RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.95□□□□□ -1.62
SNCA-212ENST00000611107 MUC2Q02817 5179 aa4.94□□□□□ -1.62
SNCA-212ENST00000611107 LAMTOR3Q9UHA4 124 aa4.94□□□□□ -1.62
SNCA-212ENST00000611107 A0A1B0GX51 115 aa4.93□□□□□ -1.62
SNCA-212ENST00000611107 PSMB2P49721 201 aa4.93□□□□□ -1.62
SNCA-212ENST00000611107 SSBP3-AS1Q7Z2R9 100 aa4.93□□□□□ -1.62
SNCA-212ENST00000611107 BATFQ16520 125 aa4.92□□□□□ -1.62
SNCA-212ENST00000611107 NAA38Q9BRA0 125 aaKnown RBP4.92□□□□□ -1.62
SNCA-212ENST00000611107 A0A0G2JQZ4 141 aa4.91□□□□□ -1.62
SNCA-212ENST00000611107 COX6CP09669 75 aa4.91□□□□□ -1.62
SNCA-212ENST00000611107 SPAG11AQ6PDA7 123 aa4.91□□□□□ -1.62
SNCA-212ENST00000611107 PPDPFLQ8WWR9 84 aa4.91□□□□□ -1.62
SNCA-212ENST00000611107 IGLV8-61A0A075B6I0 122 aa4.9□□□□□ -1.63
SNCA-212ENST00000611107 LST1O00453 97 aa4.9□□□□□ -1.63
SNCA-212ENST00000611107 F8WEM9 126 aa4.89□□□□□ -1.63
SNCA-212ENST00000611107 SPINK1P00995 79 aa4.89□□□□□ -1.63
SNCA-212ENST00000611107 RPS29P62273 56 aaKnown RBP4.89□□□□□ -1.63
SNCA-212ENST00000611107 OCIAD2Q56VL3 154 aa4.89□□□□□ -1.63
SNCA-212ENST00000611107 IGLV7-46A0A075B6I9 117 aa4.88□□□□□ -1.63
SNCA-212ENST00000611107 H3BUT2 72 aa4.88□□□□□ -1.63
SNCA-212ENST00000611107 SNCGO76070 127 aa4.88□□□□□ -1.63
SNCA-212ENST00000611107 DNAL4O96015 105 aa4.88□□□□□ -1.63
SNCA-212ENST00000611107 TRACP01848 142 aa4.88□□□□□ -1.63
SNCA-212ENST00000611107 C4orf48Q5BLP8 95 aa4.88□□□□□ -1.63
SNCA-212ENST00000611107 HRCT1Q6UXD1 115 aa4.88□□□□□ -1.63
SNCA-212ENST00000611107 SNHG12Q9BXW3 62 aa4.88□□□□□ -1.63
SNCA-212ENST00000611107 FAT4Q6V0I7 4981 aa4.87□□□□□ -1.63
SNCA-212ENST00000611107 TAX1BP3O14907 124 aa4.87□□□□□ -1.63
SNCA-212ENST00000611107 TCL1BO95988 128 aa4.87□□□□□ -1.63
SNCA-212ENST00000611107 SCGB1C2P0DMR2 95 aa4.87□□□□□ -1.63
SNCA-212ENST00000611107 IGFL1Q6UW32 110 aa4.87□□□□□ -1.63
SNCA-212ENST00000611107 ORMDL1Q9P0S3 153 aa4.87□□□□□ -1.63
SNCA-212ENST00000611107 NDUFV3P56181 108 aaKnown RBP4.86□□□□□ -1.63
SNCA-212ENST00000611107 CD164Q04900 197 aa4.86□□□□□ -1.63
SNCA-212ENST00000611107 Q6JHZ5 121 aa4.86□□□□□ -1.63
SNCA-212ENST00000611107 FABP2P12104 132 aa4.85□□□□□ -1.63
SNCA-212ENST00000611107 KRTAP4-1Q9BYQ7 146 aa4.85□□□□□ -1.63
SNCA-212ENST00000611107 C9orf118A6NHY6 69 aa4.84□□□□□ -1.63
SNCA-212ENST00000611107 TPRXLQ17RH7 258 aa4.84□□□□□ -1.63
SNCA-212ENST00000611107 KRTAP13-3Q3SY46 172 aa4.84□□□□□ -1.63
SNCA-212ENST00000611107 LIMD2Q9BT23 127 aa4.84□□□□□ -1.63
SNCA-212ENST00000611107 A0A1B0GV72 72 aa4.83□□□□□ -1.64
SNCA-212ENST00000611107 A0A1W2PPM0 123 aa4.83□□□□□ -1.64
SNCA-212ENST00000611107 PCP4L1A6NKN8 68 aa4.83□□□□□ -1.64
SNCA-212ENST00000611107 GHRHP01286 108 aa4.83□□□□□ -1.64
SNCA-212ENST00000611107 ATXN8Q156A1 80 aa4.83□□□□□ -1.64
SNCA-212ENST00000611107 LYRM7Q5U5X0 104 aa4.83□□□□□ -1.64
SNCA-212ENST00000611107 TRBV7-7A0A0K0K1E9 115 aa4.82□□□□□ -1.64
SNCA-212ENST00000611107 H3BMG7 143 aa4.82□□□□□ -1.64
SNCA-212ENST00000611107 TMEM256-PLSCR3K7ERE1 68 aa4.82□□□□□ -1.64
SNCA-212ENST00000611107 Q5XG85 94 aa4.82□□□□□ -1.64
SNCA-212ENST00000611107 FP248Q71RG6 208 aaPredicted RBP4.82□□□□□ -1.64
SNCA-212ENST00000611107 H3BQ85 93 aa4.81□□□□□ -1.64
SNCA-212ENST00000611107 UBE2V1Q13404 147 aa4.81□□□□□ -1.64
SNCA-212ENST00000611107 TRBV20-1A0A075B6N2 111 aa4.8□□□□□ -1.64
SNCA-212ENST00000611107 COL5A1-AS1Q5SY13 56 aa4.8□□□□□ -1.64
SNCA-212ENST00000611107 Q6Q795 121 aa4.8□□□□□ -1.64
SNCA-212ENST00000611107 CDIP1Q9H305 208 aa4.8□□□□□ -1.64
SNCA-212ENST00000611107 A0A1W2PNM2 257 aa4.79□□□□□ -1.64
SNCA-212ENST00000611107 BAALC-AS2P0C853 105 aa4.79□□□□□ -1.64
SNCA-212ENST00000611107 LCE2AQ5TA79 106 aaPredicted RBP4.79□□□□□ -1.64
SNCA-212ENST00000611107 ANKRD29Q8N6D5 301 aa4.79□□□□□ -1.64
SNCA-212ENST00000611107 TRBV7-4A0A0J9YYF1 115 aa4.78□□□□□ -1.64
SNCA-212ENST00000611107 C9JAW5 83 aa4.78□□□□□ -1.64
SNCA-212ENST00000611107 C1orf195Q5TG92 126 aa4.78□□□□□ -1.64
SNCA-212ENST00000611107 TEN1Q86WV5 123 aa4.78□□□□□ -1.64
SNCA-212ENST00000611107 MTURNQ8N3F0 131 aa4.78□□□□□ -1.64
SNCA-212ENST00000611107 ASB16-AS1Q495Z4 193 aa4.77□□□□□ -1.65
SNCA-212ENST00000611107 SPCS1Q9Y6A9 102 aa4.77□□□□□ -1.65
SNCA-212ENST00000611107 A0A087WSZ3 146 aa4.76□□□□□ -1.65
SNCA-212ENST00000611107 H3BT86 120 aa4.75□□□□□ -1.65
SNCA-212ENST00000611107 RBM3P98179 157 aaKnown RBP4.75□□□□□ -1.65
SNCA-212ENST00000611107 XP32Q5T750 250 aa4.75□□□□□ -1.65
SNCA-212ENST00000611107 K7EP34 96 aa4.74□□□□□ -1.65
SNCA-212ENST00000611107 CCKP06307 115 aa4.74□□□□□ -1.65
SNCA-212ENST00000611107 OBSCN-AS1Q96MR7 158 aa4.74□□□□□ -1.65
SNCA-212ENST00000611107 Q96NJ1 140 aa4.74□□□□□ -1.65
SNCA-212ENST00000611107 SS18L2Q9UHA2 77 aa4.74□□□□□ -1.65
SNCA-212ENST00000611107 Q6ZQT0 140 aa4.73□□□□□ -1.65
SNCA-212ENST00000611107 DSCR8Q96T75 97 aa4.73□□□□□ -1.65
SNCA-212ENST00000611107 LOC110117498A0A087WWA1 95 aa4.72□□□□□ -1.65
SNCA-212ENST00000611107 JMJD7-PLA2G4BH0Y9G9 81 aa4.72□□□□□ -1.65
SNCA-212ENST00000611107 SMCPP49901 116 aaPredicted RBP4.72□□□□□ -1.65
SNCA-212ENST00000611107 VPS25Q9BRG1 176 aa4.72□□□□□ -1.65
SNCA-212ENST00000611107 C14orf132Q9NPU4 83 aa4.72□□□□□ -1.65
SNCA-212ENST00000611107 PRO0461Q9UI25 63 aa4.72□□□□□ -1.65
SNCA-212ENST00000611107 C9orf92A6NGG3 77 aa4.71□□□□□ -1.66
SNCA-212ENST00000611107 KRTAP19-2Q3LHN2 52 aa4.7□□□□□ -1.66
SNCA-212ENST00000611107 LCE2CQ5TA81 110 aa4.69□□□□□ -1.66
SNCA-212ENST00000611107 PDE6GP18545 87 aa4.67□□□□□ -1.66
SNCA-212ENST00000611107 SIGMAR1Q99720 223 aa4.67□□□□□ -1.66
SNCA-212ENST00000611107 LINC00472Q9H8W2 130 aa4.67□□□□□ -1.66
SNCA-212ENST00000611107 PCOTHQ58A44 107 aa4.66□□□□□ -1.66
SNCA-212ENST00000611107 GTF2H5Q6ZYL4 71 aa4.66□□□□□ -1.66
SNCA-212ENST00000611107 DEFB116Q30KQ4 102 aa4.65□□□□□ -1.67
SNCA-212ENST00000611107 A0A1B0GW54 56 aa4.64□□□□□ -1.67
SNCA-212ENST00000611107 IGKV4-1P06312 121 aa4.64□□□□□ -1.67
SNCA-212ENST00000611107 SEC61BP60468 96 aaKnown RBP4.64□□□□□ -1.67
SNCA-212ENST00000611107 C21orf62-AS1Q17RA5 79 aa4.64□□□□□ -1.67
SNCA-212ENST00000611107 A0A0U1RQV1 116 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms