RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 C9orf92A6NGG3 77 aa6.2□□□□□ -1.42
CUL4A-212ENST00000617546 F8P00451 2351 aa6.2□□□□□ -1.42
CUL4A-212ENST00000617546 CDH23Q9H251 3354 aa6.2□□□□□ -1.42
CUL4A-212ENST00000617546 PRUNE2Q8WUY3 3088 aa6.19□□□□□ -1.42
CUL4A-212ENST00000617546 A0A0D9SG42 100 aa6.19□□□□□ -1.42
CUL4A-212ENST00000617546 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.19□□□□□ -1.42
CUL4A-212ENST00000617546 POLQO75417 2590 aa6.18□□□□□ -1.42
CUL4A-212ENST00000617546 ROMO1P60602 79 aa6.18□□□□□ -1.42
CUL4A-212ENST00000617546 SETD2Q9BYW2 2564 aaPredicted RBP6.17□□□□□ -1.42
CUL4A-212ENST00000617546 ACANP16112 2415 aa6.16□□□□□ -1.42
CUL4A-212ENST00000617546 XIRP2A4UGR9 3374 aa6.15□□□□□ -1.42
CUL4A-212ENST00000617546 H1FX-AS1Q4G0G2 97 aa6.15□□□□□ -1.43
CUL4A-212ENST00000617546 LAMA3Q16787 3333 aa6.14□□□□□ -1.43
CUL4A-212ENST00000617546 RANBP2P49792 3224 aaKnown RBP6.14□□□□□ -1.43
CUL4A-212ENST00000617546 RPL37P61927 97 aaKnown RBP6.14□□□□□ -1.43
CUL4A-212ENST00000617546 A0A0A0MQY5 61 aa6.13□□□□□ -1.43
CUL4A-212ENST00000617546 MUC3AQ02505 3323 aa6.12□□□□□ -1.43
CUL4A-212ENST00000617546 COL6A3P12111 3177 aa6.11□□□□□ -1.43
CUL4A-212ENST00000617546 TRANK1O15050 2925 aa6.11□□□□□ -1.43
CUL4A-212ENST00000617546 CHD9Q3L8U1 2897 aa6.11□□□□□ -1.43
CUL4A-212ENST00000617546 FLNBO75369 2602 aaKnown RBP6.09□□□□□ -1.43
CUL4A-212ENST00000617546 CHD7Q9P2D1 2997 aa6.09□□□□□ -1.43
CUL4A-212ENST00000617546 KRTAP25-1Q3LHN0 102 aa6.08□□□□□ -1.44
CUL4A-212ENST00000617546 UNC80Q8N2C7 3258 aa6.08□□□□□ -1.44
CUL4A-212ENST00000617546 S4R3F8 94 aa6.07□□□□□ -1.44
CUL4A-212ENST00000617546 HECTD1Q9ULT8 2610 aa6.07□□□□□ -1.44
CUL4A-212ENST00000617546 HELZ2Q9BYK8 2649 aaKnown RBP6.02□□□□□ -1.45
CUL4A-212ENST00000617546 COX6B2Q6YFQ2 88 aa6.01□□□□□ -1.45
CUL4A-212ENST00000617546 KRTAP1-5Q9BYS1 174 aa6□□□□□ -1.45
CUL4A-212ENST00000617546 VCANP13611 3396 aa5.99□□□□□ -1.45
CUL4A-212ENST00000617546 RPS29P62273 56 aaKnown RBP5.99□□□□□ -1.45
CUL4A-212ENST00000617546 PANO1I0J062 215 aa5.98□□□□□ -1.45
CUL4A-212ENST00000617546 ZNF292O60281 2723 aa5.98□□□□□ -1.45
CUL4A-212ENST00000617546 KRTAP16-1A8MUX0 517 aa5.97□□□□□ -1.45
CUL4A-212ENST00000617546 DMDP11532 3685 aa5.96□□□□□ -1.45
CUL4A-212ENST00000617546 Q6ZSA8 131 aa5.96□□□□□ -1.46
CUL4A-212ENST00000617546 KRTAP7-1Q8IUC3 87 aa5.95□□□□□ -1.46
CUL4A-212ENST00000617546 KRTAP13-1Q8IUC0 172 aa5.95□□□□□ -1.46
CUL4A-212ENST00000617546 C5orf42Q9H799 3197 aa5.95□□□□□ -1.46
CUL4A-212ENST00000617546 CAMK2N1Q7Z7J9 78 aa5.94□□□□□ -1.46
CUL4A-212ENST00000617546 USP34Q70CQ2 3546 aa5.94□□□□□ -1.46
CUL4A-212ENST00000617546 FLNAP21333 2647 aaKnown RBP5.94□□□□□ -1.46
CUL4A-212ENST00000617546 A8MU10 97 aa5.93□□□□□ -1.46
CUL4A-212ENST00000617546 SMR3BP02814 79 aaPredicted RBP5.93□□□□□ -1.46
CUL4A-212ENST00000617546 PRRC2CQ9Y520 2896 aaKnown RBP5.93□□□□□ -1.46
CUL4A-212ENST00000617546 NOTCH2NLQ7Z3S9 236 aa5.92□□□□□ -1.46
CUL4A-212ENST00000617546 ITPR3Q14573 2671 aa5.91□□□□□ -1.46
CUL4A-212ENST00000617546 A0A0C4DFX4 3053 aa5.91□□□□□ -1.46
CUL4A-212ENST00000617546 USP24Q9UPU5 2620 aa5.91□□□□□ -1.46
CUL4A-212ENST00000617546 ADM2Q7Z4H4 148 aa5.9□□□□□ -1.47
CUL4A-212ENST00000617546 CFAP46Q8IYW2 2715 aa5.89□□□□□ -1.47
CUL4A-212ENST00000617546 MYO15AQ9UKN7 3530 aa5.87□□□□□ -1.47
CUL4A-212ENST00000617546 R4GN34 69 aa5.86□□□□□ -1.47
CUL4A-212ENST00000617546 KRTAP11-1Q8IUC1 163 aa5.85□□□□□ -1.47
CUL4A-212ENST00000617546 J3QL48 77 aa5.84□□□□□ -1.47
CUL4A-212ENST00000617546 TRIOO75962 3097 aa5.81□□□□□ -1.48
CUL4A-212ENST00000617546 M0QZ58 72 aa5.81□□□□□ -1.48
CUL4A-212ENST00000617546 Q6ZRN7 208 aaPredicted RBP5.81□□□□□ -1.48
CUL4A-212ENST00000617546 MGAM2Q2M2H8 2515 aa5.8□□□□□ -1.48
CUL4A-212ENST00000617546 WDFY4Q6ZS81 3184 aa5.79□□□□□ -1.48
CUL4A-212ENST00000617546 ATRQ13535 2644 aa5.79□□□□□ -1.48
CUL4A-212ENST00000617546 WDFY3Q8IZQ1 3526 aa5.78□□□□□ -1.48
CUL4A-212ENST00000617546 KRTAP10-1P60331 282 aa5.77□□□□□ -1.49
CUL4A-212ENST00000617546 MAST4O15021 2626 aa5.77□□□□□ -1.49
CUL4A-212ENST00000617546 A8MUU9 505 aa5.77□□□□□ -1.49
CUL4A-212ENST00000617546 SEC61BP60468 96 aaKnown RBP5.74□□□□□ -1.49
CUL4A-212ENST00000617546 NDUFAF8A1L188 74 aa5.74□□□□□ -1.49
CUL4A-212ENST00000617546 IGSF10Q6WRI0 2623 aa5.73□□□□□ -1.49
CUL4A-212ENST00000617546 UNC79Q9P2D8 2635 aa5.72□□□□□ -1.49
CUL4A-212ENST00000617546 KRTAP10-2P60368 255 aa5.72□□□□□ -1.49
CUL4A-212ENST00000617546 KRTAP13-2Q52LG2 175 aa5.71□□□□□ -1.49
CUL4A-212ENST00000617546 CENPEQ02224 2701 aa5.71□□□□□ -1.5
CUL4A-212ENST00000617546 DNAH14Q0VDD8 3507 aa5.71□□□□□ -1.5
CUL4A-212ENST00000617546 AKAP13Q12802 2813 aa5.69□□□□□ -1.5
CUL4A-212ENST00000617546 BAHCC1Q9P281 2608 aa5.69□□□□□ -1.5
CUL4A-212ENST00000617546 FRYLO94915 3013 aa5.69□□□□□ -1.5
CUL4A-212ENST00000617546 C20orf166-AS1Q96NR2 134 aa5.69□□□□□ -1.5
CUL4A-212ENST00000617546 MGAQ8IWI9 3026 aa5.68□□□□□ -1.5
CUL4A-212ENST00000617546 DCHS1Q96JQ0 3298 aa5.68□□□□□ -1.5
CUL4A-212ENST00000617546 KRTAP21-3Q3LHN1 58 aa5.68□□□□□ -1.5
CUL4A-212ENST00000617546 VPS13AQ96RL7 3174 aa5.67□□□□□ -1.5
CUL4A-212ENST00000617546 PLAC4Q8WY50 150 aa5.63□□□□□ -1.51
CUL4A-212ENST00000617546 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
CUL4A-212ENST00000617546 H0YAA0 97 aa5.62□□□□□ -1.51
CUL4A-212ENST00000617546 DSPP15924 2871 aaKnown RBP5.62□□□□□ -1.51
CUL4A-212ENST00000617546 LAMA1P25391 3075 aa5.61□□□□□ -1.51
CUL4A-212ENST00000617546 TEP1Q99973 2627 aaKnown RBP5.59□□□□□ -1.51
CUL4A-212ENST00000617546 DMXL1Q9Y485 3027 aa5.59□□□□□ -1.51
CUL4A-212ENST00000617546 ASPMQ8IZT6 3477 aa5.59□□□□□ -1.51
CUL4A-212ENST00000617546 CFAP54Q96N23 3096 aa5.59□□□□□ -1.51
CUL4A-212ENST00000617546 ZFHX4Q86UP3 3567 aa5.59□□□□□ -1.52
CUL4A-212ENST00000617546 CHD6Q8TD26 2715 aa5.58□□□□□ -1.52
CUL4A-212ENST00000617546 COL6A5A8TX70 2615 aa5.57□□□□□ -1.52
CUL4A-212ENST00000617546 Q5VSD8 79 aa5.57□□□□□ -1.52
CUL4A-212ENST00000617546 KRTAP13-3Q3SY46 172 aa5.56□□□□□ -1.52
CUL4A-212ENST00000617546 STAB1Q9NY15 2570 aa5.55□□□□□ -1.52
CUL4A-212ENST00000617546 TEX15Q9BXT5 2789 aa5.54□□□□□ -1.52
CUL4A-212ENST00000617546 SPEGQ15772 3267 aa5.53□□□□□ -1.52
CUL4A-212ENST00000617546 SPENQ96T58 3664 aaKnown RBP5.53□□□□□ -1.52
CUL4A-212ENST00000617546 BSNQ9UPA5 3926 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms