RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 Q5XG85 94 aa12.27□□□□□ -0.45
CBWD3-212ENST00000616550 MUC2Q02817 5179 aa12.26□□□□□ -0.45
CBWD3-212ENST00000616550 SNCGO76070 127 aa12.26□□□□□ -0.45
CBWD3-212ENST00000616550 SEC61BP60468 96 aaKnown RBP12.26□□□□□ -0.45
CBWD3-212ENST00000616550 ASB16-AS1Q495Z4 193 aa12.26□□□□□ -0.45
CBWD3-212ENST00000616550 TMEM238LA0A1B0GVL6 79 aa12.25□□□□□ -0.45
CBWD3-212ENST00000616550 A6NJY4 79 aa12.25□□□□□ -0.45
CBWD3-212ENST00000616550 PYY3Q5JQD4 70 aa12.25□□□□□ -0.45
CBWD3-212ENST00000616550 PPDPFLQ8WWR9 84 aa12.24□□□□□ -0.45
CBWD3-212ENST00000616550 TMA7Q9Y2S6 64 aaKnown RBP12.24□□□□□ -0.45
CBWD3-212ENST00000616550 H0YGX0 51 aa12.23□□□□□ -0.45
CBWD3-212ENST00000616550 Q6JHZ5 121 aa12.23□□□□□ -0.45
CBWD3-212ENST00000616550 OCIAD2Q56VL3 154 aa12.22□□□□□ -0.45
CBWD3-212ENST00000616550 XP32Q5T750 250 aa12.22□□□□□ -0.45
CBWD3-212ENST00000616550 SNHG12Q9BXW3 62 aa12.22□□□□□ -0.45
CBWD3-212ENST00000616550 MUC17Q685J3 4493 aa12.21□□□□□ -0.45
CBWD3-212ENST00000616550 IGLV8-61A0A075B6I0 122 aa12.21□□□□□ -0.45
CBWD3-212ENST00000616550 TCL1BO95988 128 aa12.21□□□□□ -0.45
CBWD3-212ENST00000616550 PRO1854Q9UHT4 67 aa12.21□□□□□ -0.45
CBWD3-212ENST00000616550 C1orf195Q5TG92 126 aa12.2□□□□□ -0.46
CBWD3-212ENST00000616550 FXYD2P54710 66 aa12.18□□□□□ -0.46
CBWD3-212ENST00000616550 CLEC2BQ92478 149 aa12.18□□□□□ -0.46
CBWD3-212ENST00000616550 IGFL1Q6UW32 110 aa12.17□□□□□ -0.46
CBWD3-212ENST00000616550 C9orf92A6NGG3 77 aa12.16□□□□□ -0.46
CBWD3-212ENST00000616550 HSD52Q0P140 79 aa12.15□□□□□ -0.46
CBWD3-212ENST00000616550 FAM218AQ96MZ4 157 aa12.15□□□□□ -0.46
CBWD3-212ENST00000616550 TRBV7-7A0A0K0K1E9 115 aa12.12□□□□□ -0.47
CBWD3-212ENST00000616550 A0A1B0GX51 115 aa12.1□□□□□ -0.47
CBWD3-212ENST00000616550 H3BUT2 72 aa12.1□□□□□ -0.47
CBWD3-212ENST00000616550 GHRHP01286 108 aa12.1□□□□□ -0.47
CBWD3-212ENST00000616550 UQCR10Q9UDW1 63 aa12.1□□□□□ -0.47
CBWD3-212ENST00000616550 TRIAP1O43715 76 aa12.08□□□□□ -0.48
CBWD3-212ENST00000616550 NDUFV3P56181 108 aaKnown RBP12.07□□□□□ -0.48
CBWD3-212ENST00000616550 KRTAP4-1Q9BYQ7 146 aa12.07□□□□□ -0.48
CBWD3-212ENST00000616550 PSMB2P49721 201 aa12.05□□□□□ -0.48
CBWD3-212ENST00000616550 K7ERJ3 54 aa12.04□□□□□ -0.48
CBWD3-212ENST00000616550 FABP2P12104 132 aa12.04□□□□□ -0.48
CBWD3-212ENST00000616550 COX6CP09669 75 aa12.01□□□□□ -0.49
CBWD3-212ENST00000616550 PCOTHQ58A44 107 aa12.01□□□□□ -0.49
CBWD3-212ENST00000616550 LCE2AQ5TA79 106 aaPredicted RBP12.01□□□□□ -0.49
CBWD3-212ENST00000616550 H3BMG7 143 aa12□□□□□ -0.49
CBWD3-212ENST00000616550 DNAL4O96015 105 aa12□□□□□ -0.49
CBWD3-212ENST00000616550 Q6Q795 121 aa11.99□□□□□ -0.49
CBWD3-212ENST00000616550 LST1O00453 97 aa11.98□□□□□ -0.49
CBWD3-212ENST00000616550 TEN1Q86WV5 123 aa11.98□□□□□ -0.49
CBWD3-212ENST00000616550 ORMDL1Q9P0S3 153 aa11.96□□□□□ -0.49
CBWD3-212ENST00000616550 SS18L2Q9UHA2 77 aa11.96□□□□□ -0.49
CBWD3-212ENST00000616550 H3BQ85 93 aa11.95□□□□□ -0.5
CBWD3-212ENST00000616550 FAT4Q6V0I7 4981 aa11.94□□□□□ -0.5
CBWD3-212ENST00000616550 RPL37P61927 97 aaKnown RBP11.92□□□□□ -0.5
CBWD3-212ENST00000616550 TMEM256-PLSCR3K7ERE1 68 aa11.9□□□□□ -0.5
CBWD3-212ENST00000616550 A0A087WSZ3 146 aa11.89□□□□□ -0.51
CBWD3-212ENST00000616550 SCGB1C2P0DMR2 95 aa11.89□□□□□ -0.51
CBWD3-212ENST00000616550 ANKRD29Q8N6D5 301 aa11.87□□□□□ -0.51
CBWD3-212ENST00000616550 OBSCN-AS1Q96MR7 158 aa11.86□□□□□ -0.51
CBWD3-212ENST00000616550 A0A1B0GV72 72 aa11.84□□□□□ -0.51
CBWD3-212ENST00000616550 A0A1W2PNM2 257 aa11.84□□□□□ -0.51
CBWD3-212ENST00000616550 TRACP01848 142 aa11.84□□□□□ -0.51
CBWD3-212ENST00000616550 M0R143 59 aa11.81□□□□□ -0.52
CBWD3-212ENST00000616550 UBE2V1Q13404 147 aa11.81□□□□□ -0.52
CBWD3-212ENST00000616550 TRBV7-4A0A0J9YYF1 115 aa11.79□□□□□ -0.52
CBWD3-212ENST00000616550 SMIM6P0DI80 62 aa11.79□□□□□ -0.52
CBWD3-212ENST00000616550 KRTAP9-2Q9BYQ4 174 aa11.79□□□□□ -0.52
CBWD3-212ENST00000616550 Q96NJ1 140 aa11.77□□□□□ -0.53
CBWD3-212ENST00000616550 Q75L30 129 aa11.76□□□□□ -0.53
CBWD3-212ENST00000616550 CCKP06307 115 aa11.75□□□□□ -0.53
CBWD3-212ENST00000616550 ATP11AUNQ6ZP68 121 aa11.75□□□□□ -0.53
CBWD3-212ENST00000616550 RBM3P98179 157 aaKnown RBP11.72□□□□□ -0.53
CBWD3-212ENST00000616550 LCE2CQ5TA81 110 aa11.72□□□□□ -0.53
CBWD3-212ENST00000616550 BAALC-AS2P0C853 105 aa11.71□□□□□ -0.53
CBWD3-212ENST00000616550 KRTAP19-2Q3LHN2 52 aa11.71□□□□□ -0.53
CBWD3-212ENST00000616550 SIGMAR1Q99720 223 aa11.71□□□□□ -0.53
CBWD3-212ENST00000616550 DSCR8Q96T75 97 aa11.69□□□□□ -0.54
CBWD3-212ENST00000616550 IGKV4-1P06312 121 aa11.68□□□□□ -0.54
CBWD3-212ENST00000616550 TSTD3H0UI37 97 aa11.67□□□□□ -0.54
CBWD3-212ENST00000616550 ATXN8Q156A1 80 aa11.67□□□□□ -0.54
CBWD3-212ENST00000616550 NAA38Q9BRA0 125 aaKnown RBP11.67□□□□□ -0.54
CBWD3-212ENST00000616550 VPS25Q9BRG1 176 aa11.67□□□□□ -0.54
CBWD3-212ENST00000616550 DSCR10P59022 87 aa11.65□□□□□ -0.54
CBWD3-212ENST00000616550 C20orf166-AS1Q96NR2 134 aa11.65□□□□□ -0.54
CBWD3-212ENST00000616550 LINC00313P59037 77 aa11.63□□□□□ -0.55
CBWD3-212ENST00000616550 LINC00472Q9H8W2 130 aa11.63□□□□□ -0.55
CBWD3-212ENST00000616550 A8MUU9 505 aa11.62□□□□□ -0.55
CBWD3-212ENST00000616550 C9JAW5 83 aa11.62□□□□□ -0.55
CBWD3-212ENST00000616550 DEFB116Q30KQ4 102 aa11.62□□□□□ -0.55
CBWD3-212ENST00000616550 MT1HP80294 61 aa11.6□□□□□ -0.55
CBWD3-212ENST00000616550 COX6B2Q6YFQ2 88 aa11.6□□□□□ -0.55
CBWD3-212ENST00000616550 BATFQ16520 125 aa11.59□□□□□ -0.55
CBWD3-212ENST00000616550 LYRM7Q5U5X0 104 aa11.58□□□□□ -0.56
CBWD3-212ENST00000616550 LOC105371267A0A1B0GV96 52 aa11.57□□□□□ -0.56
CBWD3-212ENST00000616550 JMJD7-PLA2G4BH0Y9G9 81 aa11.56□□□□□ -0.56
CBWD3-212ENST00000616550 C21orf62-AS1Q17RA5 79 aa11.56□□□□□ -0.56
CBWD3-212ENST00000616550 TRBV20-1A0A075B6N2 111 aa11.53□□□□□ -0.56
CBWD3-212ENST00000616550 IGHV6-1A0A0B4J1U7 121 aa11.53□□□□□ -0.56
CBWD3-212ENST00000616550 NOTCH2NLQ7Z3S9 236 aa11.51□□□□□ -0.57
CBWD3-212ENST00000616550 KRTAP9-6A0A140TA67 174 aa11.5□□□□□ -0.57
CBWD3-212ENST00000616550 KRTAP16-1A8MUX0 517 aa11.5□□□□□ -0.57
CBWD3-212ENST00000616550 Q6ZQT0 140 aa11.5□□□□□ -0.57
CBWD3-212ENST00000616550 PDE6GP18545 87 aa11.48□□□□□ -0.57
CBWD3-212ENST00000616550 LOC110117498A0A087WWA1 95 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms