208 aaPredicted RBP10.64□□□□□ -0.71
CACNA1A-225ENST00000636389 UNC79Q9P2D8 2635 aa10.64□□□□□ -0.71
CACNA1A-225ENST00000636389 SPATA8Q6RVD6 105 aa10.63□□□□□ -0.71
CACNA1A-225ENST00000636389 A0A096LNT2 108 aa10.63□□□□□ -0.71
CACNA1A-225ENST00000636389 Q5VV11 94 aa10.62□□□□□ -0.71
CACNA1A-225ENST00000636389 XIRP2A4UGR9 3374 aa10.6□□□□□ -0.71
CACNA1A-225ENST00000636389 KMT2BQ9UMN6 2715 aaPredicted RBP10.59□□□□□ -0.71
CACNA1A-225ENST00000636389 COL6A5A8TX70 2615 aa10.56□□□□□ -0.72
CACNA1A-225ENST00000636389 NOTCH1P46531 2555 aa10.56□□□□□ -0.72
CACNA1A-225ENST00000636389 Q8NDZ9 215 aa10.55□□□□□ -0.72
CACNA1A-225ENST00000636389 STAB2Q8WWQ8 2551 aa10.53□□□□□ -0.72
CACNA1A-225ENST00000636389 A0A0C4DFX4 3053 aa10.53□□□□□ -0.72
CACNA1A-225ENST00000636389 OXTP01178 125 aa10.52□□□□□ -0.73
CACNA1A-225ENST00000636389 KRTAP1-3Q8IUG1 177 aa10.51□□□□□ -0.73
CACNA1A-225ENST00000636389 LAMA2P24043 3122 aaKnown RBP10.47□□□□□ -0.73
CACNA1A-225ENST00000636389 BAHCC1Q9P281 2608 aa10.47□□□□□ -0.73
CACNA1A-225ENST00000636389 CYSTM1Q9H1C7 97 aa10.47□□□□□ -0.73
CACNA1A-225ENST00000636389 GCN1Q92616 2671 aaKnown RBP10.46□□□□□ -0.73
CACNA1A-225ENST00000636389 REV3LO60673 3130 aa10.46□□□□□ -0.74
CACNA1A-225ENST00000636389 LINC00472Q9H8W2 130 aa10.45□□□□□ -0.74
CACNA1A-225ENST00000636389 KRTAP10-1P60331 282 aa10.42□□□□□ -0.74
CACNA1A-225ENST00000636389 KRTAP1-1Q07627 177 aa10.41□□□□□ -0.74
CACNA1A-225ENST00000636389 TEP1Q99973 2627 aaKnown RBP10.4□□□□□ -0.74
CACNA1A-225ENST00000636389 KRTAP10-2P60368 255 aa10.39□□□□□ -0.75
CACNA1A-225ENST00000636389 Q6ZR54 194 aa10.37□□□□□ -0.75
CACNA1A-225ENST00000636389 PANO1I0J062 215 aa10.36□□□□□ -0.75
CACNA1A-225ENST00000636389 A8MUU9 505 aa10.36□□□□□ -0.75
CACNA1A-225ENST00000636389 KRTAP26-1Q6PEX3 210 aa10.36□□□□□ -0.75
CACNA1A-225ENST00000636389 ASB16-AS1Q495Z4 193 aa10.34□□□□□ -0.75
CACNA1A-225ENST00000636389 FREM2Q5SZK8 3169 aa10.33□□□□□ -0.76
CACNA1A-225ENST00000636389 LCE6AA0A183 80 aa10.33□□□□□ -0.76
CACNA1A-225ENST00000636389 ITPR2Q14571 2701 aa10.32□□□□□ -0.76
CACNA1A-225ENST00000636389 CELSR3Q9NYQ7 3312 aa10.32□□□□□ -0.76
CACNA1A-225ENST00000636389 SPRR1AP35321 89 aa10.31□□□□□ -0.76
CACNA1A-225ENST00000636389 SETXQ7Z333 2677 aaKnown RBP10.3□□□□□ -0.76
CACNA1A-225ENST00000636389 SPRR1BP22528 89 aa10.28□□□□□ -0.76
CACNA1A-225ENST00000636389 C10orf95Q9H7T3 257 aa10.27□□□□□ -0.77
CACNA1A-225ENST00000636389 NDUFAF8A1L188 74 aa10.23□□□□□ -0.77
CACNA1A-225ENST00000636389 KRTAP1-5Q9BYS1 174 aa10.23□□□□□ -0.77
CACNA1A-225ENST00000636389 MKI67P46013 3256 aaKnown RBP10.22□□□□□ -0.77
CACNA1A-225ENST00000636389 MAP1AP78559 2803 aaPredicted RBP10.19□□□□□ -0.78
CACNA1A-225ENST00000636389 ZNF292O60281 2723 aa10.19□□□□□ -0.78
CACNA1A-225ENST00000636389 A8MU10 97 aa10.18□□□□□ -0.78
CACNA1A-225ENST00000636389 A0A087X002 238 aa10.17□□□□□ -0.78
CACNA1A-225ENST00000636389 APCP25054 2843 aa10.16□□□□□ -0.78
CACNA1A-225ENST00000636389 TRIOO75962 3097 aa10.15□□□□□ -0.78
CACNA1A-225ENST00000636389 TNP1P09430 55 aa10.14□□□□□ -0.79
CACNA1A-225ENST00000636389 KRTAP25-1Q3LHN0 102 aa10.14□□□□□ -0.79
CACNA1A-225ENST00000636389 RANBP2P49792 3224 aaKnown RBP10.13□□□□□ -0.79
CACNA1A-225ENST00000636389 NSD1Q96L73 2696 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-225ENST00000636389 CRYBG3Q68DQ2 2970 aa10.06□□□□□ -0.8
CACNA1A-225ENST00000636389 MGAQ8IWI9 3026 aa10.04□□□□□ -0.8
CACNA1A-225ENST00000636389 WDFY4Q6ZS81 3184 aa10.04□□□□□ -0.8
CACNA1A-225ENST00000636389 FRYQ5TBA9 3013 aa10.02□□□□□ -0.81
CACNA1A-225ENST00000636389 VPS13AQ96RL7 3174 aa10.02□□□□□ -0.81
CACNA1A-225ENST00000636389 NBEAL2Q6ZNJ1 2754 aa10.01□□□□□ -0.81
CACNA1A-225ENST00000636389 DNAH14Q0VDD8 3507 aa9.98□□□□□ -0.81
CACNA1A-225ENST00000636389 A6NN06 94 aa9.98□□□□□ -0.81
CACNA1A-225ENST00000636389 NOTCH2NLQ7Z3S9 236 aa9.98□□□□□ -0.81
CACNA1A-225ENST00000636389 KRTAP10-8P60410 259 aa9.97□□□□□ -0.81
CACNA1A-225ENST00000636389 UNC80Q8N2C7 3258 aa9.96□□□□□ -0.82
CACNA1A-225ENST00000636389 BRCA2P51587 3418 aa9.94□□□□□ -0.82
CACNA1A-225ENST00000636389 IGSF10Q6WRI0 2623 aa9.94□□□□□ -0.82
CACNA1A-225ENST00000636389 LAMA3Q16787 3333 aa9.89□□□□□ -0.83
CACNA1A-225ENST00000636389 P0C880 135 aa9.88□□□□□ -0.83
CACNA1A-225ENST00000636389 UTP20O75691 2785 aaKnown RBP9.87□□□□□ -0.83
CACNA1A-225ENST00000636389 CHD7Q9P2D1 2997 aa9.86□□□□□ -0.83
CACNA1A-225ENST00000636389 PRUNE2Q8WUY3 3088 aa9.86□□□□□ -0.83
CACNA1A-225ENST00000636389 TRANK1O15050 2925 aa9.84□□□□□ -0.83
CACNA1A-225ENST00000636389 DSPP15924 2871 aaKnown RBP9.83□□□□□ -0.84
CACNA1A-225ENST00000636389 A0A1B0GVY2 172 aa9.83□□□□□ -0.84
CACNA1A-225ENST00000636389 KRTAP29-1A8MX34 341 aaPredicted RBP9.81□□□□□ -0.84
CACNA1A-225ENST00000636389 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
CACNA1A-225ENST00000636389 KRTAP4-16G5E9R7 235 aaPredicted RBP9.77□□□□□ -0.84
CACNA1A-225ENST00000636389 KALRNO60229 2985 aa9.77□□□□□ -0.85
CACNA1A-225ENST00000636389 ITPR1Q14643 2758 aa9.77□□□□□ -0.85
CACNA1A-225ENST00000636389 UBR5O95071 2799 aaPredicted RBP9.76□□□□□ -0.85
CACNA1A-225ENST00000636389 ASH1LQ9NR48 2969 aaKnown RBP9.75□□□□□ -0.85
CACNA1A-225ENST00000636389 SPEGQ15772 3267 aa9.72□□□□□ -0.85
CACNA1A-225ENST00000636389 HTTP42858 3142 aa9.72□□□□□ -0.85
CACNA1A-225ENST00000636389 FRYLO94915 3013 aa9.72□□□□□ -0.85
CACNA1A-225ENST00000636389 KRTAP11-1Q8IUC1 163 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 180.8 ms