RNA–Protein interactions for RNA: ENST00000616289.1

PDLIM2-219, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-219ENST00000616289 SCGB1D4Q6XE38 83 aa5.67□□□□□ -1.5
PDLIM2-219ENST00000616289 M0R2T5 61 aa5.66□□□□□ -1.5
PDLIM2-219ENST00000616289 DLEU1O43261 78 aa5.66□□□□□ -1.5
PDLIM2-219ENST00000616289 PCP4P48539 62 aa5.66□□□□□ -1.5
PDLIM2-219ENST00000616289 IFITM1P13164 125 aa5.65□□□□□ -1.5
PDLIM2-219ENST00000616289 COX6B2Q6YFQ2 88 aa5.65□□□□□ -1.5
PDLIM2-219ENST00000616289 KRTDAPP60985 99 aa5.64□□□□□ -1.51
PDLIM2-219ENST00000616289 MUSTN1Q8IVN3 82 aa5.64□□□□□ -1.51
PDLIM2-219ENST00000616289 COPS9Q8WXC6 57 aa5.64□□□□□ -1.51
PDLIM2-219ENST00000616289 A4D1N5 150 aa5.63□□□□□ -1.51
PDLIM2-219ENST00000616289 SMIM11BQ8TCY0 68 aa5.63□□□□□ -1.51
PDLIM2-219ENST00000616289 TCL1BO95988 128 aa5.62□□□□□ -1.51
PDLIM2-219ENST00000616289 C21orf62-AS1Q17RA5 79 aa5.62□□□□□ -1.51
PDLIM2-219ENST00000616289 Q6ZVH6 145 aa5.62□□□□□ -1.51
PDLIM2-219ENST00000616289 PCP2Q8IVA1 136 aa5.62□□□□□ -1.51
PDLIM2-219ENST00000616289 ATOH7Q8N100 152 aa5.62□□□□□ -1.51
PDLIM2-219ENST00000616289 SNHG12Q9BXW3 62 aa5.62□□□□□ -1.51
PDLIM2-219ENST00000616289 NHP2Q9NX24 153 aaKnown RBP5.62□□□□□ -1.51
PDLIM2-219ENST00000616289 TRAV13-2A0A0B4J235 113 aa5.61□□□□□ -1.51
PDLIM2-219ENST00000616289 C20orf202A1L168 122 aa5.6□□□□□ -1.51
PDLIM2-219ENST00000616289 F8WEM9 126 aa5.59□□□□□ -1.51
PDLIM2-219ENST00000616289 COL5A1-AS1Q5SY13 56 aa5.58□□□□□ -1.52
PDLIM2-219ENST00000616289 Q6ZQY7 126 aa5.58□□□□□ -1.52
PDLIM2-219ENST00000616289 TRBV7-7A0A0K0K1E9 115 aa5.57□□□□□ -1.52
PDLIM2-219ENST00000616289 SCGB1D1O95968 90 aa5.57□□□□□ -1.52
PDLIM2-219ENST00000616289 IGFL1Q6UW32 110 aa5.57□□□□□ -1.52
PDLIM2-219ENST00000616289 LINC00575Q6W349 94 aa5.57□□□□□ -1.52
PDLIM2-219ENST00000616289 CLEC2BQ92478 149 aa5.57□□□□□ -1.52
PDLIM2-219ENST00000616289 OBSCN-AS1Q96MR7 158 aa5.56□□□□□ -1.52
PDLIM2-219ENST00000616289 hADV29S1A0JD25 119 aa5.55□□□□□ -1.52
PDLIM2-219ENST00000616289 VAMP3Q15836 100 aa5.55□□□□□ -1.52
PDLIM2-219ENST00000616289 Q6JHZ5 121 aa5.55□□□□□ -1.52
PDLIM2-219ENST00000616289 Q75L30 129 aa5.55□□□□□ -1.52
PDLIM2-219ENST00000616289 Q6Q795 121 aa5.54□□□□□ -1.52
PDLIM2-219ENST00000616289 VAMP8Q9BV40 100 aa5.54□□□□□ -1.52
PDLIM2-219ENST00000616289 USH2AO75445 5202 aa5.53□□□□□ -1.52
PDLIM2-219ENST00000616289 ATP11AUNQ6ZP68 121 aa5.53□□□□□ -1.52
PDLIM2-219ENST00000616289 OCIAD2Q56VL3 154 aa5.52□□□□□ -1.53
PDLIM2-219ENST00000616289 UQCR10Q9UDW1 63 aa5.51□□□□□ -1.53
PDLIM2-219ENST00000616289 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.5□□□□□ -1.53
PDLIM2-219ENST00000616289 SSPOA2VEC9 5147 aa5.5□□□□□ -1.53
PDLIM2-219ENST00000616289 HSBP1L1C9JCN9 74 aa5.49□□□□□ -1.53
PDLIM2-219ENST00000616289 H3BUT2 72 aa5.49□□□□□ -1.53
PDLIM2-219ENST00000616289 LST1O00453 97 aa5.49□□□□□ -1.53
PDLIM2-219ENST00000616289 UBE2V1Q13404 147 aa5.49□□□□□ -1.53
PDLIM2-219ENST00000616289 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
PDLIM2-219ENST00000616289 BATFQ16520 125 aa5.48□□□□□ -1.53
PDLIM2-219ENST00000616289 PPDPFLQ8WWR9 84 aa5.48□□□□□ -1.53
PDLIM2-219ENST00000616289 Q96NJ1 140 aa5.48□□□□□ -1.53
PDLIM2-219ENST00000616289 SPATA45Q537H7 98 aa5.47□□□□□ -1.53
PDLIM2-219ENST00000616289 BVES-AS1Q5T3Y7 98 aa5.47□□□□□ -1.53
PDLIM2-219ENST00000616289 C20orf166-AS1Q96NR2 134 aa5.47□□□□□ -1.53
PDLIM2-219ENST00000616289 KRTAP9-8Q9BYQ0 159 aa5.47□□□□□ -1.53
PDLIM2-219ENST00000616289 PAM16Q9Y3D7 125 aa5.47□□□□□ -1.53
PDLIM2-219ENST00000616289 A8MUU9 505 aa5.45□□□□□ -1.54
PDLIM2-219ENST00000616289 SS18L2Q9UHA2 77 aa5.45□□□□□ -1.54
PDLIM2-219ENST00000616289 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.44□□□□□ -1.54
PDLIM2-219ENST00000616289 K7ERU9 68 aa5.44□□□□□ -1.54
PDLIM2-219ENST00000616289 CFC1P0CG37 223 aa5.44□□□□□ -1.54
PDLIM2-219ENST00000616289 VPS25Q9BRG1 176 aa5.44□□□□□ -1.54
PDLIM2-219ENST00000616289 TMEM238LA0A1B0GVL6 79 aa5.43□□□□□ -1.54
PDLIM2-219ENST00000616289 HIST1H4GQ99525 98 aa5.43□□□□□ -1.54
PDLIM2-219ENST00000616289 KRTAP9-7A8MTY7 169 aa5.42□□□□□ -1.54
PDLIM2-219ENST00000616289 TRBV20-1A0A075B6N2 111 aa5.41□□□□□ -1.54
PDLIM2-219ENST00000616289 A0A087WSZ3 146 aa5.41□□□□□ -1.54
PDLIM2-219ENST00000616289 COX8AP10176 69 aa5.41□□□□□ -1.54
PDLIM2-219ENST00000616289 TEN1Q86WV5 123 aa5.41□□□□□ -1.54
PDLIM2-219ENST00000616289 FAM218AQ96MZ4 157 aa5.41□□□□□ -1.54
PDLIM2-219ENST00000616289 NDUFV3P56181 108 aaKnown RBP5.4□□□□□ -1.54
PDLIM2-219ENST00000616289 DSCR10P59022 87 aa5.4□□□□□ -1.54
PDLIM2-219ENST00000616289 SCGB1A1P11684 91 aa5.39□□□□□ -1.55
PDLIM2-219ENST00000616289 FCGBPQ9Y6R7 5405 aaPredicted RBP5.39□□□□□ -1.55
PDLIM2-219ENST00000616289 KRTAP16-1A8MUX0 517 aa5.37□□□□□ -1.55
PDLIM2-219ENST00000616289 MT2AP02795 61 aa5.37□□□□□ -1.55
PDLIM2-219ENST00000616289 RAB37Q96AX2 223 aa5.37□□□□□ -1.55
PDLIM2-219ENST00000616289 SIGMAR1Q99720 223 aa5.37□□□□□ -1.55
PDLIM2-219ENST00000616289 A0A0B4J2C4 111 aa5.36□□□□□ -1.55
PDLIM2-219ENST00000616289 H0YGX0 51 aa5.36□□□□□ -1.55
PDLIM2-219ENST00000616289 H3BMG7 143 aa5.36□□□□□ -1.55
PDLIM2-219ENST00000616289 SNCGO76070 127 aa5.36□□□□□ -1.55
PDLIM2-219ENST00000616289 GTF2H5Q6ZYL4 71 aa5.36□□□□□ -1.55
PDLIM2-219ENST00000616289 HIGD1BQ9P298 99 aa5.36□□□□□ -1.55
PDLIM2-219ENST00000616289 A0A1W2PNM2 257 aa5.35□□□□□ -1.55
PDLIM2-219ENST00000616289 TAX1BP3O14907 124 aa5.35□□□□□ -1.55
PDLIM2-219ENST00000616289 C2orf91Q6ZV80 131 aa5.35□□□□□ -1.55
PDLIM2-219ENST00000616289 MACF1Q9UPN3 7388 aaKnown RBP5.34□□□□□ -1.55
PDLIM2-219ENST00000616289 FAM236DA0A1B0GTK5 79 aa5.34□□□□□ -1.55
PDLIM2-219ENST00000616289 MT1FP04733 61 aa5.34□□□□□ -1.55
PDLIM2-219ENST00000616289 FAM236CP0DP71 79 aa5.34□□□□□ -1.55
PDLIM2-219ENST00000616289 FABP2P12104 132 aa5.34□□□□□ -1.55
PDLIM2-219ENST00000616289 A0A1B0GV72 72 aa5.33□□□□□ -1.56
PDLIM2-219ENST00000616289 LCE2BO14633 110 aa5.33□□□□□ -1.56
PDLIM2-219ENST00000616289 HSD52Q0P140 79 aa5.33□□□□□ -1.56
PDLIM2-219ENST00000616289 A0A1B0GX51 115 aa5.32□□□□□ -1.56
PDLIM2-219ENST00000616289 IGKV4-1P06312 121 aa5.32□□□□□ -1.56
PDLIM2-219ENST00000616289 HRES1P13985 223 aa5.32□□□□□ -1.56
PDLIM2-219ENST00000616289 LINC00313P59037 77 aa5.32□□□□□ -1.56
PDLIM2-219ENST00000616289 MPLKIPQ8TAP9 179 aa5.32□□□□□ -1.56
PDLIM2-219ENST00000616289 NOTCH2NLQ7Z3S9 236 aa5.31□□□□□ -1.56
PDLIM2-219ENST00000616289 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms