RNA–Protein interactions for RNA: ENST00000611835.4

GTF2IRD2B-204, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best)

Gene GTF2IRD2B, Length 3,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-204ENST00000611835 IGLV1-50A0A075B6I6 118 aa4.11□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 CHKB-CPT1BH3BT56 60 aa4.11□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 J3QL48 77 aa4.11□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 NDUFB1O75438 58 aa4.11□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 LINC00313P59037 77 aa4.1□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 LINC01556Q5JQF7 62 aa4.1□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 CASC10Q5T4H9 136 aa4.1□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 COL6A5A8TX70 2615 aa4.1□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 A0A1B0GW54 56 aa4.1□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 REG3GQ6UW15 175 aa4.1□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 B9D2Q9BPU9 175 aa4.1□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 ANK3Q12955 4377 aaKnown RBP4.09□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 TNP2Q05952 138 aa4.09□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 TENM3Q9P273 2699 aa4.09□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 UBE2AP49459 152 aa4.09□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 Q1T7F1 81 aa4.09□□□□□ -1.75
GTF2IRD2B-204ENST00000611835 TRRAPQ9Y4A5 3859 aa4.09□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 H0Y9P7 68 aa4.08□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 IGFL1Q6UW32 110 aa4.08□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 SPRR4Q96PI1 79 aa4.08□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 STAB1Q9NY15 2570 aa4.08□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 NBEAL1Q6ZS30 2694 aa4.08□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 CASC2Q6XLA1 102 aa4.08□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 PRR15LQ9BU68 103 aa4.08□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 H3BNG1 76 aa4.08□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 NSD1Q96L73 2696 aaPredicted RBP4.07□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 C7orf65Q6ZTY9 151 aa4.07□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 ZCCHC13Q8WW36 166 aaKnown RBP4.07□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 OTOGQ6ZRI0 2925 aa4.06□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 A8MU10 97 aa4.06□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 A6NED7 52 aa4.06□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 KRTAP4-16G5E9R7 235 aaPredicted RBP4.06□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 PCOTHQ58A44 107 aa4.06□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 LCE6AA0A183 80 aa4.05□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 SPRR1AP35321 89 aa4.05□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 CYP4F30PQ9H0H9 118 aa4.05□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 TLX1NBP0CAT3 122 aa4.04□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 DNAH10OSP0CZ25 163 aa4.04□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 KRTAP7-1Q8IUC3 87 aa4.04□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 LINC01554Q52M75 96 aa4.04□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 PLA2G2DQ9UNK4 145 aa4.04□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 A6NN06 94 aa4.03□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 KRTAP10-11P60412 298 aa4.03□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 ATP11AUNQ6ZP68 121 aa4.03□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 SRRM2Q9UQ35 2752 aaKnown RBP4.03□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 MGAM2Q2M2H8 2515 aa4.03□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 FBN1P35555 2871 aaKnown RBP4.03□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 LIMD2Q9BT23 127 aa4.03□□□□□ -1.76
GTF2IRD2B-204ENST00000611835 Q5VV11 94 aa4.02□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 IGHV6-1A0A0B4J1U7 121 aa4.02□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 IGLV5-37A0A075B6J1 123 aa4.01□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 CHTF8P0CG12 524 aa4.01□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 SPAG11AQ6PDA7 123 aa4.01□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 Q8N9P0 234 aaPredicted RBP4.01□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 ZNF706Q9Y5V0 76 aaPredicted RBP4.01□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 IGLV9-49A0A0B4J1Y8 123 aa4□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 A8MWP4 228 aa4□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 COA5Q86WW8 74 aa4□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 CNBPP62633 177 aaKnown RBP4□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 NOTCH2NLQ7Z3S9 236 aa4□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 UBE2DNLQ8IWF7 75 aa4□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 C16orf90A8MZG2 172 aa3.99□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 CDK2AP2O75956 126 aa3.99□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 KRTAP29-1A8MX34 341 aaPredicted RBP3.98□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 H3BPC8 53 aa3.98□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 SPANXA2-OT1Q8N9U9 137 aa3.98□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 KRTAP21-3Q3LHN1 58 aa3.97□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 STAB2Q8WWQ8 2551 aa3.97□□□□□ -1.77
GTF2IRD2B-204ENST00000611835 LINC00472Q9H8W2 130 aa3.96□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 SEC61BP60468 96 aaKnown RBP3.95□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 KRTAP11-1Q8IUC1 163 aa3.95□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 CMYA5Q8N3K9 4069 aa3.95□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 IGLV8-61A0A075B6I0 122 aa3.94□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 LOC101927531A0A1B0GV80 90 aa3.94□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 SPINK6Q6UWN8 80 aa3.94□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 CSMD3Q7Z407 3707 aa3.94□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 MMP24-AS1A0A0U1RRL7 71 aa3.94□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 C9orf163Q8N9P6 203 aa3.94□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 COL7A1Q02388 2944 aa3.94□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 IGLV7-46A0A075B6I9 117 aa3.93□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 KRTAP1-5Q9BYS1 174 aa3.93□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 TENM2Q9NT68 2774 aa3.92□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 TP53AIP1Q9HCN2 124 aa3.91□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 C8orf17Q9NRJ1 99 aa3.91□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 C14orf177Q52M58 125 aa3.91□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 ANAPC11Q9NYG5 84 aa3.91□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 CDC42SE1Q9NRR8 79 aa3.91□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 SPINK7P58062 85 aa3.9□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 MOBPQ13875 183 aa3.9□□□□□ -1.78
GTF2IRD2B-204ENST00000611835 ANK2Q01484 3957 aa3.9□□□□□ -1.79
GTF2IRD2B-204ENST00000611835 KRTAP24-1Q3LI83 254 aa3.9□□□□□ -1.79
GTF2IRD2B-204ENST00000611835 HRES1P13985 223 aa3.89□□□□□ -1.79
GTF2IRD2B-204ENST00000611835 SPRR1BP22528 89 aa3.89□□□□□ -1.79
GTF2IRD2B-204ENST00000611835 ASB16-AS1Q495Z4 193 aa3.89□□□□□ -1.79
GTF2IRD2B-204ENST00000611835 A0A087X002 238 aa3.88□□□□□ -1.79
GTF2IRD2B-204ENST00000611835 RETNLBQ9BQ08 111 aa3.88□□□□□ -1.79
GTF2IRD2B-204ENST00000611835 MRPL34Q9BQ48 92 aaKnown RBP3.88□□□□□ -1.79
GTF2IRD2B-204ENST00000611835 A0A1B0GVX0 72 aa3.88□□□□□ -1.79
GTF2IRD2B-204ENST00000611835 K7EIL1 84 aa3.88□□□□□ -1.79
GTF2IRD2B-204ENST00000611835 LINC01558Q9Y6Z2 57 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms