RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 PCNTO95613 3336 aa3.18□□□□□ -1.9
VPS13D-214ENST00000620676 TNRC18O15417 2968 aaPredicted RBP3.17□□□□□ -1.9
VPS13D-214ENST00000620676 NUPR2A6NF83 97 aa3.17□□□□□ -1.9
VPS13D-214ENST00000620676 TRIOO75962 3097 aa3.17□□□□□ -1.9
VPS13D-214ENST00000620676 LAMA2P24043 3122 aaKnown RBP3.17□□□□□ -1.9
VPS13D-214ENST00000620676 DSPP15924 2871 aaKnown RBP3.16□□□□□ -1.9
VPS13D-214ENST00000620676 Q6ZR54 194 aa3.15□□□□□ -1.9
VPS13D-214ENST00000620676 A0A1B0GU33 70 aa3.15□□□□□ -1.91
VPS13D-214ENST00000620676 KRTAP16-1A8MUX0 517 aa3.15□□□□□ -1.91
VPS13D-214ENST00000620676 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
VPS13D-214ENST00000620676 FAM229AH3BQW9 127 aa3.14□□□□□ -1.91
VPS13D-214ENST00000620676 KRTAP21-3Q3LHN1 58 aa3.14□□□□□ -1.91
VPS13D-214ENST00000620676 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
VPS13D-214ENST00000620676 FRYLO94915 3013 aa3.13□□□□□ -1.91
VPS13D-214ENST00000620676 MMP24-AS1A0A0U1RRL7 71 aa3.12□□□□□ -1.91
VPS13D-214ENST00000620676 SPATA8Q6RVD6 105 aa3.12□□□□□ -1.91
VPS13D-214ENST00000620676 KRTAP10-11P60412 298 aa3.11□□□□□ -1.91
VPS13D-214ENST00000620676 KRTAP10-3P60369 221 aa3.11□□□□□ -1.91
VPS13D-214ENST00000620676 RANBP2P49792 3224 aaKnown RBP3.11□□□□□ -1.91
VPS13D-214ENST00000620676 PRR34Q9NV39 138 aa3.11□□□□□ -1.91
VPS13D-214ENST00000620676 SPRR4Q96PI1 79 aa3.11□□□□□ -1.91
VPS13D-214ENST00000620676 PRUNE2Q8WUY3 3088 aa3.11□□□□□ -1.91
VPS13D-214ENST00000620676 ZCCHC13Q8WW36 166 aaKnown RBP3.11□□□□□ -1.91
VPS13D-214ENST00000620676 HTTP42858 3142 aa3.11□□□□□ -1.91
VPS13D-214ENST00000620676 TLX1NBP0CAT3 122 aa3.1□□□□□ -1.91
VPS13D-214ENST00000620676 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
VPS13D-214ENST00000620676 A0A087X002 238 aa3.1□□□□□ -1.91
VPS13D-214ENST00000620676 NOTCH2NLQ7Z3S9 236 aa3.1□□□□□ -1.91
VPS13D-214ENST00000620676 C19orf73Q9NVV2 129 aa3.1□□□□□ -1.91
VPS13D-214ENST00000620676 IGLV5-37A0A075B6J1 123 aa3.09□□□□□ -1.91
VPS13D-214ENST00000620676 DNAH14Q0VDD8 3507 aa3.09□□□□□ -1.91
VPS13D-214ENST00000620676 TYMSOSQ8TAI1 123 aa3.09□□□□□ -1.91
VPS13D-214ENST00000620676 MGAQ8IWI9 3026 aa3.08□□□□□ -1.92
VPS13D-214ENST00000620676 WDFY4Q6ZS81 3184 aa3.08□□□□□ -1.92
VPS13D-214ENST00000620676 FRYQ5TBA9 3013 aa3.08□□□□□ -1.92
VPS13D-214ENST00000620676 TENM3Q9P273 2699 aa3.08□□□□□ -1.92
VPS13D-214ENST00000620676 NBEAL2Q6ZNJ1 2754 aa3.08□□□□□ -1.92
VPS13D-214ENST00000620676 Q5W150 140 aa3.07□□□□□ -1.92
VPS13D-214ENST00000620676 ITPR1Q14643 2758 aa3.07□□□□□ -1.92
VPS13D-214ENST00000620676 TNP2Q05952 138 aa3.07□□□□□ -1.92
VPS13D-214ENST00000620676 PLA2G2DQ9UNK4 145 aa3.07□□□□□ -1.92
VPS13D-214ENST00000620676 KRTAP25-1Q3LHN0 102 aa3.07□□□□□ -1.92
VPS13D-214ENST00000620676 LINC00472Q9H8W2 130 aa3.07□□□□□ -1.92
VPS13D-214ENST00000620676 VPS13AQ96RL7 3174 aa3.07□□□□□ -1.92
VPS13D-214ENST00000620676 HIVEP1P15822 2718 aa3.06□□□□□ -1.92
VPS13D-214ENST00000620676 FREM2Q5SZK8 3169 aa3.05□□□□□ -1.92
VPS13D-214ENST00000620676 ZNF861PO60384 105 aa3.05□□□□□ -1.92
VPS13D-214ENST00000620676 KRTAP26-1Q6PEX3 210 aa3.05□□□□□ -1.92
VPS13D-214ENST00000620676 ROMO1P60602 79 aa3.05□□□□□ -1.92
VPS13D-214ENST00000620676 KRTAP29-1A8MX34 341 aaPredicted RBP3.05□□□□□ -1.92
VPS13D-214ENST00000620676 DMAC1Q96GE9 116 aa3.05□□□□□ -1.92
VPS13D-214ENST00000620676 ADGRG4Q8IZF6 3080 aa3.04□□□□□ -1.92
VPS13D-214ENST00000620676 IGLV7-43P04211 117 aa3.04□□□□□ -1.92
VPS13D-214ENST00000620676 PSORS1C2Q9UIG4 136 aa3.04□□□□□ -1.92
VPS13D-214ENST00000620676 SMR3BP02814 79 aaPredicted RBP3.03□□□□□ -1.92
VPS13D-214ENST00000620676 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.03□□□□□ -1.92
VPS13D-214ENST00000620676 NBDYA0A0U1RRE5 68 aa3.03□□□□□ -1.92
VPS13D-214ENST00000620676 DMXL2Q8TDJ6 3036 aa3.02□□□□□ -1.93
VPS13D-214ENST00000620676 C5orf42Q9H799 3197 aa3.02□□□□□ -1.93
VPS13D-214ENST00000620676 H1FX-AS1Q4G0G2 97 aa3.02□□□□□ -1.93
VPS13D-214ENST00000620676 KALRNO60229 2985 aa3.02□□□□□ -1.93
VPS13D-214ENST00000620676 CELSR2Q9HCU4 2923 aa3.02□□□□□ -1.93
VPS13D-214ENST00000620676 TACC2O95359 2948 aa3.01□□□□□ -1.93
VPS13D-214ENST00000620676 ASH1LQ9NR48 2969 aaKnown RBP3.01□□□□□ -1.93
VPS13D-214ENST00000620676 NF1P21359 2839 aa3□□□□□ -1.93
VPS13D-214ENST00000620676 A8MUU9 505 aa3□□□□□ -1.93
VPS13D-214ENST00000620676 C10orf95Q9H7T3 257 aa2.99□□□□□ -1.93
VPS13D-214ENST00000620676 LINC00304Q8N9R0 145 aa2.99□□□□□ -1.93
VPS13D-214ENST00000620676 APCP25054 2843 aa2.99□□□□□ -1.93
VPS13D-214ENST00000620676 LCE6AA0A183 80 aa2.99□□□□□ -1.93
VPS13D-214ENST00000620676 BOD1L1Q8NFC6 3051 aa2.99□□□□□ -1.93
VPS13D-214ENST00000620676 KRTAP11-1Q8IUC1 163 aa2.98□□□□□ -1.93
VPS13D-214ENST00000620676 CFAP47Q6ZTR5 3102 aa2.97□□□□□ -1.93
VPS13D-214ENST00000620676 TENM4Q6N022 2769 aa2.97□□□□□ -1.93
VPS13D-214ENST00000620676 PANO1I0J062 215 aa2.97□□□□□ -1.93
VPS13D-214ENST00000620676 SPRR1AP35321 89 aa2.97□□□□□ -1.93
VPS13D-214ENST00000620676 A0A087WTM6 91 aa2.96□□□□□ -1.94
VPS13D-214ENST00000620676 ZZEF1O43149 2961 aa2.96□□□□□ -1.94
VPS13D-214ENST00000620676 XIRP2A4UGR9 3374 aa2.96□□□□□ -1.94
VPS13D-214ENST00000620676 MKI67P46013 3256 aaKnown RBP2.95□□□□□ -1.94
VPS13D-214ENST00000620676 ZANQ9Y493 2812 aa2.95□□□□□ -1.94
VPS13D-214ENST00000620676 SZT2Q5T011 3432 aa2.95□□□□□ -1.94
VPS13D-214ENST00000620676 KRTAP4-16G5E9R7 235 aaPredicted RBP2.94□□□□□ -1.94
VPS13D-214ENST00000620676 KRTAP7-1Q8IUC3 87 aa2.94□□□□□ -1.94
VPS13D-214ENST00000620676 MXRA5Q9NR99 2828 aa2.94□□□□□ -1.94
VPS13D-214ENST00000620676 ATMQ13315 3056 aa2.94□□□□□ -1.94
VPS13D-214ENST00000620676 ASB16-AS1Q495Z4 193 aa2.94□□□□□ -1.94
VPS13D-214ENST00000620676 LINC00483Q53H64 154 aa2.94□□□□□ -1.94
VPS13D-214ENST00000620676 BRCA2P51587 3418 aa2.93□□□□□ -1.94
VPS13D-214ENST00000620676 KRTAP1-5Q9BYS1 174 aa2.93□□□□□ -1.94
VPS13D-214ENST00000620676 RPL37P61927 97 aaKnown RBP2.93□□□□□ -1.94
VPS13D-214ENST00000620676 RPS29P62273 56 aaKnown RBP2.92□□□□□ -1.94
VPS13D-214ENST00000620676 KRTAP24-1Q3LI83 254 aa2.92□□□□□ -1.94
VPS13D-214ENST00000620676 COL12A1Q99715 3063 aa2.91□□□□□ -1.94
VPS13D-214ENST00000620676 S4R3F8 94 aa2.91□□□□□ -1.94
VPS13D-214ENST00000620676 CDH23Q9H251 3354 aa2.91□□□□□ -1.94
VPS13D-214ENST00000620676 CAMK2N1Q7Z7J9 78 aa2.9□□□□□ -1.94
VPS13D-214ENST00000620676 TENM1Q9UKZ4 2725 aa2.9□□□□□ -1.95
VPS13D-214ENST00000620676 LAMA3Q16787 3333 aa2.89□□□□□ -1.95
VPS13D-214ENST00000620676 USP34Q70CQ2 3546 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms