RNA–Protein interactions for RNA: ENST00000621161.4

RAB11FIP4-211, Transcript of RAB11 family interacting protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11FIP4, Length 8,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-211ENST00000621161 FP248Q71RG6 208 aaPredicted RBP12.59□□□□□ -0.39
RAB11FIP4-211ENST00000621161 LINC00612Q8N6U2 182 aa12.57□□□□□ -0.4
RAB11FIP4-211ENST00000621161 TRANK1O15050 2925 aa12.55□□□□□ -0.4
RAB11FIP4-211ENST00000621161 ZCCHC13Q8WW36 166 aaKnown RBP12.52□□□□□ -0.41
RAB11FIP4-211ENST00000621161 HELZ2Q9BYK8 2649 aaKnown RBP12.51□□□□□ -0.41
RAB11FIP4-211ENST00000621161 C5orf42Q9H799 3197 aa12.5□□□□□ -0.41
RAB11FIP4-211ENST00000621161 C20orf166-AS1Q96NR2 134 aa12.49□□□□□ -0.41
RAB11FIP4-211ENST00000621161 K7EIL1 84 aa12.49□□□□□ -0.41
RAB11FIP4-211ENST00000621161 NDUFAF8A1L188 74 aa12.46□□□□□ -0.41
RAB11FIP4-211ENST00000621161 UTRNP46939 3433 aa12.45□□□□□ -0.42
RAB11FIP4-211ENST00000621161 GIG44P09565 113 aaPredicted RBP12.45□□□□□ -0.42
RAB11FIP4-211ENST00000621161 KRTAP10-11P60412 298 aa12.44□□□□□ -0.42
RAB11FIP4-211ENST00000621161 STAB2Q8WWQ8 2551 aa12.42□□□□□ -0.42
RAB11FIP4-211ENST00000621161 CHD7Q9P2D1 2997 aa12.4□□□□□ -0.42
RAB11FIP4-211ENST00000621161 CHD6Q8TD26 2715 aa12.38□□□□□ -0.43
RAB11FIP4-211ENST00000621161 ZNF292O60281 2723 aa12.36□□□□□ -0.43
RAB11FIP4-211ENST00000621161 M0QZ58 72 aa12.36□□□□□ -0.43
RAB11FIP4-211ENST00000621161 KRTAP25-1Q3LHN0 102 aa12.34□□□□□ -0.43
RAB11FIP4-211ENST00000621161 SPATA8Q6RVD6 105 aa12.32□□□□□ -0.44
RAB11FIP4-211ENST00000621161 Q5W150 140 aa12.31□□□□□ -0.44
RAB11FIP4-211ENST00000621161 GCN1Q92616 2671 aaKnown RBP12.31□□□□□ -0.44
RAB11FIP4-211ENST00000621161 MMP24-AS1A0A0U1RRL7 71 aa12.28□□□□□ -0.44
RAB11FIP4-211ENST00000621161 A0A0C4DFX4 3053 aa12.28□□□□□ -0.44
RAB11FIP4-211ENST00000621161 CASC10Q5T4H9 136 aa12.27□□□□□ -0.45
RAB11FIP4-211ENST00000621161 LAMA2P24043 3122 aaKnown RBP12.24□□□□□ -0.45
RAB11FIP4-211ENST00000621161 CFAP54Q96N23 3096 aa12.23□□□□□ -0.45
RAB11FIP4-211ENST00000621161 MAP1AP78559 2803 aaPredicted RBP12.21□□□□□ -0.45
RAB11FIP4-211ENST00000621161 Q8NDZ9 215 aa12.19□□□□□ -0.46
RAB11FIP4-211ENST00000621161 TEX15Q9BXT5 2789 aa12.18□□□□□ -0.46
RAB11FIP4-211ENST00000621161 CHD9Q3L8U1 2897 aa12.16□□□□□ -0.46
RAB11FIP4-211ENST00000621161 KMT2BQ9UMN6 2715 aaPredicted RBP12.15□□□□□ -0.46
RAB11FIP4-211ENST00000621161 NOTCH1P46531 2555 aa12.12□□□□□ -0.47
RAB11FIP4-211ENST00000621161 ADM2Q7Z4H4 148 aa12.12□□□□□ -0.47
RAB11FIP4-211ENST00000621161 Q6ZR54 194 aa12.12□□□□□ -0.47
RAB11FIP4-211ENST00000621161 UNC79Q9P2D8 2635 aa12.1□□□□□ -0.47
RAB11FIP4-211ENST00000621161 A0A096LNT2 108 aa12.1□□□□□ -0.47
RAB11FIP4-211ENST00000621161 CYSTM1Q9H1C7 97 aa12.06□□□□□ -0.48
RAB11FIP4-211ENST00000621161 LINC00472Q9H8W2 130 aa12.04□□□□□ -0.48
RAB11FIP4-211ENST00000621161 BAHCC1Q9P281 2608 aa12.04□□□□□ -0.48
RAB11FIP4-211ENST00000621161 MGAQ8IWI9 3026 aa12.03□□□□□ -0.48
RAB11FIP4-211ENST00000621161 A6NN06 94 aa12.03□□□□□ -0.48
RAB11FIP4-211ENST00000621161 PLAC8Q9NZF1 115 aa12.01□□□□□ -0.49
RAB11FIP4-211ENST00000621161 COL6A5A8TX70 2615 aa11.97□□□□□ -0.49
RAB11FIP4-211ENST00000621161 RANBP2P49792 3224 aaKnown RBP11.96□□□□□ -0.49
RAB11FIP4-211ENST00000621161 TEP1Q99973 2627 aaKnown RBP11.96□□□□□ -0.5
RAB11FIP4-211ENST00000621161 C10orf95Q9H7T3 257 aa11.95□□□□□ -0.5
RAB11FIP4-211ENST00000621161 PANO1I0J062 215 aa11.93□□□□□ -0.5
RAB11FIP4-211ENST00000621161 KRTAP10-3P60369 221 aa11.93□□□□□ -0.5
RAB11FIP4-211ENST00000621161 PP632Q6XCG6 107 aa11.92□□□□□ -0.5
RAB11FIP4-211ENST00000621161 HTTP42858 3142 aa11.92□□□□□ -0.5
RAB11FIP4-211ENST00000621161 OXTP01178 125 aa11.92□□□□□ -0.5
RAB11FIP4-211ENST00000621161 SETXQ7Z333 2677 aaKnown RBP11.91□□□□□ -0.5
RAB11FIP4-211ENST00000621161 VPS13AQ96RL7 3174 aa11.91□□□□□ -0.5
RAB11FIP4-211ENST00000621161 DSPP15924 2871 aaKnown RBP11.91□□□□□ -0.5
RAB11FIP4-211ENST00000621161 ITPR2Q14571 2701 aa11.89□□□□□ -0.51
RAB11FIP4-211ENST00000621161 SPRR1AP35321 89 aa11.87□□□□□ -0.51
RAB11FIP4-211ENST00000621161 Q5VSD8 79 aa11.86□□□□□ -0.51
RAB11FIP4-211ENST00000621161 A0A087X002 238 aa11.84□□□□□ -0.51
RAB11FIP4-211ENST00000621161 SPRR1BP22528 89 aa11.82□□□□□ -0.52
RAB11FIP4-211ENST00000621161 KRTAP26-1Q6PEX3 210 aa11.79□□□□□ -0.52
RAB11FIP4-211ENST00000621161 MKI67P46013 3256 aaKnown RBP11.78□□□□□ -0.52
RAB11FIP4-211ENST00000621161 TRIOO75962 3097 aa11.78□□□□□ -0.52
RAB11FIP4-211ENST00000621161 FRYQ5TBA9 3013 aa11.78□□□□□ -0.52
RAB11FIP4-211ENST00000621161 IGSF10Q6WRI0 2623 aa11.73□□□□□ -0.53
RAB11FIP4-211ENST00000621161 NSD1Q96L73 2696 aaPredicted RBP11.72□□□□□ -0.53
RAB11FIP4-211ENST00000621161 NBEAL2Q6ZNJ1 2754 aa11.72□□□□□ -0.53
RAB11FIP4-211ENST00000621161 A8MUU9 505 aa11.71□□□□□ -0.54
RAB11FIP4-211ENST00000621161 TNP1P09430 55 aa11.7□□□□□ -0.54
RAB11FIP4-211ENST00000621161 LAMA3Q16787 3333 aa11.69□□□□□ -0.54
RAB11FIP4-211ENST00000621161 KRTAP1-3Q8IUG1 177 aa11.66□□□□□ -0.54
RAB11FIP4-211ENST00000621161 WDFY4Q6ZS81 3184 aa11.66□□□□□ -0.54
RAB11FIP4-211ENST00000621161 FLNCQ14315 2725 aa11.63□□□□□ -0.55
RAB11FIP4-211ENST00000621161 APCP25054 2843 aa11.63□□□□□ -0.55
RAB11FIP4-211ENST00000621161 P0C880 135 aa11.62□□□□□ -0.55
RAB11FIP4-211ENST00000621161 UBR5O95071 2799 aaPredicted RBP11.61□□□□□ -0.55
RAB11FIP4-211ENST00000621161 KRTAP1-1Q07627 177 aa11.56□□□□□ -0.56
RAB11FIP4-211ENST00000621161 ITPR1Q14643 2758 aa11.56□□□□□ -0.56
RAB11FIP4-211ENST00000621161 PRUNE2Q8WUY3 3088 aa11.54□□□□□ -0.56
RAB11FIP4-211ENST00000621161 A8MU10 97 aa11.54□□□□□ -0.56
RAB11FIP4-211ENST00000621161 FRYLO94915 3013 aa11.53□□□□□ -0.56
RAB11FIP4-211ENST00000621161 UTP20O75691 2785 aaKnown RBP11.5□□□□□ -0.57
RAB11FIP4-211ENST00000621161 BRCA2P51587 3418 aa11.5□□□□□ -0.57
RAB11FIP4-211ENST00000621161 KRTAP11-1Q8IUC1 163 aa11.49□□□□□ -0.57
RAB11FIP4-211ENST00000621161 KALRNO60229 2985 aa11.47□□□□□ -0.57
RAB11FIP4-211ENST00000621161 NBEAQ8NFP9 2946 aa11.46□□□□□ -0.57
RAB11FIP4-211ENST00000621161 XIRP2A4UGR9 3374 aa11.46□□□□□ -0.57
RAB11FIP4-211ENST00000621161 KRTAP29-1A8MX34 341 aaPredicted RBP11.42□□□□□ -0.58
RAB11FIP4-211ENST00000621161 LRBAP50851 2863 aa11.39□□□□□ -0.59
RAB11FIP4-211ENST00000621161 LAMA1P25391 3075 aa11.38□□□□□ -0.59
RAB11FIP4-211ENST00000621161 KRTAP4-16G5E9R7 235 aaPredicted RBP11.38□□□□□ -0.59
RAB11FIP4-211ENST00000621161 KRTAP10-1P60331 282 aa11.36□□□□□ -0.59
RAB11FIP4-211ENST00000621161 TACC2O95359 2948 aa11.34□□□□□ -0.59
RAB11FIP4-211ENST00000621161 RPS29P62273 56 aaKnown RBP11.3□□□□□ -0.6
RAB11FIP4-211ENST00000621161 NIPBLQ6KC79 2804 aaeCLIP11.28□□□□□ -0.6
RAB11FIP4-211ENST00000621161 KRTAP10-2P60368 255 aa11.26□□□□□ -0.61
RAB11FIP4-211ENST00000621161 KRTAP1-5Q9BYS1 174 aa11.24□□□□□ -0.61
RAB11FIP4-211ENST00000621161 CDH23Q9H251 3354 aa11.24□□□□□ -0.61
RAB11FIP4-211ENST00000621161 LCE6AA0A183 80 aa11.23□□□□□ -0.61
RAB11FIP4-211ENST00000621161 NOTCH2NLQ7Z3S9 236 aa11.23□□□□□ -0.61
RAB11FIP4-211ENST00000621161 CELSR3Q9NYQ7 3312 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms