RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CFAP47Q6ZTR5 3102 aa10.25□□□□□ -0.77
GABRB3-215ENST00000622697 USP34Q70CQ2 3546 aa10.25□□□□□ -0.77
GABRB3-215ENST00000622697 COL12A1Q99715 3063 aa10.24□□□□□ -0.77
GABRB3-215ENST00000622697 SPRR4Q96PI1 79 aa10.24□□□□□ -0.77
GABRB3-215ENST00000622697 CYSTM1Q9H1C7 97 aa10.23□□□□□ -0.77
GABRB3-215ENST00000622697 UNC79Q9P2D8 2635 aa10.23□□□□□ -0.77
GABRB3-215ENST00000622697 IGLV5-37A0A075B6J1 123 aa10.22□□□□□ -0.77
GABRB3-215ENST00000622697 OCR1Q9BZK8 76 aa10.22□□□□□ -0.77
GABRB3-215ENST00000622697 TACC2O95359 2948 aa10.21□□□□□ -0.78
GABRB3-215ENST00000622697 SMR3BP02814 79 aaPredicted RBP10.2□□□□□ -0.78
GABRB3-215ENST00000622697 IGLV7-43P04211 117 aa10.19□□□□□ -0.78
GABRB3-215ENST00000622697 C9orf92A6NGG3 77 aa10.18□□□□□ -0.78
GABRB3-215ENST00000622697 SSBP3-AS1Q7Z2R9 100 aa10.18□□□□□ -0.78
GABRB3-215ENST00000622697 NOTCH1P46531 2555 aa10.15□□□□□ -0.78
GABRB3-215ENST00000622697 SETXQ7Z333 2677 aaKnown RBP10.15□□□□□ -0.78
GABRB3-215ENST00000622697 CYP4F30PQ9H0H9 118 aa10.14□□□□□ -0.79
GABRB3-215ENST00000622697 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.14□□□□□ -0.79
GABRB3-215ENST00000622697 UBR5O95071 2799 aaPredicted RBP10.14□□□□□ -0.79
GABRB3-215ENST00000622697 FLNCQ14315 2725 aa10.12□□□□□ -0.79
GABRB3-215ENST00000622697 LINC00304Q8N9R0 145 aa10.11□□□□□ -0.79
GABRB3-215ENST00000622697 ZZEF1O43149 2961 aa10.11□□□□□ -0.79
GABRB3-215ENST00000622697 LOC400499M0QZD8 3231 aa10.1□□□□□ -0.79
GABRB3-215ENST00000622697 ITPR1Q14643 2758 aa10.1□□□□□ -0.79
GABRB3-215ENST00000622697 COL6A5A8TX70 2615 aa10.1□□□□□ -0.79
GABRB3-215ENST00000622697 WIPF1O43516 503 aa10.09□□□□□ -0.79
GABRB3-215ENST00000622697 UQCR11O14957 56 aa10.06□□□□□ -0.8
GABRB3-215ENST00000622697 TNP2Q05952 138 aa10.06□□□□□ -0.8
GABRB3-215ENST00000622697 ASH1LQ9NR48 2969 aaKnown RBP10.06□□□□□ -0.8
GABRB3-215ENST00000622697 STAB1Q9NY15 2570 aa10.05□□□□□ -0.8
GABRB3-215ENST00000622697 SPANXA2-OT1Q8N9U9 137 aa10.04□□□□□ -0.8
GABRB3-215ENST00000622697 FAM229BQ4G0N7 80 aa10.04□□□□□ -0.8
GABRB3-215ENST00000622697 DMXL1Q9Y485 3027 aa10.03□□□□□ -0.8
GABRB3-215ENST00000622697 Q8N1X5 172 aa10.02□□□□□ -0.8
GABRB3-215ENST00000622697 PRR26Q8N8Z3 221 aa10.02□□□□□ -0.8
GABRB3-215ENST00000622697 SPRR1AP35321 89 aa10.02□□□□□ -0.81
GABRB3-215ENST00000622697 MIR22HGQ0VDD5 57 aa10.02□□□□□ -0.81
GABRB3-215ENST00000622697 NBEAL1Q6ZS30 2694 aa10.01□□□□□ -0.81
GABRB3-215ENST00000622697 KRTAP26-1Q6PEX3 210 aa10.01□□□□□ -0.81
GABRB3-215ENST00000622697 KRTAP1-5Q9BYS1 174 aa10□□□□□ -0.81
GABRB3-215ENST00000622697 Q5XG85 94 aa9.97□□□□□ -0.81
GABRB3-215ENST00000622697 TNRC18O15417 2968 aaPredicted RBP9.96□□□□□ -0.81
GABRB3-215ENST00000622697 WDFY3Q8IZQ1 3526 aa9.96□□□□□ -0.82
GABRB3-215ENST00000622697 FP248Q71RG6 208 aaPredicted RBP9.93□□□□□ -0.82
GABRB3-215ENST00000622697 MMP24-AS1A0A0U1RRL7 71 aa9.93□□□□□ -0.82
GABRB3-215ENST00000622697 Q1T7F1 81 aa9.92□□□□□ -0.82
GABRB3-215ENST00000622697 UTP20O75691 2785 aaKnown RBP9.91□□□□□ -0.82
GABRB3-215ENST00000622697 IGLV7-46A0A075B6I9 117 aa9.89□□□□□ -0.83
GABRB3-215ENST00000622697 OXTP01178 125 aa9.89□□□□□ -0.83
GABRB3-215ENST00000622697 HRES1P13985 223 aa9.86□□□□□ -0.83
GABRB3-215ENST00000622697 KTN1-AS1Q86SY8 53 aa9.86□□□□□ -0.83
GABRB3-215ENST00000622697 LINC00472Q9H8W2 130 aa9.86□□□□□ -0.83
GABRB3-215ENST00000622697 CDC42SE1Q9NRR8 79 aa9.86□□□□□ -0.83
GABRB3-215ENST00000622697 Q8N9P0 234 aaPredicted RBP9.85□□□□□ -0.83
GABRB3-215ENST00000622697 SPINT4Q6UDR6 99 aa9.83□□□□□ -0.84
GABRB3-215ENST00000622697 CD164Q04900 197 aa9.83□□□□□ -0.84
GABRB3-215ENST00000622697 PLAC8Q9NZF1 115 aa9.83□□□□□ -0.84
GABRB3-215ENST00000622697 ZANQ9Y493 2812 aa9.82□□□□□ -0.84
GABRB3-215ENST00000622697 NSD1Q96L73 2696 aaPredicted RBP9.8□□□□□ -0.84
GABRB3-215ENST00000622697 A0A0D9SG42 100 aa9.8□□□□□ -0.84
GABRB3-215ENST00000622697 ITPR2Q14571 2701 aa9.8□□□□□ -0.84
GABRB3-215ENST00000622697 BAHCC1Q9P281 2608 aa9.79□□□□□ -0.84
GABRB3-215ENST00000622697 SPRR1BP22528 89 aa9.79□□□□□ -0.84
GABRB3-215ENST00000622697 PANO1I0J062 215 aa9.78□□□□□ -0.84
GABRB3-215ENST00000622697 J3QL48 77 aa9.77□□□□□ -0.85
GABRB3-215ENST00000622697 KRTAP4-16G5E9R7 235 aaPredicted RBP9.76□□□□□ -0.85
GABRB3-215ENST00000622697 HIVEP1P15822 2718 aa9.76□□□□□ -0.85
GABRB3-215ENST00000622697 CELSR2Q9HCU4 2923 aa9.76□□□□□ -0.85
GABRB3-215ENST00000622697 HRNRQ86YZ3 2850 aaPredicted RBP9.73□□□□□ -0.85
GABRB3-215ENST00000622697 ASPMQ8IZT6 3477 aa9.73□□□□□ -0.85
GABRB3-215ENST00000622697 Q75L30 129 aa9.72□□□□□ -0.85
GABRB3-215ENST00000622697 LCA10Q71F78 164 aa9.71□□□□□ -0.85
GABRB3-215ENST00000622697 ZFHX4Q86UP3 3567 aa9.71□□□□□ -0.86
GABRB3-215ENST00000622697 DCHS1Q96JQ0 3298 aa9.7□□□□□ -0.86
GABRB3-215ENST00000622697 RELNP78509 3460 aa9.7□□□□□ -0.86
GABRB3-215ENST00000622697 Q5VV11 94 aa9.7□□□□□ -0.86
GABRB3-215ENST00000622697 Q5W150 140 aa9.69□□□□□ -0.86
GABRB3-215ENST00000622697 COX6B2Q6YFQ2 88 aa9.69□□□□□ -0.86
GABRB3-215ENST00000622697 LINC01554Q52M75 96 aa9.69□□□□□ -0.86
GABRB3-215ENST00000622697 APCP25054 2843 aa9.68□□□□□ -0.86
GABRB3-215ENST00000622697 STAB2Q8WWQ8 2551 aa9.68□□□□□ -0.86
GABRB3-215ENST00000622697 LINC01558Q9Y6Z2 57 aa9.68□□□□□ -0.86
GABRB3-215ENST00000622697 KRTAP10-2P60368 255 aa9.66□□□□□ -0.86
GABRB3-215ENST00000622697 CRIPTQ9P021 101 aa9.65□□□□□ -0.86
GABRB3-215ENST00000622697 KRTAP11-1Q8IUC1 163 aa9.64□□□□□ -0.87
GABRB3-215ENST00000622697 SPINK7P58062 85 aa9.64□□□□□ -0.87
GABRB3-215ENST00000622697 CRYBG3Q68DQ2 2970 aa9.63□□□□□ -0.87
GABRB3-215ENST00000622697 FBN2P35556 2912 aa9.63□□□□□ -0.87
GABRB3-215ENST00000622697 LAMA5O15230 3695 aa9.63□□□□□ -0.87
GABRB3-215ENST00000622697 ZCCHC13Q8WW36 166 aaKnown RBP9.62□□□□□ -0.87
GABRB3-215ENST00000622697 DCHS2Q6V1P9 2916 aa9.61□□□□□ -0.87
GABRB3-215ENST00000622697 KRTAP10-1P60331 282 aa9.61□□□□□ -0.87
GABRB3-215ENST00000622697 KRTAP7-1Q8IUC3 87 aa9.61□□□□□ -0.87
GABRB3-215ENST00000622697 RBM12B-AS1Q9P1G2 102 aa9.6□□□□□ -0.87
GABRB3-215ENST00000622697 A0A1B0GU33 70 aa9.59□□□□□ -0.87
GABRB3-215ENST00000622697 PRAC1Q96KF2 57 aa9.58□□□□□ -0.88
GABRB3-215ENST00000622697 KRTAP29-1A8MX34 341 aaPredicted RBP9.57□□□□□ -0.88
GABRB3-215ENST00000622697 DMDP11532 3685 aa9.56□□□□□ -0.88
GABRB3-215ENST00000622697 NF1P21359 2839 aa9.56□□□□□ -0.88
GABRB3-215ENST00000622697 LINC00483Q53H64 154 aa9.56□□□□□ -0.88
GABRB3-215ENST00000622697 A0A087X002 238 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms