RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 RPL37P61927 97 aaKnown RBP5.64□□□□□ -1.51
TNFRSF9-204ENST00000615230 Q1T7F1 81 aa5.61□□□□□ -1.51
TNFRSF9-204ENST00000615230 WDR87Q6ZQQ6 2873 aa5.61□□□□□ -1.51
TNFRSF9-204ENST00000615230 Q8N9P0 234 aaPredicted RBP5.61□□□□□ -1.51
TNFRSF9-204ENST00000615230 KRTAP13-1Q8IUC0 172 aa5.61□□□□□ -1.51
TNFRSF9-204ENST00000615230 FLNBO75369 2602 aaKnown RBP5.6□□□□□ -1.51
TNFRSF9-204ENST00000615230 LCA10Q71F78 164 aa5.6□□□□□ -1.51
TNFRSF9-204ENST00000615230 LINC01558Q9Y6Z2 57 aa5.59□□□□□ -1.51
TNFRSF9-204ENST00000615230 GOLGB1Q14789 3259 aaKnown RBP5.58□□□□□ -1.52
TNFRSF9-204ENST00000615230 KMT2BQ9UMN6 2715 aaPredicted RBP5.58□□□□□ -1.52
TNFRSF9-204ENST00000615230 M0QZ58 72 aa5.55□□□□□ -1.52
TNFRSF9-204ENST00000615230 CHD9Q3L8U1 2897 aa5.54□□□□□ -1.52
TNFRSF9-204ENST00000615230 KRTAP13-2Q52LG2 175 aa5.54□□□□□ -1.52
TNFRSF9-204ENST00000615230 UTRNP46939 3433 aa5.52□□□□□ -1.53
TNFRSF9-204ENST00000615230 ADM2Q7Z4H4 148 aa5.51□□□□□ -1.53
TNFRSF9-204ENST00000615230 BAHCC1Q9P281 2608 aa5.5□□□□□ -1.53
TNFRSF9-204ENST00000615230 KRTAP29-1A8MX34 341 aaPredicted RBP5.5□□□□□ -1.53
TNFRSF9-204ENST00000615230 ZNF292O60281 2723 aa5.5□□□□□ -1.53
TNFRSF9-204ENST00000615230 LUZP6Q538Z0 58 aa5.49□□□□□ -1.53
TNFRSF9-204ENST00000615230 TRANK1O15050 2925 aa5.49□□□□□ -1.53
TNFRSF9-204ENST00000615230 SETD2Q9BYW2 2564 aaPredicted RBP5.48□□□□□ -1.53
TNFRSF9-204ENST00000615230 KRTAP11-1Q8IUC1 163 aa5.47□□□□□ -1.53
TNFRSF9-204ENST00000615230 TPRXLQ17RH7 258 aa5.47□□□□□ -1.53
TNFRSF9-204ENST00000615230 KRTAP7-1Q8IUC3 87 aa5.47□□□□□ -1.53
TNFRSF9-204ENST00000615230 KTN1-AS1Q86SY8 53 aa5.46□□□□□ -1.54
TNFRSF9-204ENST00000615230 CFAP46Q8IYW2 2715 aa5.45□□□□□ -1.54
TNFRSF9-204ENST00000615230 CENPFP49454 3210 aa5.45□□□□□ -1.54
TNFRSF9-204ENST00000615230 A8MUU9 505 aa5.45□□□□□ -1.54
TNFRSF9-204ENST00000615230 C20orf166-AS1Q96NR2 134 aa5.45□□□□□ -1.54
TNFRSF9-204ENST00000615230 CHD7Q9P2D1 2997 aa5.44□□□□□ -1.54
TNFRSF9-204ENST00000615230 A0A1B0GVY2 172 aa5.42□□□□□ -1.54
TNFRSF9-204ENST00000615230 NOTCH2NLQ7Z3S9 236 aa5.4□□□□□ -1.55
TNFRSF9-204ENST00000615230 ATRQ13535 2644 aa5.39□□□□□ -1.55
TNFRSF9-204ENST00000615230 IGSF10Q6WRI0 2623 aa5.39□□□□□ -1.55
TNFRSF9-204ENST00000615230 UNC79Q9P2D8 2635 aa5.39□□□□□ -1.55
TNFRSF9-204ENST00000615230 ROMO1P60602 79 aa5.38□□□□□ -1.55
TNFRSF9-204ENST00000615230 MAST4O15021 2626 aa5.38□□□□□ -1.55
TNFRSF9-204ENST00000615230 MGAM2Q2M2H8 2515 aa5.36□□□□□ -1.55
TNFRSF9-204ENST00000615230 KRTAP1-4P0C5Y4 121 aa5.36□□□□□ -1.55
TNFRSF9-204ENST00000615230 XP32Q5T750 250 aa5.34□□□□□ -1.55
TNFRSF9-204ENST00000615230 HTTP42858 3142 aa5.31□□□□□ -1.56
TNFRSF9-204ENST00000615230 PCNTO95613 3336 aa5.31□□□□□ -1.56
TNFRSF9-204ENST00000615230 AKAP13Q12802 2813 aa5.3□□□□□ -1.56
TNFRSF9-204ENST00000615230 DNAH12Q6ZR08 3092 aa5.29□□□□□ -1.56
TNFRSF9-204ENST00000615230 BPTFQ12830 3046 aa5.28□□□□□ -1.56
TNFRSF9-204ENST00000615230 Q5VV11 94 aa5.27□□□□□ -1.57
TNFRSF9-204ENST00000615230 TEP1Q99973 2627 aaKnown RBP5.25□□□□□ -1.57
TNFRSF9-204ENST00000615230 KRTAP13-3Q3SY46 172 aa5.24□□□□□ -1.57
TNFRSF9-204ENST00000615230 KRTAP10-8P60410 259 aa5.23□□□□□ -1.57
TNFRSF9-204ENST00000615230 SRCAPQ6ZRS2 3230 aa5.22□□□□□ -1.57
TNFRSF9-204ENST00000615230 PRO2289Q9P1D8 64 aa5.22□□□□□ -1.57
TNFRSF9-204ENST00000615230 TNP1P09430 55 aa5.2□□□□□ -1.58
TNFRSF9-204ENST00000615230 ITPR2Q14571 2701 aa5.2□□□□□ -1.58
TNFRSF9-204ENST00000615230 SPATA8Q6RVD6 105 aa5.19□□□□□ -1.58
TNFRSF9-204ENST00000615230 SETXQ7Z333 2677 aaKnown RBP5.15□□□□□ -1.58
TNFRSF9-204ENST00000615230 COL6A5A8TX70 2615 aa5.14□□□□□ -1.59
TNFRSF9-204ENST00000615230 TNRC18O15417 2968 aaPredicted RBP5.12□□□□□ -1.59
TNFRSF9-204ENST00000615230 GCN1Q92616 2671 aaKnown RBP5.12□□□□□ -1.59
TNFRSF9-204ENST00000615230 WDFY3Q8IZQ1 3526 aa5.12□□□□□ -1.59
TNFRSF9-204ENST00000615230 UBR5O95071 2799 aaPredicted RBP5.12□□□□□ -1.59
TNFRSF9-204ENST00000615230 KRTAP10-10P60014 251 aa5.12□□□□□ -1.59
TNFRSF9-204ENST00000615230 NSD1Q96L73 2696 aaPredicted RBP5.1□□□□□ -1.59
TNFRSF9-204ENST00000615230 A0A0A0MQY5 61 aa5.1□□□□□ -1.59
TNFRSF9-204ENST00000615230 C5orf42Q9H799 3197 aa5.1□□□□□ -1.59
TNFRSF9-204ENST00000615230 PP632Q6XCG6 107 aa5.09□□□□□ -1.59
TNFRSF9-204ENST00000615230 TEX15Q9BXT5 2789 aa5.09□□□□□ -1.6
TNFRSF9-204ENST00000615230 LAMA3Q16787 3333 aa5.08□□□□□ -1.6
TNFRSF9-204ENST00000615230 KRTAP16-1A8MUX0 517 aa5.08□□□□□ -1.6
TNFRSF9-204ENST00000615230 CYSTM1Q9H1C7 97 aa5.08□□□□□ -1.6
TNFRSF9-204ENST00000615230 CEP350Q5VT06 3117 aa5.05□□□□□ -1.6
TNFRSF9-204ENST00000615230 ZFHX3Q15911 3703 aa5.05□□□□□ -1.6
TNFRSF9-204ENST00000615230 VCANP13611 3396 aa5.04□□□□□ -1.6
TNFRSF9-204ENST00000615230 BRCA2P51587 3418 aa5.03□□□□□ -1.6
TNFRSF9-204ENST00000615230 HIVEP1P15822 2718 aa5.03□□□□□ -1.6
TNFRSF9-204ENST00000615230 MGAQ8IWI9 3026 aa5.03□□□□□ -1.6
TNFRSF9-204ENST00000615230 MAP1AP78559 2803 aaPredicted RBP5.02□□□□□ -1.61
TNFRSF9-204ENST00000615230 STAB1Q9NY15 2570 aa5.01□□□□□ -1.61
TNFRSF9-204ENST00000615230 CDH23Q9H251 3354 aa5.01□□□□□ -1.61
TNFRSF9-204ENST00000615230 CHD6Q8TD26 2715 aa4.98□□□□□ -1.61
TNFRSF9-204ENST00000615230 KRTAP25-1Q3LHN0 102 aa4.97□□□□□ -1.61
TNFRSF9-204ENST00000615230 MYO15AQ9UKN7 3530 aa4.97□□□□□ -1.61
TNFRSF9-204ENST00000615230 A8MU10 97 aa4.97□□□□□ -1.61
TNFRSF9-204ENST00000615230 LAMA2P24043 3122 aaKnown RBP4.95□□□□□ -1.62
TNFRSF9-204ENST00000615230 PRAC1Q96KF2 57 aa4.94□□□□□ -1.62
TNFRSF9-204ENST00000615230 PRRC2CQ9Y520 2896 aaKnown RBP4.94□□□□□ -1.62
TNFRSF9-204ENST00000615230 CENPEQ02224 2701 aa4.94□□□□□ -1.62
TNFRSF9-204ENST00000615230 DSPP15924 2871 aaKnown RBP4.94□□□□□ -1.62
TNFRSF9-204ENST00000615230 APCP25054 2843 aa4.93□□□□□ -1.62
TNFRSF9-204ENST00000615230 ALMS1Q8TCU4 4167 aa4.92□□□□□ -1.62
TNFRSF9-204ENST00000615230 UNC80Q8N2C7 3258 aa4.92□□□□□ -1.62
TNFRSF9-204ENST00000615230 TENM4Q6N022 2769 aa4.92□□□□□ -1.62
TNFRSF9-204ENST00000615230 XIRP2A4UGR9 3374 aa4.91□□□□□ -1.62
TNFRSF9-204ENST00000615230 UTP20O75691 2785 aaKnown RBP4.91□□□□□ -1.62
TNFRSF9-204ENST00000615230 H0YAA0 97 aa4.91□□□□□ -1.62
TNFRSF9-204ENST00000615230 DNAH14Q0VDD8 3507 aa4.9□□□□□ -1.63
TNFRSF9-204ENST00000615230 NBEAL1Q6ZS30 2694 aa4.89□□□□□ -1.63
TNFRSF9-204ENST00000615230 RANBP2P49792 3224 aaKnown RBP4.86□□□□□ -1.63
TNFRSF9-204ENST00000615230 NOTCH1P46531 2555 aa4.85□□□□□ -1.63
TNFRSF9-204ENST00000615230 EYSQ5T1H1 3165 aa4.84□□□□□ -1.64
TNFRSF9-204ENST00000615230 ITPR1Q14643 2758 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms