RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 PKDREJQ9NTG1 2253 aa1.15□□□□□ -2.23
PSPC1-208ENST00000635562 C2CD3Q4AC94 2353 aa1.15□□□□□ -2.23
PSPC1-208ENST00000635562 WNK2Q9Y3S1 2297 aa1.14□□□□□ -2.23
PSPC1-208ENST00000635562 ROS1P08922 2347 aa1.14□□□□□ -2.23
PSPC1-208ENST00000635562 KAAG1Q9UBP8 84 aa1.14□□□□□ -2.23
PSPC1-208ENST00000635562 APLNQ9ULZ1 77 aa1.14□□□□□ -2.23
PSPC1-208ENST00000635562 H3BSH0 61 aa1.13□□□□□ -2.23
PSPC1-208ENST00000635562 KRTAP12-4P60329 112 aa1.13□□□□□ -2.23
PSPC1-208ENST00000635562 SPINK9Q5DT21 86 aa1.13□□□□□ -2.23
PSPC1-208ENST00000635562 TRANK1O15050 2925 aa1.12□□□□□ -2.23
PSPC1-208ENST00000635562 H3BUA1 57 aa1.12□□□□□ -2.23
PSPC1-208ENST00000635562 SPRR1BP22528 89 aa1.12□□□□□ -2.23
PSPC1-208ENST00000635562 PRCDQ00LT1 54 aa1.12□□□□□ -2.23
PSPC1-208ENST00000635562 ZNF292O60281 2723 aa1.12□□□□□ -2.23
PSPC1-208ENST00000635562 MEGF8Q7Z7M0 2845 aa1.11□□□□□ -2.23
PSPC1-208ENST00000635562 LEAP2Q969E1 77 aa1.11□□□□□ -2.23
PSPC1-208ENST00000635562 CSPG4Q6UVK1 2322 aa1.11□□□□□ -2.23
PSPC1-208ENST00000635562 M0QY20 66 aa1.1□□□□□ -2.23
PSPC1-208ENST00000635562 KRTAP12-3P60328 96 aa1.1□□□□□ -2.23
PSPC1-208ENST00000635562 MUC6Q6W4X9 2439 aa1.09□□□□□ -2.23
PSPC1-208ENST00000635562 DEFB109BQ30KR1 87 aa1.09□□□□□ -2.23
PSPC1-208ENST00000635562 CRCT1Q9UGL9 99 aa1.09□□□□□ -2.23
PSPC1-208ENST00000635562 GVINP1Q7Z2Y8 2422 aa1.09□□□□□ -2.24
PSPC1-208ENST00000635562 A0A0D9SG42 100 aa1.08□□□□□ -2.24
PSPC1-208ENST00000635562 S4R3F8 94 aa1.08□□□□□ -2.24
PSPC1-208ENST00000635562 F8P00451 2351 aa1.08□□□□□ -2.24
PSPC1-208ENST00000635562 CELSR2Q9HCU4 2923 aa1.08□□□□□ -2.24
PSPC1-208ENST00000635562 POLQO75417 2590 aa1.07□□□□□ -2.24
PSPC1-208ENST00000635562 CHD7Q9P2D1 2997 aa1.07□□□□□ -2.24
PSPC1-208ENST00000635562 KLK9Q2XQG4 91 aa1.07□□□□□ -2.24
PSPC1-208ENST00000635562 CLPSL2Q6UWE3 100 aa1.07□□□□□ -2.24
PSPC1-208ENST00000635562 ABCA12Q86UK0 2595 aa1.07□□□□□ -2.24
PSPC1-208ENST00000635562 SPTBN2O15020 2390 aa1.07□□□□□ -2.24
PSPC1-208ENST00000635562 SPTBN1Q01082 2364 aaKnown RBP1.07□□□□□ -2.24
PSPC1-208ENST00000635562 ABCA2Q9BZC7 2435 aa1.06□□□□□ -2.24
PSPC1-208ENST00000635562 PRLHP81277 87 aa1.06□□□□□ -2.24
PSPC1-208ENST00000635562 PRRC2CQ9Y520 2896 aaKnown RBP1.06□□□□□ -2.24
PSPC1-208ENST00000635562 CACNA1HO95180 2353 aa1.06□□□□□ -2.24
PSPC1-208ENST00000635562 VWFP04275 2813 aa1.06□□□□□ -2.24
PSPC1-208ENST00000635562 OTOGQ6ZRI0 2925 aa1.05□□□□□ -2.24
PSPC1-208ENST00000635562 CEP290O15078 2479 aa1.05□□□□□ -2.24
PSPC1-208ENST00000635562 RP1L1Q8IWN7 2480 aaPredicted RBP1.05□□□□□ -2.24
PSPC1-208ENST00000635562 A8MTW9 85 aa1.05□□□□□ -2.24
PSPC1-208ENST00000635562 J3QKU1 62 aa1.05□□□□□ -2.24
PSPC1-208ENST00000635562 CHD9Q3L8U1 2897 aa1.05□□□□□ -2.24
PSPC1-208ENST00000635562 SRRM2Q9UQ35 2752 aaKnown RBP1.04□□□□□ -2.24
PSPC1-208ENST00000635562 DEFB106AQ8N104 65 aa1.03□□□□□ -2.24
PSPC1-208ENST00000635562 UBR5O95071 2799 aaPredicted RBP1.03□□□□□ -2.24
PSPC1-208ENST00000635562 TENM2Q9NT68 2774 aa1.02□□□□□ -2.25
PSPC1-208ENST00000635562 TOMM7Q9P0U1 55 aa1.02□□□□□ -2.25
PSPC1-208ENST00000635562 AKAP13Q12802 2813 aa1.01□□□□□ -2.25
PSPC1-208ENST00000635562 K7EIM0 57 aa1.01□□□□□ -2.25
PSPC1-208ENST00000635562 TMEM167AQ8TBQ9 72 aa1.01□□□□□ -2.25
PSPC1-208ENST00000635562 TTC28Q96AY4 2481 aa1□□□□□ -2.25
PSPC1-208ENST00000635562 AKAP6Q13023 2319 aa1□□□□□ -2.25
PSPC1-208ENST00000635562 ATRQ13535 2644 aa1□□□□□ -2.25
PSPC1-208ENST00000635562 KRTAP10-4P60372 401 aaPredicted RBP1□□□□□ -2.25
PSPC1-208ENST00000635562 KRTAP4-1Q9BYQ7 146 aa1□□□□□ -2.25
PSPC1-208ENST00000635562 NOP10Q9NPE3 64 aaKnown RBP1□□□□□ -2.25
PSPC1-208ENST00000635562 DEFB104AQ8WTQ1 72 aa0.98□□□□□ -2.25
PSPC1-208ENST00000635562 MGAQ8IWI9 3026 aa0.97□□□□□ -2.25
PSPC1-208ENST00000635562 HECTD1Q9ULT8 2610 aa0.97□□□□□ -2.25
PSPC1-208ENST00000635562 SPTBN4Q9H254 2564 aa0.97□□□□□ -2.25
PSPC1-208ENST00000635562 SPINK1P00995 79 aa0.97□□□□□ -2.25
PSPC1-208ENST00000635562 KRTAP21-3Q3LHN1 58 aa0.97□□□□□ -2.25
PSPC1-208ENST00000635562 SPTA1P02549 2419 aa0.97□□□□□ -2.25
PSPC1-208ENST00000635562 WNK1Q9H4A3 2382 aa0.97□□□□□ -2.25
PSPC1-208ENST00000635562 FCGBPQ9Y6R7 5405 aaPredicted RBP0.96□□□□□ -2.26
PSPC1-208ENST00000635562 PKD1L2Q7Z442 2459 aa0.96□□□□□ -2.26
PSPC1-208ENST00000635562 PDZD2O15018 2839 aa0.96□□□□□ -2.26
PSPC1-208ENST00000635562 CHD6Q8TD26 2715 aa0.95□□□□□ -2.26
PSPC1-208ENST00000635562 ACACAQ13085 2346 aa0.95□□□□□ -2.26
PSPC1-208ENST00000635562 COL6A5A8TX70 2615 aa0.95□□□□□ -2.26
PSPC1-208ENST00000635562 EP300Q09472 2414 aaPredicted RBP0.95□□□□□ -2.26
PSPC1-208ENST00000635562 RPL39P5Q59GN2 51 aa0.95□□□□□ -2.26
PSPC1-208ENST00000635562 CELSR1Q9NYQ6 3014 aa0.95□□□□□ -2.26
PSPC1-208ENST00000635562 TENM4Q6N022 2769 aa0.94□□□□□ -2.26
PSPC1-208ENST00000635562 NAV2Q8IVL1 2488 aa0.94□□□□□ -2.26
PSPC1-208ENST00000635562 HELZ2Q9BYK8 2649 aaKnown RBP0.94□□□□□ -2.26
PSPC1-208ENST00000635562 SETD2Q9BYW2 2564 aaPredicted RBP0.94□□□□□ -2.26
PSPC1-208ENST00000635562 CRYBG3Q68DQ2 2970 aa0.93□□□□□ -2.26
PSPC1-208ENST00000635562 CCDC168Q8NDH2 2452 aa0.93□□□□□ -2.26
PSPC1-208ENST00000635562 TNRC18O15417 2968 aaPredicted RBP0.92□□□□□ -2.26
PSPC1-208ENST00000635562 PIEZO1Q92508 2521 aa0.91□□□□□ -2.26
PSPC1-208ENST00000635562 BDP1A6H8Y1 2624 aa0.91□□□□□ -2.26
PSPC1-208ENST00000635562 CSMD3Q7Z407 3707 aa0.91□□□□□ -2.26
PSPC1-208ENST00000635562 M0QZ58 72 aa0.91□□□□□ -2.26
PSPC1-208ENST00000635562 USP9YO00507 2555 aaPredicted RBP0.91□□□□□ -2.26
PSPC1-208ENST00000635562 ITPR3Q14573 2671 aa0.91□□□□□ -2.26
PSPC1-208ENST00000635562 CREBBPQ92793 2442 aa0.9□□□□□ -2.26
PSPC1-208ENST00000635562 USP24Q9UPU5 2620 aa0.9□□□□□ -2.26
PSPC1-208ENST00000635562 DEFB108AA8MXU0 73 aa0.9□□□□□ -2.27
PSPC1-208ENST00000635562 NCOR1O75376 2440 aa0.89□□□□□ -2.27
PSPC1-208ENST00000635562 APCP25054 2843 aa0.89□□□□□ -2.27
PSPC1-208ENST00000635562 DNAH11Q96DT5 4516 aa0.89□□□□□ -2.27
PSPC1-208ENST00000635562 VPS13DQ5THJ4 4388 aa0.89□□□□□ -2.27
PSPC1-208ENST00000635562 FBN2P35556 2912 aa0.88□□□□□ -2.27
PSPC1-208ENST00000635562 FLNCQ14315 2725 aa0.87□□□□□ -2.27
PSPC1-208ENST00000635562 FBN3Q75N90 2809 aa0.87□□□□□ -2.27
PSPC1-208ENST00000635562 NBASA2RRP1 2371 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms