RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 LINC01554Q52M75 96 aa5.51□□□□□ -1.53
C9orf72-206ENST00000619707 C7orf65Q6ZTY9 151 aa5.51□□□□□ -1.53
C9orf72-206ENST00000619707 TENM1Q9UKZ4 2725 aa5.5□□□□□ -1.53
C9orf72-206ENST00000619707 H0Y9P7 68 aa5.5□□□□□ -1.53
C9orf72-206ENST00000619707 CASC10Q5T4H9 136 aa5.5□□□□□ -1.53
C9orf72-206ENST00000619707 RPL37AP61513 92 aaKnown RBP5.5□□□□□ -1.53
C9orf72-206ENST00000619707 PKD1L1Q8TDX9 2849 aa5.49□□□□□ -1.53
C9orf72-206ENST00000619707 CASC2Q6XLA1 102 aa5.49□□□□□ -1.53
C9orf72-206ENST00000619707 SPANXA2-OT1Q8N9U9 137 aa5.49□□□□□ -1.53
C9orf72-206ENST00000619707 INAFM1C9JVW0 142 aa5.49□□□□□ -1.53
C9orf72-206ENST00000619707 H3BPC8 53 aa5.49□□□□□ -1.53
C9orf72-206ENST00000619707 UBE2AP49459 152 aa5.49□□□□□ -1.53
C9orf72-206ENST00000619707 Q5VV11 94 aa5.48□□□□□ -1.53
C9orf72-206ENST00000619707 ATRQ13535 2644 aa5.48□□□□□ -1.53
C9orf72-206ENST00000619707 KRTAP29-1A8MX34 341 aaPredicted RBP5.48□□□□□ -1.53
C9orf72-206ENST00000619707 PRLHP81277 87 aa5.48□□□□□ -1.53
C9orf72-206ENST00000619707 F8P00451 2351 aa5.48□□□□□ -1.53
C9orf72-206ENST00000619707 TENM4Q6N022 2769 aa5.48□□□□□ -1.53
C9orf72-206ENST00000619707 PHF5AQ7RTV0 110 aaKnown RBP5.48□□□□□ -1.53
C9orf72-206ENST00000619707 LIMD2Q9BT23 127 aa5.48□□□□□ -1.53
C9orf72-206ENST00000619707 IGLV8-61A0A075B6I0 122 aa5.47□□□□□ -1.53
C9orf72-206ENST00000619707 H0Y9J4 135 aa5.47□□□□□ -1.53
C9orf72-206ENST00000619707 CHKB-CPT1BH3BT56 60 aa5.47□□□□□ -1.53
C9orf72-206ENST00000619707 PRAC1Q96KF2 57 aa5.46□□□□□ -1.53
C9orf72-206ENST00000619707 TEP1Q99973 2627 aaKnown RBP5.46□□□□□ -1.53
C9orf72-206ENST00000619707 FASNP49327 2511 aaKnown RBP5.46□□□□□ -1.54
C9orf72-206ENST00000619707 Q8N9P0 234 aaPredicted RBP5.46□□□□□ -1.54
C9orf72-206ENST00000619707 PRR15LQ9BU68 103 aa5.46□□□□□ -1.54
C9orf72-206ENST00000619707 KRTAP10-11P60412 298 aa5.45□□□□□ -1.54
C9orf72-206ENST00000619707 J3QL48 77 aa5.45□□□□□ -1.54
C9orf72-206ENST00000619707 C16orf90A8MZG2 172 aa5.45□□□□□ -1.54
C9orf72-206ENST00000619707 CNBPP62633 177 aaKnown RBP5.45□□□□□ -1.54
C9orf72-206ENST00000619707 A8MWP4 228 aa5.44□□□□□ -1.54
C9orf72-206ENST00000619707 IGKV2-24A0A0C4DH68 120 aa5.44□□□□□ -1.54
C9orf72-206ENST00000619707 TRRAPQ9Y4A5 3859 aa5.43□□□□□ -1.54
C9orf72-206ENST00000619707 TENM3Q9P273 2699 aa5.42□□□□□ -1.54
C9orf72-206ENST00000619707 C9orf163Q8N9P6 203 aa5.42□□□□□ -1.54
C9orf72-206ENST00000619707 A0A096LNI7 61 aa5.42□□□□□ -1.54
C9orf72-206ENST00000619707 A6NN06 94 aa5.41□□□□□ -1.54
C9orf72-206ENST00000619707 ATP11AUNQ6ZP68 121 aa5.41□□□□□ -1.54
C9orf72-206ENST00000619707 LINC00472Q9H8W2 130 aa5.41□□□□□ -1.54
C9orf72-206ENST00000619707 BAHCC1Q9P281 2608 aa5.41□□□□□ -1.54
C9orf72-206ENST00000619707 NSD1Q96L73 2696 aaPredicted RBP5.41□□□□□ -1.54
C9orf72-206ENST00000619707 COA5Q86WW8 74 aa5.41□□□□□ -1.54
C9orf72-206ENST00000619707 HELZ2Q9BYK8 2649 aaKnown RBP5.4□□□□□ -1.54
C9orf72-206ENST00000619707 A6NED7 52 aa5.4□□□□□ -1.55
C9orf72-206ENST00000619707 Q75L30 129 aa5.4□□□□□ -1.55
C9orf72-206ENST00000619707 J3QKU1 62 aa5.39□□□□□ -1.55
C9orf72-206ENST00000619707 IGLV7-46A0A075B6I9 117 aa5.38□□□□□ -1.55
C9orf72-206ENST00000619707 MMP24-AS1A0A0U1RRL7 71 aa5.38□□□□□ -1.55
C9orf72-206ENST00000619707 SPRR1BP22528 89 aa5.38□□□□□ -1.55
C9orf72-206ENST00000619707 RETNLBQ9BQ08 111 aa5.38□□□□□ -1.55
C9orf72-206ENST00000619707 LOC101927531A0A1B0GV80 90 aa5.37□□□□□ -1.55
C9orf72-206ENST00000619707 PCOTHQ58A44 107 aa5.37□□□□□ -1.55
C9orf72-206ENST00000619707 IGHV6-1A0A0B4J1U7 121 aa5.36□□□□□ -1.55
C9orf72-206ENST00000619707 OTOGQ6ZRI0 2925 aa5.36□□□□□ -1.55
C9orf72-206ENST00000619707 KRTAP11-1Q8IUC1 163 aa5.35□□□□□ -1.55
C9orf72-206ENST00000619707 TP53AIP1Q9HCN2 124 aa5.35□□□□□ -1.55
C9orf72-206ENST00000619707 FLNBO75369 2602 aaKnown RBP5.34□□□□□ -1.55
C9orf72-206ENST00000619707 CHTF8P0CG12 524 aa5.34□□□□□ -1.55
C9orf72-206ENST00000619707 SPAG11AQ6PDA7 123 aa5.33□□□□□ -1.56
C9orf72-206ENST00000619707 CDC42SE1Q9NRR8 79 aa5.33□□□□□ -1.56
C9orf72-206ENST00000619707 ADM2Q7Z4H4 148 aa5.33□□□□□ -1.56
C9orf72-206ENST00000619707 MOBPQ13875 183 aa5.32□□□□□ -1.56
C9orf72-206ENST00000619707 HECTD1Q9ULT8 2610 aa5.32□□□□□ -1.56
C9orf72-206ENST00000619707 LINC01558Q9Y6Z2 57 aa5.31□□□□□ -1.56
C9orf72-206ENST00000619707 DNAH1Q9P2D7 4330 aa5.31□□□□□ -1.56
C9orf72-206ENST00000619707 KRTAP1-5Q9BYS1 174 aa5.3□□□□□ -1.56
C9orf72-206ENST00000619707 C8orf17Q9NRJ1 99 aa5.3□□□□□ -1.56
C9orf72-206ENST00000619707 SRRM2Q9UQ35 2752 aaKnown RBP5.3□□□□□ -1.56
C9orf72-206ENST00000619707 KMT2BQ9UMN6 2715 aaPredicted RBP5.3□□□□□ -1.56
C9orf72-206ENST00000619707 C14orf177Q52M58 125 aa5.3□□□□□ -1.56
C9orf72-206ENST00000619707 ASB16-AS1Q495Z4 193 aa5.3□□□□□ -1.56
C9orf72-206ENST00000619707 Q6ZR54 194 aa5.3□□□□□ -1.56
C9orf72-206ENST00000619707 IGLV9-49A0A0B4J1Y8 123 aa5.29□□□□□ -1.56
C9orf72-206ENST00000619707 MAST4O15021 2626 aa5.29□□□□□ -1.56
C9orf72-206ENST00000619707 Q96NJ1 140 aa5.29□□□□□ -1.56
C9orf72-206ENST00000619707 ANK2Q01484 3957 aa5.29□□□□□ -1.56
C9orf72-206ENST00000619707 PLAC8Q9NZF1 115 aa5.28□□□□□ -1.56
C9orf72-206ENST00000619707 CDK2AP2O75956 126 aa5.28□□□□□ -1.56
C9orf72-206ENST00000619707 HRES1P13985 223 aa5.27□□□□□ -1.57
C9orf72-206ENST00000619707 UBE2DNLQ8IWF7 75 aa5.26□□□□□ -1.57
C9orf72-206ENST00000619707 A0A1B0GVX0 72 aa5.26□□□□□ -1.57
C9orf72-206ENST00000619707 C1orf134Q5TEV5 83 aa5.26□□□□□ -1.57
C9orf72-206ENST00000619707 SPINK7P58062 85 aa5.25□□□□□ -1.57
C9orf72-206ENST00000619707 KRTAP13-1Q8IUC0 172 aa5.25□□□□□ -1.57
C9orf72-206ENST00000619707 NOTCH1P46531 2555 aa5.25□□□□□ -1.57
C9orf72-206ENST00000619707 MRPL34Q9BQ48 92 aaKnown RBP5.25□□□□□ -1.57
C9orf72-206ENST00000619707 TENM2Q9NT68 2774 aa5.25□□□□□ -1.57
C9orf72-206ENST00000619707 PLA2G1BP04054 148 aaKnown RBP5.23□□□□□ -1.57
C9orf72-206ENST00000619707 KRTAP24-1Q3LI83 254 aa5.23□□□□□ -1.57
C9orf72-206ENST00000619707 STAB1Q9NY15 2570 aa5.23□□□□□ -1.57
C9orf72-206ENST00000619707 PANO1I0J062 215 aa5.22□□□□□ -1.57
C9orf72-206ENST00000619707 DNAH10Q8IVF4 4471 aa5.21□□□□□ -1.57
C9orf72-206ENST00000619707 NBEAL1Q6ZS30 2694 aa5.21□□□□□ -1.57
C9orf72-206ENST00000619707 FBN1P35555 2871 aaKnown RBP5.2□□□□□ -1.58
C9orf72-206ENST00000619707 LINC00483Q53H64 154 aa5.2□□□□□ -1.58
C9orf72-206ENST00000619707 COL6A5A8TX70 2615 aa5.2□□□□□ -1.58
C9orf72-206ENST00000619707 A0A087X002 238 aa5.2□□□□□ -1.58
C9orf72-206ENST00000619707 NOTCH2NLQ7Z3S9 236 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms