RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 TRIAP1O43715 76 aa10.42□□□□□ -0.74
LITAF-220ENST00000620789 SNCGO76070 127 aa10.42□□□□□ -0.74
LITAF-220ENST00000620789 FAM218AQ96MZ4 157 aa10.42□□□□□ -0.74
LITAF-220ENST00000620789 PPDPFLQ8WWR9 84 aa10.4□□□□□ -0.74
LITAF-220ENST00000620789 F8WEM9 126 aa10.38□□□□□ -0.75
LITAF-220ENST00000620789 A0A1B0GX51 115 aa10.37□□□□□ -0.75
LITAF-220ENST00000620789 PSMB2P49721 201 aa10.37□□□□□ -0.75
LITAF-220ENST00000620789 HRCT1Q6UXD1 115 aa10.37□□□□□ -0.75
LITAF-220ENST00000620789 IGLV7-46A0A075B6I9 117 aa10.36□□□□□ -0.75
LITAF-220ENST00000620789 TSTD3H0UI37 97 aa10.36□□□□□ -0.75
LITAF-220ENST00000620789 CD164Q04900 197 aa10.36□□□□□ -0.75
LITAF-220ENST00000620789 OCIAD2Q56VL3 154 aa10.36□□□□□ -0.75
LITAF-220ENST00000620789 FP248Q71RG6 208 aaPredicted RBP10.36□□□□□ -0.75
LITAF-220ENST00000620789 M0R143 59 aa10.35□□□□□ -0.75
LITAF-220ENST00000620789 COX6CP09669 75 aa10.34□□□□□ -0.75
LITAF-220ENST00000620789 CLEC2BQ92478 149 aa10.34□□□□□ -0.75
LITAF-220ENST00000620789 LIMD2Q9BT23 127 aa10.34□□□□□ -0.75
LITAF-220ENST00000620789 A0A0G2JQZ4 141 aa10.33□□□□□ -0.76
LITAF-220ENST00000620789 SNHG12Q9BXW3 62 aa10.33□□□□□ -0.76
LITAF-220ENST00000620789 IGLV8-61A0A075B6I0 122 aa10.32□□□□□ -0.76
LITAF-220ENST00000620789 TPRXLQ17RH7 258 aa10.31□□□□□ -0.76
LITAF-220ENST00000620789 GHRHP01286 108 aa10.3□□□□□ -0.76
LITAF-220ENST00000620789 Q6JHZ5 121 aa10.3□□□□□ -0.76
LITAF-220ENST00000620789 DNAL4O96015 105 aa10.27□□□□□ -0.77
LITAF-220ENST00000620789 IGFL1Q6UW32 110 aa10.27□□□□□ -0.77
LITAF-220ENST00000620789 Q5XG85 94 aa10.26□□□□□ -0.77
LITAF-220ENST00000620789 H3BUT2 72 aa10.25□□□□□ -0.77
LITAF-220ENST00000620789 SCGB1C2P0DMR2 95 aa10.25□□□□□ -0.77
LITAF-220ENST00000620789 NDUFV3P56181 108 aaKnown RBP10.25□□□□□ -0.77
LITAF-220ENST00000620789 FABP2P12104 132 aa10.24□□□□□ -0.77
LITAF-220ENST00000620789 CDIP1Q9H305 208 aa10.24□□□□□ -0.77
LITAF-220ENST00000620789 ORMDL1Q9P0S3 153 aa10.24□□□□□ -0.77
LITAF-220ENST00000620789 RNF213Q63HN8 5207 aa10.22□□□□□ -0.77
LITAF-220ENST00000620789 H3BQ85 93 aa10.22□□□□□ -0.77
LITAF-220ENST00000620789 LST1O00453 97 aa10.22□□□□□ -0.77
LITAF-220ENST00000620789 KRTAP13-3Q3SY46 172 aa10.22□□□□□ -0.77
LITAF-220ENST00000620789 TRACP01848 142 aa10.21□□□□□ -0.77
LITAF-220ENST00000620789 TRBV7-7A0A0K0K1E9 115 aa10.19□□□□□ -0.78
LITAF-220ENST00000620789 H3BMG7 143 aa10.19□□□□□ -0.78
LITAF-220ENST00000620789 TCL1BO95988 128 aa10.19□□□□□ -0.78
LITAF-220ENST00000620789 BATFQ16520 125 aa10.19□□□□□ -0.78
LITAF-220ENST00000620789 TMEM256-PLSCR3K7ERE1 68 aa10.18□□□□□ -0.78
LITAF-220ENST00000620789 NAA38Q9BRA0 125 aaKnown RBP10.18□□□□□ -0.78
LITAF-220ENST00000620789 C1orf195Q5TG92 126 aa10.16□□□□□ -0.78
LITAF-220ENST00000620789 Q6Q795 121 aa10.14□□□□□ -0.79
LITAF-220ENST00000620789 ASB16-AS1Q495Z4 193 aa10.13□□□□□ -0.79
LITAF-220ENST00000620789 UBE2V1Q13404 147 aa10.12□□□□□ -0.79
LITAF-220ENST00000620789 ATXN8Q156A1 80 aa10.12□□□□□ -0.79
LITAF-220ENST00000620789 TEN1Q86WV5 123 aa10.12□□□□□ -0.79
LITAF-220ENST00000620789 LYRM7Q5U5X0 104 aa10.1□□□□□ -0.79
LITAF-220ENST00000620789 A0A1B0GV72 72 aa10.09□□□□□ -0.79
LITAF-220ENST00000620789 ANKRD29Q8N6D5 301 aa10.08□□□□□ -0.8
LITAF-220ENST00000620789 BAALC-AS2P0C853 105 aa10.07□□□□□ -0.8
LITAF-220ENST00000620789 SS18L2Q9UHA2 77 aa10.07□□□□□ -0.8
LITAF-220ENST00000620789 MUC17Q685J3 4493 aa10.07□□□□□ -0.8
LITAF-220ENST00000620789 A0A1W2PNM2 257 aa10.06□□□□□ -0.8
LITAF-220ENST00000620789 A0A087WSZ3 146 aa10.05□□□□□ -0.8
LITAF-220ENST00000620789 C9orf118A6NHY6 69 aa10.05□□□□□ -0.8
LITAF-220ENST00000620789 TAX1BP3O14907 124 aa10.05□□□□□ -0.8
LITAF-220ENST00000620789 MUC2Q02817 5179 aa10.04□□□□□ -0.8
LITAF-220ENST00000620789 TRBV20-1A0A075B6N2 111 aa10.04□□□□□ -0.8
LITAF-220ENST00000620789 C9orf92A6NGG3 77 aa10.04□□□□□ -0.8
LITAF-220ENST00000620789 XP32Q5T750 250 aa10.04□□□□□ -0.8
LITAF-220ENST00000620789 TRBV7-4A0A0J9YYF1 115 aa10.02□□□□□ -0.81
LITAF-220ENST00000620789 RBM3P98179 157 aaKnown RBP10.02□□□□□ -0.81
LITAF-220ENST00000620789 A0A1W2PPM0 123 aa10□□□□□ -0.81
LITAF-220ENST00000620789 CCKP06307 115 aa10□□□□□ -0.81
LITAF-220ENST00000620789 DSCR8Q96T75 97 aa9.98□□□□□ -0.81
LITAF-220ENST00000620789 C9JAW5 83 aa9.97□□□□□ -0.81
LITAF-220ENST00000620789 SEC61BP60468 96 aaKnown RBP9.97□□□□□ -0.81
LITAF-220ENST00000620789 Q96NJ1 140 aa9.95□□□□□ -0.82
LITAF-220ENST00000620789 JMJD7-PLA2G4BH0Y9G9 81 aa9.94□□□□□ -0.82
LITAF-220ENST00000620789 COL5A1-AS1Q5SY13 56 aa9.94□□□□□ -0.82
LITAF-220ENST00000620789 VPS25Q9BRG1 176 aa9.93□□□□□ -0.82
LITAF-220ENST00000620789 PCP4L1A6NKN8 68 aa9.89□□□□□ -0.83
LITAF-220ENST00000620789 H3BT86 120 aa9.89□□□□□ -0.83
LITAF-220ENST00000620789 LOC110117498A0A087WWA1 95 aa9.88□□□□□ -0.83
LITAF-220ENST00000620789 Q6ZQT0 140 aa9.88□□□□□ -0.83
LITAF-220ENST00000620789 SPCS1Q9Y6A9 102 aa9.88□□□□□ -0.83
LITAF-220ENST00000620789 OBSCN-AS1Q96MR7 158 aa9.87□□□□□ -0.83
LITAF-220ENST00000620789 PDE6GP18545 87 aa9.86□□□□□ -0.83
LITAF-220ENST00000620789 C21orf62-AS1Q17RA5 79 aa9.86□□□□□ -0.83
LITAF-220ENST00000620789 MTURNQ8N3F0 131 aa9.86□□□□□ -0.83
LITAF-220ENST00000620789 C14orf132Q9NPU4 83 aa9.86□□□□□ -0.83
LITAF-220ENST00000620789 SIGMAR1Q99720 223 aa9.85□□□□□ -0.83
LITAF-220ENST00000620789 LINC00472Q9H8W2 130 aa9.85□□□□□ -0.83
LITAF-220ENST00000620789 IGKV4-1P06312 121 aa9.84□□□□□ -0.83
LITAF-220ENST00000620789 RPL37P61927 97 aaKnown RBP9.84□□□□□ -0.83
LITAF-220ENST00000620789 A0A0U1RQV1 116 aa9.83□□□□□ -0.84
LITAF-220ENST00000620789 PCOTHQ58A44 107 aa9.83□□□□□ -0.84
LITAF-220ENST00000620789 KRTAP4-1Q9BYQ7 146 aa9.83□□□□□ -0.84
LITAF-220ENST00000620789 A0A1B0GW54 56 aa9.81□□□□□ -0.84
LITAF-220ENST00000620789 DEFB116Q30KQ4 102 aa9.81□□□□□ -0.84
LITAF-220ENST00000620789 K7EP34 96 aa9.77□□□□□ -0.85
LITAF-220ENST00000620789 DSCR10P59022 87 aa9.76□□□□□ -0.85
LITAF-220ENST00000620789 Q75L30 129 aa9.76□□□□□ -0.85
LITAF-220ENST00000620789 SMCPP49901 116 aaPredicted RBP9.74□□□□□ -0.85
LITAF-220ENST00000620789 FAT4Q6V0I7 4981 aa9.74□□□□□ -0.85
LITAF-220ENST00000620789 J3KT08 172 aa9.73□□□□□ -0.85
LITAF-220ENST00000620789 LINC00313P59037 77 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms