RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 TRANK1O15050 2925 aa5.56□□□□□ -1.52
TTC28-208ENST00000612946 A0A1W2PPR1 153 aa5.56□□□□□ -1.52
TTC28-208ENST00000612946 SEC61BP60468 96 aaKnown RBP5.56□□□□□ -1.52
TTC28-208ENST00000612946 GIG44P09565 113 aaPredicted RBP5.56□□□□□ -1.52
TTC28-208ENST00000612946 C19orf73Q9NVV2 129 aa5.55□□□□□ -1.52
TTC28-208ENST00000612946 KRTAP10-9P60411 292 aa5.55□□□□□ -1.52
TTC28-208ENST00000612946 NSD1Q96L73 2696 aaPredicted RBP5.54□□□□□ -1.52
TTC28-208ENST00000612946 A0A0D9SG42 100 aa5.54□□□□□ -1.52
TTC28-208ENST00000612946 SPRR1AP35321 89 aa5.53□□□□□ -1.52
TTC28-208ENST00000612946 LCE6AA0A183 80 aa5.53□□□□□ -1.52
TTC28-208ENST00000612946 SPRR1BP22528 89 aa5.53□□□□□ -1.52
TTC28-208ENST00000612946 APCP25054 2843 aa5.53□□□□□ -1.52
TTC28-208ENST00000612946 LINC00472Q9H8W2 130 aa5.52□□□□□ -1.53
TTC28-208ENST00000612946 ZNF575Q86XF7 245 aa5.52□□□□□ -1.53
TTC28-208ENST00000612946 RPL37P61927 97 aaKnown RBP5.52□□□□□ -1.53
TTC28-208ENST00000612946 Q8N1X5 172 aa5.51□□□□□ -1.53
TTC28-208ENST00000612946 CEP350Q5VT06 3117 aa5.49□□□□□ -1.53
TTC28-208ENST00000612946 IGSF10Q6WRI0 2623 aa5.49□□□□□ -1.53
TTC28-208ENST00000612946 KRTAP25-1Q3LHN0 102 aa5.48□□□□□ -1.53
TTC28-208ENST00000612946 Q5W150 140 aa5.47□□□□□ -1.53
TTC28-208ENST00000612946 H1FX-AS1Q4G0G2 97 aa5.46□□□□□ -1.54
TTC28-208ENST00000612946 PSORS1C2Q9UIG4 136 aa5.45□□□□□ -1.54
TTC28-208ENST00000612946 UBR5O95071 2799 aaPredicted RBP5.44□□□□□ -1.54
TTC28-208ENST00000612946 A0A0C4DFX4 3053 aa5.43□□□□□ -1.54
TTC28-208ENST00000612946 WWC2-AS2Q96NR7 200 aa5.43□□□□□ -1.54
TTC28-208ENST00000612946 GOLGB1Q14789 3259 aaKnown RBP5.42□□□□□ -1.54
TTC28-208ENST00000612946 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.41□□□□□ -1.54
TTC28-208ENST00000612946 A0A0G2JQZ4 141 aa5.4□□□□□ -1.54
TTC28-208ENST00000612946 A0A1W2PNN7 141 aa5.4□□□□□ -1.54
TTC28-208ENST00000612946 S4R3F8 94 aa5.4□□□□□ -1.54
TTC28-208ENST00000612946 NBEAL2Q6ZNJ1 2754 aa5.4□□□□□ -1.54
TTC28-208ENST00000612946 KRTAP29-1A8MX34 341 aaPredicted RBP5.4□□□□□ -1.55
TTC28-208ENST00000612946 A0A087WTM6 91 aa5.4□□□□□ -1.55
TTC28-208ENST00000612946 DSPP15924 2871 aaKnown RBP5.4□□□□□ -1.55
TTC28-208ENST00000612946 NOTCH2NLQ7Z3S9 236 aa5.38□□□□□ -1.55
TTC28-208ENST00000612946 C9orf92A6NGG3 77 aa5.36□□□□□ -1.55
TTC28-208ENST00000612946 ANAPC11Q9NYG5 84 aa5.34□□□□□ -1.55
TTC28-208ENST00000612946 FLNCQ14315 2725 aa5.34□□□□□ -1.55
TTC28-208ENST00000612946 PCNTO95613 3336 aa5.34□□□□□ -1.55
TTC28-208ENST00000612946 KRTAP24-1Q3LI83 254 aa5.34□□□□□ -1.55
TTC28-208ENST00000612946 C5orf42Q9H799 3197 aa5.33□□□□□ -1.56
TTC28-208ENST00000612946 KRTAP26-1Q6PEX3 210 aa5.33□□□□□ -1.56
TTC28-208ENST00000612946 SRCAPQ6ZRS2 3230 aa5.3□□□□□ -1.56
TTC28-208ENST00000612946 CHD7Q9P2D1 2997 aa5.3□□□□□ -1.56
TTC28-208ENST00000612946 CHD9Q3L8U1 2897 aa5.29□□□□□ -1.56
TTC28-208ENST00000612946 NDUFAF8A1L188 74 aa5.29□□□□□ -1.56
TTC28-208ENST00000612946 PANO1I0J062 215 aa5.29□□□□□ -1.56
TTC28-208ENST00000612946 PLAC8Q9NZF1 115 aa5.29□□□□□ -1.56
TTC28-208ENST00000612946 KRTAP4-16G5E9R7 235 aaPredicted RBP5.28□□□□□ -1.56
TTC28-208ENST00000612946 Q8NDZ9 215 aa5.28□□□□□ -1.56
TTC28-208ENST00000612946 R4GN34 69 aa5.28□□□□□ -1.56
TTC28-208ENST00000612946 SMR3BP02814 79 aaPredicted RBP5.27□□□□□ -1.57
TTC28-208ENST00000612946 M0QZ58 72 aa5.26□□□□□ -1.57
TTC28-208ENST00000612946 CFAP54Q96N23 3096 aa5.25□□□□□ -1.57
TTC28-208ENST00000612946 LRBAP50851 2863 aa5.25□□□□□ -1.57
TTC28-208ENST00000612946 Q6ZSA8 131 aa5.25□□□□□ -1.57
TTC28-208ENST00000612946 K7EIL1 84 aa5.24□□□□□ -1.57
TTC28-208ENST00000612946 M0R2T5 61 aa5.24□□□□□ -1.57
TTC28-208ENST00000612946 MGAQ8IWI9 3026 aa5.24□□□□□ -1.57
TTC28-208ENST00000612946 HIVEP1P15822 2718 aa5.23□□□□□ -1.57
TTC28-208ENST00000612946 KRTAP10-11P60412 298 aa5.22□□□□□ -1.57
TTC28-208ENST00000612946 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
TTC28-208ENST00000612946 TRIOO75962 3097 aa5.21□□□□□ -1.58
TTC28-208ENST00000612946 CASC10Q5T4H9 136 aa5.21□□□□□ -1.58
TTC28-208ENST00000612946 RPS29P62273 56 aaKnown RBP5.21□□□□□ -1.58
TTC28-208ENST00000612946 C20orf166-AS1Q96NR2 134 aa5.21□□□□□ -1.58
TTC28-208ENST00000612946 TENM1Q9UKZ4 2725 aa5.2□□□□□ -1.58
TTC28-208ENST00000612946 FRYLO94915 3013 aa5.2□□□□□ -1.58
TTC28-208ENST00000612946 LAMA2P24043 3122 aaKnown RBP5.19□□□□□ -1.58
TTC28-208ENST00000612946 NIPBLQ6KC79 2804 aaeCLIP5.19□□□□□ -1.58
TTC28-208ENST00000612946 PLAC4Q8WY50 150 aa5.19□□□□□ -1.58
TTC28-208ENST00000612946 NF1P21359 2839 aa5.18□□□□□ -1.58
TTC28-208ENST00000612946 A8MUU9 505 aa5.18□□□□□ -1.58
TTC28-208ENST00000612946 KRTAP11-1Q8IUC1 163 aa5.17□□□□□ -1.58
TTC28-208ENST00000612946 TENM3Q9P273 2699 aa5.16□□□□□ -1.58
TTC28-208ENST00000612946 KALRNO60229 2985 aa5.15□□□□□ -1.59
TTC28-208ENST00000612946 TACC2O95359 2948 aa5.15□□□□□ -1.59
TTC28-208ENST00000612946 NBEAQ8NFP9 2946 aa5.14□□□□□ -1.59
TTC28-208ENST00000612946 CELSR2Q9HCU4 2923 aa5.14□□□□□ -1.59
TTC28-208ENST00000612946 ADM2Q7Z4H4 148 aa5.13□□□□□ -1.59
TTC28-208ENST00000612946 VPS13AQ96RL7 3174 aa5.11□□□□□ -1.59
TTC28-208ENST00000612946 FRYQ5TBA9 3013 aa5.09□□□□□ -1.6
TTC28-208ENST00000612946 UTRNP46939 3433 aa5.07□□□□□ -1.6
TTC28-208ENST00000612946 TGP01266 2768 aa5.06□□□□□ -1.6
TTC28-208ENST00000612946 KRTAP10-3P60369 221 aa5.04□□□□□ -1.6
TTC28-208ENST00000612946 A8MU10 97 aa5.03□□□□□ -1.6
TTC28-208ENST00000612946 RANBP2P49792 3224 aaKnown RBP5.03□□□□□ -1.6
TTC28-208ENST00000612946 ZANQ9Y493 2812 aa5.03□□□□□ -1.6
TTC28-208ENST00000612946 KRTAP1-3Q8IUG1 177 aa5.03□□□□□ -1.6
TTC28-208ENST00000612946 HTTP42858 3142 aa5.01□□□□□ -1.61
TTC28-208ENST00000612946 KRTAP1-1Q07627 177 aa4.99□□□□□ -1.61
TTC28-208ENST00000612946 ASH1LQ9NR48 2969 aaKnown RBP4.99□□□□□ -1.61
TTC28-208ENST00000612946 P0C880 135 aa4.99□□□□□ -1.61
TTC28-208ENST00000612946 TNP1P09430 55 aa4.98□□□□□ -1.61
TTC28-208ENST00000612946 TNRC18O15417 2968 aaPredicted RBP4.98□□□□□ -1.61
TTC28-208ENST00000612946 ZZEF1O43149 2961 aa4.97□□□□□ -1.61
TTC28-208ENST00000612946 TENM4Q6N022 2769 aa4.96□□□□□ -1.62
TTC28-208ENST00000612946 PDZD2O15018 2839 aa4.95□□□□□ -1.62
TTC28-208ENST00000612946 HRNRQ86YZ3 2850 aaPredicted RBP4.94□□□□□ -1.62
TTC28-208ENST00000612946 KRTAP13-1Q8IUC0 172 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms