RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 TNP2Q05952 138 aa11.71□□□□□ -0.54
CDH23-212ENST00000616684 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.7□□□□□ -0.54
CDH23-212ENST00000616684 FLNCQ14315 2725 aa11.7□□□□□ -0.54
CDH23-212ENST00000616684 CELSR3Q9NYQ7 3312 aa11.67□□□□□ -0.54
CDH23-212ENST00000616684 MIR22HGQ0VDD5 57 aa11.67□□□□□ -0.54
CDH23-212ENST00000616684 NSD1Q96L73 2696 aaPredicted RBP11.67□□□□□ -0.54
CDH23-212ENST00000616684 J3QL48 77 aa11.66□□□□□ -0.54
CDH23-212ENST00000616684 NBEAQ8NFP9 2946 aa11.65□□□□□ -0.54
CDH23-212ENST00000616684 ITPR1Q14643 2758 aa11.63□□□□□ -0.55
CDH23-212ENST00000616684 SPRR1AP35321 89 aa11.63□□□□□ -0.55
CDH23-212ENST00000616684 TACC2O95359 2948 aa11.62□□□□□ -0.55
CDH23-212ENST00000616684 LAMA1P25391 3075 aa11.62□□□□□ -0.55
CDH23-212ENST00000616684 KALRNO60229 2985 aa11.6□□□□□ -0.55
CDH23-212ENST00000616684 Q8N1X5 172 aa11.59□□□□□ -0.55
CDH23-212ENST00000616684 ATMQ13315 3056 aa11.59□□□□□ -0.55
CDH23-212ENST00000616684 STAB2Q8WWQ8 2551 aa11.58□□□□□ -0.56
CDH23-212ENST00000616684 CD164Q04900 197 aa11.57□□□□□ -0.56
CDH23-212ENST00000616684 PRR26Q8N8Z3 221 aa11.57□□□□□ -0.56
CDH23-212ENST00000616684 FRYLO94915 3013 aa11.56□□□□□ -0.56
CDH23-212ENST00000616684 COX6B2Q6YFQ2 88 aa11.53□□□□□ -0.56
CDH23-212ENST00000616684 DMXL2Q8TDJ6 3036 aa11.53□□□□□ -0.56
CDH23-212ENST00000616684 FLG2Q5D862 2391 aaPredicted RBP11.51□□□□□ -0.57
CDH23-212ENST00000616684 VCANP13611 3396 aa11.51□□□□□ -0.57
CDH23-212ENST00000616684 BAHCC1Q9P281 2608 aa11.51□□□□□ -0.57
CDH23-212ENST00000616684 KRTAP26-1Q6PEX3 210 aa11.5□□□□□ -0.57
CDH23-212ENST00000616684 COL12A1Q99715 3063 aa11.5□□□□□ -0.57
CDH23-212ENST00000616684 ADGRG4Q8IZF6 3080 aa11.5□□□□□ -0.57
CDH23-212ENST00000616684 SZT2Q5T011 3432 aa11.5□□□□□ -0.57
CDH23-212ENST00000616684 KRTAP1-5Q9BYS1 174 aa11.49□□□□□ -0.57
CDH23-212ENST00000616684 CYSTM1Q9H1C7 97 aa11.49□□□□□ -0.57
CDH23-212ENST00000616684 PLAC8Q9NZF1 115 aa11.49□□□□□ -0.57
CDH23-212ENST00000616684 MMP24-AS1A0A0U1RRL7 71 aa11.48□□□□□ -0.57
CDH23-212ENST00000616684 SPINT4Q6UDR6 99 aa11.47□□□□□ -0.57
CDH23-212ENST00000616684 IGLV7-46A0A075B6I9 117 aa11.47□□□□□ -0.57
CDH23-212ENST00000616684 ITPR2Q14571 2701 aa11.47□□□□□ -0.57
CDH23-212ENST00000616684 BOD1L1Q8NFC6 3051 aa11.46□□□□□ -0.57
CDH23-212ENST00000616684 Q1T7F1 81 aa11.46□□□□□ -0.58
CDH23-212ENST00000616684 SPRR1BP22528 89 aa11.45□□□□□ -0.58
CDH23-212ENST00000616684 FAM229BQ4G0N7 80 aa11.43□□□□□ -0.58
CDH23-212ENST00000616684 CDC42SE1Q9NRR8 79 aa11.43□□□□□ -0.58
CDH23-212ENST00000616684 HRES1P13985 223 aa11.42□□□□□ -0.58
CDH23-212ENST00000616684 KTN1-AS1Q86SY8 53 aa11.42□□□□□ -0.58
CDH23-212ENST00000616684 RBM12B-AS1Q9P1G2 102 aa11.41□□□□□ -0.58
CDH23-212ENST00000616684 LINC00472Q9H8W2 130 aa11.4□□□□□ -0.58
CDH23-212ENST00000616684 CRIPTQ9P021 101 aa11.4□□□□□ -0.58
CDH23-212ENST00000616684 ASH1LQ9NR48 2969 aaKnown RBP11.37□□□□□ -0.59
CDH23-212ENST00000616684 Q8N9P0 234 aaPredicted RBP11.35□□□□□ -0.59
CDH23-212ENST00000616684 A0A0D9SG42 100 aa11.35□□□□□ -0.59
CDH23-212ENST00000616684 Q5XG85 94 aa11.35□□□□□ -0.59
CDH23-212ENST00000616684 DNAH14Q0VDD8 3507 aa11.34□□□□□ -0.59
CDH23-212ENST00000616684 REV3LO60673 3130 aa11.34□□□□□ -0.59
CDH23-212ENST00000616684 UTP20O75691 2785 aaKnown RBP11.34□□□□□ -0.59
CDH23-212ENST00000616684 FP248Q71RG6 208 aaPredicted RBP11.33□□□□□ -0.6
CDH23-212ENST00000616684 LRBAP50851 2863 aa11.32□□□□□ -0.6
CDH23-212ENST00000616684 LINC01554Q52M75 96 aa11.31□□□□□ -0.6
CDH23-212ENST00000616684 LCA10Q71F78 164 aa11.31□□□□□ -0.6
CDH23-212ENST00000616684 DMBT1Q9UGM3 2413 aaPredicted RBP11.29□□□□□ -0.6
CDH23-212ENST00000616684 ZZEF1O43149 2961 aa11.28□□□□□ -0.6
CDH23-212ENST00000616684 ZCCHC13Q8WW36 166 aaKnown RBP11.25□□□□□ -0.61
CDH23-212ENST00000616684 Q75L30 129 aa11.24□□□□□ -0.61
CDH23-212ENST00000616684 Q6ZSA8 131 aa11.23□□□□□ -0.61
CDH23-212ENST00000616684 KRTAP4-16G5E9R7 235 aaPredicted RBP11.23□□□□□ -0.61
CDH23-212ENST00000616684 LINC01558Q9Y6Z2 57 aa11.23□□□□□ -0.61
CDH23-212ENST00000616684 Q5W150 140 aa11.22□□□□□ -0.61
CDH23-212ENST00000616684 HIVEP1P15822 2718 aa11.22□□□□□ -0.61
CDH23-212ENST00000616684 COL6A3P12111 3177 aa11.21□□□□□ -0.61
CDH23-212ENST00000616684 A0A1B0GU33 70 aa11.21□□□□□ -0.61
CDH23-212ENST00000616684 NIPBLQ6KC79 2804 aaeCLIP11.21□□□□□ -0.62
CDH23-212ENST00000616684 CELSR2Q9HCU4 2923 aa11.19□□□□□ -0.62
CDH23-212ENST00000616684 OXTP01178 125 aa11.17□□□□□ -0.62
CDH23-212ENST00000616684 PANO1I0J062 215 aa11.17□□□□□ -0.62
CDH23-212ENST00000616684 CFAP47Q6ZTR5 3102 aa11.15□□□□□ -0.62
CDH23-212ENST00000616684 KMT2BQ9UMN6 2715 aaPredicted RBP11.15□□□□□ -0.62
CDH23-212ENST00000616684 APCP25054 2843 aa11.15□□□□□ -0.63
CDH23-212ENST00000616684 ZANQ9Y493 2812 aa11.14□□□□□ -0.63
CDH23-212ENST00000616684 KRTAP10-1P60331 282 aa11.14□□□□□ -0.63
CDH23-212ENST00000616684 KRTAP10-2P60368 255 aa11.14□□□□□ -0.63
CDH23-212ENST00000616684 LINC00483Q53H64 154 aa11.1□□□□□ -0.63
CDH23-212ENST00000616684 Q5VV11 94 aa11.1□□□□□ -0.63
CDH23-212ENST00000616684 SPINK7P58062 85 aa11.09□□□□□ -0.63
CDH23-212ENST00000616684 SPEGQ15772 3267 aa11.07□□□□□ -0.64
CDH23-212ENST00000616684 EYSQ5T1H1 3165 aa11.06□□□□□ -0.64
CDH23-212ENST00000616684 TENM4Q6N022 2769 aa11.05□□□□□ -0.64
CDH23-212ENST00000616684 Q6ZR54 194 aa11.03□□□□□ -0.64
CDH23-212ENST00000616684 KRTAP29-1A8MX34 341 aaPredicted RBP11.03□□□□□ -0.64
CDH23-212ENST00000616684 DCHS2Q6V1P9 2916 aa11.02□□□□□ -0.65
CDH23-212ENST00000616684 CSAG1Q6PB30 78 aa10.99□□□□□ -0.65
CDH23-212ENST00000616684 LCE6AA0A183 80 aa10.97□□□□□ -0.65
CDH23-212ENST00000616684 DMAC1Q96GE9 116 aa10.95□□□□□ -0.66
CDH23-212ENST00000616684 CAMK2N1Q7Z7J9 78 aa10.94□□□□□ -0.66
CDH23-212ENST00000616684 KRTAP11-1Q8IUC1 163 aa10.94□□□□□ -0.66
CDH23-212ENST00000616684 S4R3F8 94 aa10.94□□□□□ -0.66
CDH23-212ENST00000616684 A0A087X002 238 aa10.93□□□□□ -0.66
CDH23-212ENST00000616684 CRYBG3Q68DQ2 2970 aa10.93□□□□□ -0.66
CDH23-212ENST00000616684 Q5VSD8 79 aa10.92□□□□□ -0.66
CDH23-212ENST00000616684 KRTAP7-1Q8IUC3 87 aa10.91□□□□□ -0.66
CDH23-212ENST00000616684 PRAC1Q96KF2 57 aa10.91□□□□□ -0.66
CDH23-212ENST00000616684 DMXL1Q9Y485 3027 aa10.9□□□□□ -0.66
CDH23-212ENST00000616684 NF1P21359 2839 aa10.88□□□□□ -0.67
CDH23-212ENST00000616684 Q6ZRN7 208 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms