RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 C2orf91Q6ZV80 131 aa7.93□□□□□ -1.14
PNKP-223ENST00000629179 hADV29S1A0JD25 119 aa7.92□□□□□ -1.14
PNKP-223ENST00000629179 CFC1BP0CG36 223 aa7.92□□□□□ -1.14
PNKP-223ENST00000629179 CFC1P0CG37 223 aa7.92□□□□□ -1.14
PNKP-223ENST00000629179 H7C2G1 150 aa7.91□□□□□ -1.14
PNKP-223ENST00000629179 LIMD2Q9BT23 127 aa7.91□□□□□ -1.14
PNKP-223ENST00000629179 CD164Q04900 197 aa7.9□□□□□ -1.14
PNKP-223ENST00000629179 Q6ZQY7 126 aa7.9□□□□□ -1.14
PNKP-223ENST00000629179 RAB37Q96AX2 223 aa7.89□□□□□ -1.15
PNKP-223ENST00000629179 CEND1Q8N111 149 aa7.87□□□□□ -1.15
PNKP-223ENST00000629179 A0A0B4J2C4 111 aa7.86□□□□□ -1.15
PNKP-223ENST00000629179 F8WEM9 126 aa7.86□□□□□ -1.15
PNKP-223ENST00000629179 MUC2Q02817 5179 aa7.86□□□□□ -1.15
PNKP-223ENST00000629179 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.85□□□□□ -1.15
PNKP-223ENST00000629179 TMEM238LA0A1B0GVL6 79 aa7.84□□□□□ -1.15
PNKP-223ENST00000629179 A6NJY4 79 aa7.84□□□□□ -1.15
PNKP-223ENST00000629179 UBE2V1Q13404 147 aa7.84□□□□□ -1.15
PNKP-223ENST00000629179 MUC17Q685J3 4493 aa7.84□□□□□ -1.15
PNKP-223ENST00000629179 A0A0U1RQV1 116 aa7.83□□□□□ -1.16
PNKP-223ENST00000629179 TAX1BP3O14907 124 aa7.83□□□□□ -1.16
PNKP-223ENST00000629179 FXYD2P54710 66 aa7.83□□□□□ -1.16
PNKP-223ENST00000629179 ASB16-AS1Q495Z4 193 aa7.83□□□□□ -1.16
PNKP-223ENST00000629179 Q5XG85 94 aa7.83□□□□□ -1.16
PNKP-223ENST00000629179 C9orf118A6NHY6 69 aa7.82□□□□□ -1.16
PNKP-223ENST00000629179 XP32Q5T750 250 aa7.82□□□□□ -1.16
PNKP-223ENST00000629179 GTF2H5Q6ZYL4 71 aa7.82□□□□□ -1.16
PNKP-223ENST00000629179 IGLV8-61A0A075B6I0 122 aa7.81□□□□□ -1.16
PNKP-223ENST00000629179 H0YGX0 51 aa7.81□□□□□ -1.16
PNKP-223ENST00000629179 OCIAD2Q56VL3 154 aa7.81□□□□□ -1.16
PNKP-223ENST00000629179 C1orf195Q5TG92 126 aa7.81□□□□□ -1.16
PNKP-223ENST00000629179 FAM218AQ96MZ4 157 aa7.81□□□□□ -1.16
PNKP-223ENST00000629179 PRO1854Q9UHT4 67 aa7.81□□□□□ -1.16
PNKP-223ENST00000629179 C9orf92A6NGG3 77 aa7.8□□□□□ -1.16
PNKP-223ENST00000629179 SEC61BP60468 96 aaKnown RBP7.8□□□□□ -1.16
PNKP-223ENST00000629179 Q6JHZ5 121 aa7.8□□□□□ -1.16
PNKP-223ENST00000629179 IGFL1Q6UW32 110 aa7.8□□□□□ -1.16
PNKP-223ENST00000629179 PPDPFLQ8WWR9 84 aa7.79□□□□□ -1.16
PNKP-223ENST00000629179 KRTAP4-1Q9BYQ7 146 aa7.78□□□□□ -1.16
PNKP-223ENST00000629179 SNCGO76070 127 aa7.77□□□□□ -1.17
PNKP-223ENST00000629179 TCL1BO95988 128 aa7.77□□□□□ -1.17
PNKP-223ENST00000629179 CLEC2BQ92478 149 aa7.77□□□□□ -1.17
PNKP-223ENST00000629179 H3BUT2 72 aa7.76□□□□□ -1.17
PNKP-223ENST00000629179 FABP2P12104 132 aa7.76□□□□□ -1.17
PNKP-223ENST00000629179 TRBV7-7A0A0K0K1E9 115 aa7.75□□□□□ -1.17
PNKP-223ENST00000629179 TRIAP1O43715 76 aa7.75□□□□□ -1.17
PNKP-223ENST00000629179 LYRM7Q5U5X0 104 aa7.75□□□□□ -1.17
PNKP-223ENST00000629179 K7ERJ3 54 aa7.74□□□□□ -1.17
PNKP-223ENST00000629179 A0A1W2PPM0 123 aa7.73□□□□□ -1.17
PNKP-223ENST00000629179 A0A1B0GX51 115 aa7.72□□□□□ -1.17
PNKP-223ENST00000629179 K7EP34 96 aa7.72□□□□□ -1.17
PNKP-223ENST00000629179 NDUFV3P56181 108 aaKnown RBP7.72□□□□□ -1.17
PNKP-223ENST00000629179 PSMB2P49721 201 aa7.7□□□□□ -1.18
PNKP-223ENST00000629179 LCE2AQ5TA79 106 aaPredicted RBP7.7□□□□□ -1.18
PNKP-223ENST00000629179 SPCS1Q9Y6A9 102 aa7.7□□□□□ -1.18
PNKP-223ENST00000629179 PCOTHQ58A44 107 aa7.69□□□□□ -1.18
PNKP-223ENST00000629179 FAT4Q6V0I7 4981 aa7.69□□□□□ -1.18
PNKP-223ENST00000629179 H3BMG7 143 aa7.67□□□□□ -1.18
PNKP-223ENST00000629179 TRBV20-1A0A075B6N2 111 aa7.66□□□□□ -1.18
PNKP-223ENST00000629179 F8W1H4 67 aa7.66□□□□□ -1.18
PNKP-223ENST00000629179 GHRHP01286 108 aa7.66□□□□□ -1.18
PNKP-223ENST00000629179 K7ERU9 68 aa7.65□□□□□ -1.18
PNKP-223ENST00000629179 COX6CP09669 75 aa7.65□□□□□ -1.18
PNKP-223ENST00000629179 Q6Q795 121 aa7.65□□□□□ -1.18
PNKP-223ENST00000629179 TEN1Q86WV5 123 aa7.65□□□□□ -1.18
PNKP-223ENST00000629179 LST1O00453 97 aa7.64□□□□□ -1.19
PNKP-223ENST00000629179 DNAL4O96015 105 aa7.64□□□□□ -1.19
PNKP-223ENST00000629179 ORMDL1Q9P0S3 153 aa7.64□□□□□ -1.19
PNKP-223ENST00000629179 A0A087WSZ3 146 aa7.61□□□□□ -1.19
PNKP-223ENST00000629179 A0A1B0GV72 72 aa7.61□□□□□ -1.19
PNKP-223ENST00000629179 RPL37P61927 97 aaKnown RBP7.61□□□□□ -1.19
PNKP-223ENST00000629179 SS18L2Q9UHA2 77 aa7.61□□□□□ -1.19
PNKP-223ENST00000629179 A0A1W2PNM2 257 aa7.6□□□□□ -1.19
PNKP-223ENST00000629179 J3QR89 54 aa7.6□□□□□ -1.19
PNKP-223ENST00000629179 SCGB1C2P0DMR2 95 aa7.6□□□□□ -1.19
PNKP-223ENST00000629179 H3BQ85 93 aa7.59□□□□□ -1.19
PNKP-223ENST00000629179 TMEM256-PLSCR3K7ERE1 68 aa7.58□□□□□ -1.2
PNKP-223ENST00000629179 ANKRD29Q8N6D5 301 aa7.58□□□□□ -1.2
PNKP-223ENST00000629179 OBSCN-AS1Q96MR7 158 aa7.58□□□□□ -1.2
PNKP-223ENST00000629179 NAA38Q9BRA0 125 aaKnown RBP7.58□□□□□ -1.2
PNKP-223ENST00000629179 TRACP01848 142 aa7.57□□□□□ -1.2
PNKP-223ENST00000629179 Q96NJ1 140 aa7.56□□□□□ -1.2
PNKP-223ENST00000629179 ATXN8Q156A1 80 aa7.54□□□□□ -1.2
PNKP-223ENST00000629179 KRTAP19-2Q3LHN2 52 aa7.54□□□□□ -1.2
PNKP-223ENST00000629179 LCE2CQ5TA81 110 aa7.54□□□□□ -1.2
PNKP-223ENST00000629179 TRBV7-4A0A0J9YYF1 115 aa7.52□□□□□ -1.21
PNKP-223ENST00000629179 CCKP06307 115 aa7.51□□□□□ -1.21
PNKP-223ENST00000629179 BAALC-AS2P0C853 105 aa7.5□□□□□ -1.21
PNKP-223ENST00000629179 Q75L30 129 aa7.5□□□□□ -1.21
PNKP-223ENST00000629179 SIGMAR1Q99720 223 aa7.49□□□□□ -1.21
PNKP-223ENST00000629179 PRO0461Q9UI25 63 aa7.49□□□□□ -1.21
PNKP-223ENST00000629179 RBM3P98179 157 aaKnown RBP7.48□□□□□ -1.21
PNKP-223ENST00000629179 ATP11AUNQ6ZP68 121 aa7.48□□□□□ -1.21
PNKP-223ENST00000629179 VPS25Q9BRG1 176 aa7.48□□□□□ -1.21
PNKP-223ENST00000629179 IGKV4-1P06312 121 aa7.47□□□□□ -1.21
PNKP-223ENST00000629179 DSCR10P59022 87 aa7.47□□□□□ -1.21
PNKP-223ENST00000629179 DEFB116Q30KQ4 102 aa7.46□□□□□ -1.22
PNKP-223ENST00000629179 H3BT86 120 aa7.45□□□□□ -1.22
PNKP-223ENST00000629179 ETDBQ3ZM63 59 aa7.45□□□□□ -1.22
PNKP-223ENST00000629179 C20orf166-AS1Q96NR2 134 aa7.45□□□□□ -1.22
PNKP-223ENST00000629179 DSCR8Q96T75 97 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms