RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 H7C2G1 150 aa7□□□□□ -1.29
CBWD3-218ENST00000622755 C14orf144Q96I85 54 aa7□□□□□ -1.29
CBWD3-218ENST00000622755 C12orf57Q99622 126 aa7□□□□□ -1.29
CBWD3-218ENST00000622755 IGLV5-48A0A075B6I7 105 aa6.99□□□□□ -1.29
CBWD3-218ENST00000622755 hADV29S1A0JD25 119 aa6.99□□□□□ -1.29
CBWD3-218ENST00000622755 CD164Q04900 197 aa6.99□□□□□ -1.29
CBWD3-218ENST00000622755 HRCT1Q6UXD1 115 aa6.99□□□□□ -1.29
CBWD3-218ENST00000622755 HIGD1BQ9P298 99 aa6.99□□□□□ -1.29
CBWD3-218ENST00000622755 LPAP08519 4548 aa6.99□□□□□ -1.29
CBWD3-218ENST00000622755 LINC00575Q6W349 94 aa6.97□□□□□ -1.29
CBWD3-218ENST00000622755 KRTAP9-2Q9BYQ4 174 aa6.97□□□□□ -1.29
CBWD3-218ENST00000622755 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.96□□□□□ -1.3
CBWD3-218ENST00000622755 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.94□□□□□ -1.3
CBWD3-218ENST00000622755 Q6ZQY7 126 aa6.94□□□□□ -1.3
CBWD3-218ENST00000622755 A0A0B4J2C4 111 aa6.93□□□□□ -1.3
CBWD3-218ENST00000622755 KRTAP9-6A0A140TA67 174 aa6.93□□□□□ -1.3
CBWD3-218ENST00000622755 KRTAP13-3Q3SY46 172 aa6.93□□□□□ -1.3
CBWD3-218ENST00000622755 PPDPFLQ8WWR9 84 aa6.93□□□□□ -1.3
CBWD3-218ENST00000622755 H0YGX0 51 aa6.93□□□□□ -1.3
CBWD3-218ENST00000622755 LINC01547P58512 204 aaPredicted RBP6.93□□□□□ -1.3
CBWD3-218ENST00000622755 SMIM29Q86T20 159 aa6.93□□□□□ -1.3
CBWD3-218ENST00000622755 SNHG12Q9BXW3 62 aa6.93□□□□□ -1.3
CBWD3-218ENST00000622755 TCL1BO95988 128 aa6.92□□□□□ -1.3
CBWD3-218ENST00000622755 CFC1BP0CG36 223 aa6.92□□□□□ -1.3
CBWD3-218ENST00000622755 CFC1P0CG37 223 aa6.92□□□□□ -1.3
CBWD3-218ENST00000622755 SEC61BP60468 96 aaKnown RBP6.92□□□□□ -1.3
CBWD3-218ENST00000622755 OCIAD2Q56VL3 154 aa6.92□□□□□ -1.3
CBWD3-218ENST00000622755 Q6JHZ5 121 aa6.92□□□□□ -1.3
CBWD3-218ENST00000622755 CEND1Q8N111 149 aa6.92□□□□□ -1.3
CBWD3-218ENST00000622755 TRIAP1O43715 76 aa6.9□□□□□ -1.31
CBWD3-218ENST00000622755 PRO1854Q9UHT4 67 aa6.9□□□□□ -1.31
CBWD3-218ENST00000622755 RNF213Q63HN8 5207 aa6.89□□□□□ -1.31
CBWD3-218ENST00000622755 C2orf91Q6ZV80 131 aa6.89□□□□□ -1.31
CBWD3-218ENST00000622755 Q5XG85 94 aa6.88□□□□□ -1.31
CBWD3-218ENST00000622755 CLEC2BQ92478 149 aa6.88□□□□□ -1.31
CBWD3-218ENST00000622755 HSD52Q0P140 79 aa6.86□□□□□ -1.31
CBWD3-218ENST00000622755 PYY3Q5JQD4 70 aa6.86□□□□□ -1.31
CBWD3-218ENST00000622755 A0A1B0GX51 115 aa6.85□□□□□ -1.31
CBWD3-218ENST00000622755 COX6CP09669 75 aa6.85□□□□□ -1.31
CBWD3-218ENST00000622755 DNAL4O96015 105 aa6.84□□□□□ -1.31
CBWD3-218ENST00000622755 PSMB2P49721 201 aa6.84□□□□□ -1.31
CBWD3-218ENST00000622755 ASB16-AS1Q495Z4 193 aa6.84□□□□□ -1.31
CBWD3-218ENST00000622755 UQCR10Q9UDW1 63 aa6.84□□□□□ -1.31
CBWD3-218ENST00000622755 IGLV8-61A0A075B6I0 122 aa6.84□□□□□ -1.32
CBWD3-218ENST00000622755 FXYD2P54710 66 aa6.83□□□□□ -1.32
CBWD3-218ENST00000622755 A0A0G2JQZ4 141 aa6.82□□□□□ -1.32
CBWD3-218ENST00000622755 C9orf92A6NGG3 77 aa6.82□□□□□ -1.32
CBWD3-218ENST00000622755 C9orf118A6NHY6 69 aa6.82□□□□□ -1.32
CBWD3-218ENST00000622755 H3BQ85 93 aa6.82□□□□□ -1.32
CBWD3-218ENST00000622755 IGFL1Q6UW32 110 aa6.82□□□□□ -1.32
CBWD3-218ENST00000622755 TRBV7-7A0A0K0K1E9 115 aa6.81□□□□□ -1.32
CBWD3-218ENST00000622755 FABP2P12104 132 aa6.81□□□□□ -1.32
CBWD3-218ENST00000622755 C1orf195Q5TG92 126 aa6.81□□□□□ -1.32
CBWD3-218ENST00000622755 SS18L2Q9UHA2 77 aa6.81□□□□□ -1.32
CBWD3-218ENST00000622755 NDUFV3P56181 108 aaKnown RBP6.79□□□□□ -1.32
CBWD3-218ENST00000622755 KRTAP4-12Q9BQ66 201 aa6.79□□□□□ -1.32
CBWD3-218ENST00000622755 LCE3BQ5TA77 95 aa6.78□□□□□ -1.32
CBWD3-218ENST00000622755 H3BUT2 72 aa6.77□□□□□ -1.33
CBWD3-218ENST00000622755 LST1O00453 97 aa6.77□□□□□ -1.33
CBWD3-218ENST00000622755 FAM218AQ96MZ4 157 aa6.77□□□□□ -1.33
CBWD3-218ENST00000622755 ORMDL1Q9P0S3 153 aa6.77□□□□□ -1.33
CBWD3-218ENST00000622755 H3BMG7 143 aa6.76□□□□□ -1.33
CBWD3-218ENST00000622755 TEN1Q86WV5 123 aa6.76□□□□□ -1.33
CBWD3-218ENST00000622755 SCGB1C2P0DMR2 95 aa6.76□□□□□ -1.33
CBWD3-218ENST00000622755 TMEM256-PLSCR3K7ERE1 68 aa6.75□□□□□ -1.33
CBWD3-218ENST00000622755 K7ERJ3 54 aa6.74□□□□□ -1.33
CBWD3-218ENST00000622755 Q6Q795 121 aa6.74□□□□□ -1.33
CBWD3-218ENST00000622755 M0R143 59 aa6.72□□□□□ -1.33
CBWD3-218ENST00000622755 PCOTHQ58A44 107 aa6.71□□□□□ -1.34
CBWD3-218ENST00000622755 ANKRD29Q8N6D5 301 aa6.71□□□□□ -1.34
CBWD3-218ENST00000622755 MUC17Q685J3 4493 aa6.7□□□□□ -1.34
CBWD3-218ENST00000622755 MUC2Q02817 5179 aa6.7□□□□□ -1.34
CBWD3-218ENST00000622755 A0A087WSZ3 146 aa6.69□□□□□ -1.34
CBWD3-218ENST00000622755 A0A0A0MQY5 61 aa6.69□□□□□ -1.34
CBWD3-218ENST00000622755 TRACP01848 142 aa6.68□□□□□ -1.34
CBWD3-218ENST00000622755 SMIM6P0DI80 62 aa6.68□□□□□ -1.34
CBWD3-218ENST00000622755 RPL37P61927 97 aaKnown RBP6.68□□□□□ -1.34
CBWD3-218ENST00000622755 UBE2V1Q13404 147 aa6.67□□□□□ -1.34
CBWD3-218ENST00000622755 A0A1B0GV72 72 aa6.66□□□□□ -1.34
CBWD3-218ENST00000622755 TSTD3H0UI37 97 aa6.66□□□□□ -1.34
CBWD3-218ENST00000622755 OBSCN-AS1Q96MR7 158 aa6.66□□□□□ -1.34
CBWD3-218ENST00000622755 TRBV7-4A0A0J9YYF1 115 aa6.65□□□□□ -1.35
CBWD3-218ENST00000622755 LYRM7Q5U5X0 104 aa6.65□□□□□ -1.35
CBWD3-218ENST00000622755 ATP11AUNQ6ZP68 121 aa6.65□□□□□ -1.35
CBWD3-218ENST00000622755 DSCR8Q96T75 97 aa6.65□□□□□ -1.35
CBWD3-218ENST00000622755 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
CBWD3-218ENST00000622755 SIGMAR1Q99720 223 aa6.64□□□□□ -1.35
CBWD3-218ENST00000622755 CCKP06307 115 aa6.63□□□□□ -1.35
CBWD3-218ENST00000622755 RBM3P98179 157 aaKnown RBP6.62□□□□□ -1.35
CBWD3-218ENST00000622755 ATXN8Q156A1 80 aa6.62□□□□□ -1.35
CBWD3-218ENST00000622755 Q96NJ1 140 aa6.62□□□□□ -1.35
CBWD3-218ENST00000622755 KRTAP9-9Q9BYP9 154 aa6.62□□□□□ -1.35
CBWD3-218ENST00000622755 KRTAP9-4Q9BYQ2 154 aa6.62□□□□□ -1.35
CBWD3-218ENST00000622755 A0A1W2PNM2 257 aa6.61□□□□□ -1.35
CBWD3-218ENST00000622755 VPS25Q9BRG1 176 aa6.61□□□□□ -1.35
CBWD3-218ENST00000622755 KRTAP4-1Q9BYQ7 146 aa6.61□□□□□ -1.35
CBWD3-218ENST00000622755 Q75L30 129 aa6.6□□□□□ -1.35
CBWD3-218ENST00000622755 IGKV4-1P06312 121 aa6.59□□□□□ -1.35
CBWD3-218ENST00000622755 BAALC-AS2P0C853 105 aa6.59□□□□□ -1.35
CBWD3-218ENST00000622755 C9JAW5 83 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms