RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 VAMP3Q15836 100 aa7.29□□□□□ -1.24
SNX20-205ENST00000610485 LYRM7Q5U5X0 104 aa7.29□□□□□ -1.24
SNX20-205ENST00000610485 ST20-AS1Q8NBB2 130 aa7.29□□□□□ -1.24
SNX20-205ENST00000610485 SMIM11BQ8TCY0 68 aa7.29□□□□□ -1.24
SNX20-205ENST00000610485 TRIAP1O43715 76 aa7.28□□□□□ -1.24
SNX20-205ENST00000610485 A0A0U1RQV1 116 aa7.27□□□□□ -1.25
SNX20-205ENST00000610485 SPRR1BP22528 89 aa7.27□□□□□ -1.25
SNX20-205ENST00000610485 Q8N377 158 aa7.27□□□□□ -1.25
SNX20-205ENST00000610485 DHRS4-AS1Q9P1J3 65 aa7.27□□□□□ -1.25
SNX20-205ENST00000610485 ELOF1P60002 83 aaKnown RBP7.26□□□□□ -1.25
SNX20-205ENST00000610485 KRTAP13-3Q3SY46 172 aa7.26□□□□□ -1.25
SNX20-205ENST00000610485 C9orf153Q5TBE3 101 aa7.26□□□□□ -1.25
SNX20-205ENST00000610485 C6orf99Q4VX62 202 aa7.25□□□□□ -1.25
SNX20-205ENST00000610485 SPCS1Q9Y6A9 102 aa7.25□□□□□ -1.25
SNX20-205ENST00000610485 H0YGX0 51 aa7.24□□□□□ -1.25
SNX20-205ENST00000610485 COX7BP24311 80 aa7.24□□□□□ -1.25
SNX20-205ENST00000610485 GTF2H5Q6ZYL4 71 aa7.24□□□□□ -1.25
SNX20-205ENST00000610485 TRBV20-1A0A075B6N2 111 aa7.23□□□□□ -1.25
SNX20-205ENST00000610485 K7EP34 96 aa7.23□□□□□ -1.25
SNX20-205ENST00000610485 SLC25A20O43772 301 aa7.23□□□□□ -1.25
SNX20-205ENST00000610485 TRBV7-6A0A0J9YX20 115 aa7.22□□□□□ -1.25
SNX20-205ENST00000610485 TCL1BO95988 128 aa7.22□□□□□ -1.25
SNX20-205ENST00000610485 ATXN8Q156A1 80 aa7.22□□□□□ -1.25
SNX20-205ENST00000610485 CLEC2BQ92478 149 aa7.22□□□□□ -1.25
SNX20-205ENST00000610485 FAT4Q6V0I7 4981 aa7.21□□□□□ -1.26
SNX20-205ENST00000610485 LAMTOR3Q9UHA4 124 aa7.2□□□□□ -1.26
SNX20-205ENST00000610485 SNCGO76070 127 aa7.19□□□□□ -1.26
SNX20-205ENST00000610485 UBE2V1Q13404 147 aa7.19□□□□□ -1.26
SNX20-205ENST00000610485 H3BMG7 143 aa7.18□□□□□ -1.26
SNX20-205ENST00000610485 LST1O00453 97 aa7.18□□□□□ -1.26
SNX20-205ENST00000610485 ASB16-AS1Q495Z4 193 aa7.18□□□□□ -1.26
SNX20-205ENST00000610485 TEX49A0A1B0GTD5 131 aa7.17□□□□□ -1.26
SNX20-205ENST00000610485 FAM218AQ96MZ4 157 aa7.17□□□□□ -1.26
SNX20-205ENST00000610485 TRACP01848 142 aa7.16□□□□□ -1.26
SNX20-205ENST00000610485 LCE2AQ5TA79 106 aaPredicted RBP7.16□□□□□ -1.26
SNX20-205ENST00000610485 LINC00575Q6W349 94 aa7.16□□□□□ -1.26
SNX20-205ENST00000610485 DEFB105AQ8NG35 78 aa7.16□□□□□ -1.26
SNX20-205ENST00000610485 LIMD2Q9BT23 127 aa7.16□□□□□ -1.26
SNX20-205ENST00000610485 IGLV5-48A0A075B6I7 105 aa7.15□□□□□ -1.26
SNX20-205ENST00000610485 A0A1B0GX51 115 aa7.15□□□□□ -1.26
SNX20-205ENST00000610485 hADV29S1A0JD25 119 aa7.15□□□□□ -1.26
SNX20-205ENST00000610485 DNAL4O96015 105 aa7.15□□□□□ -1.26
SNX20-205ENST00000610485 LINC01547P58512 204 aaPredicted RBP7.15□□□□□ -1.26
SNX20-205ENST00000610485 SMIM29Q86T20 159 aa7.15□□□□□ -1.26
SNX20-205ENST00000610485 C9JAW5 83 aa7.14□□□□□ -1.27
SNX20-205ENST00000610485 CD164Q04900 197 aa7.13□□□□□ -1.27
SNX20-205ENST00000610485 XP32Q5T750 250 aa7.13□□□□□ -1.27
SNX20-205ENST00000610485 HRCT1Q6UXD1 115 aa7.13□□□□□ -1.27
SNX20-205ENST00000610485 SEC61BP60468 96 aaKnown RBP7.12□□□□□ -1.27
SNX20-205ENST00000610485 F8W1H4 67 aa7.11□□□□□ -1.27
SNX20-205ENST00000610485 MTURNQ8N3F0 131 aa7.11□□□□□ -1.27
SNX20-205ENST00000610485 ORMDL1Q9P0S3 153 aa7.1□□□□□ -1.27
SNX20-205ENST00000610485 BAALC-AS2P0C853 105 aa7.09□□□□□ -1.27
SNX20-205ENST00000610485 Q5XG85 94 aa7.09□□□□□ -1.27
SNX20-205ENST00000610485 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.09□□□□□ -1.27
SNX20-205ENST00000610485 KRTAP4-1Q9BYQ7 146 aa7.09□□□□□ -1.27
SNX20-205ENST00000610485 PRO0461Q9UI25 63 aa7.09□□□□□ -1.27
SNX20-205ENST00000610485 Q6ZQY7 126 aa7.08□□□□□ -1.28
SNX20-205ENST00000610485 ANKRD29Q8N6D5 301 aa7.08□□□□□ -1.28
SNX20-205ENST00000610485 H3BT86 120 aa7.07□□□□□ -1.28
SNX20-205ENST00000610485 GHRHP01286 108 aa7.07□□□□□ -1.28
SNX20-205ENST00000610485 SMCPP49901 116 aaPredicted RBP7.07□□□□□ -1.28
SNX20-205ENST00000610485 OCIAD2Q56VL3 154 aa7.07□□□□□ -1.28
SNX20-205ENST00000610485 H3BQ85 93 aa7.06□□□□□ -1.28
SNX20-205ENST00000610485 A0A0G2JQZ4 141 aa7.05□□□□□ -1.28
SNX20-205ENST00000610485 TMEM256-PLSCR3K7ERE1 68 aa7.05□□□□□ -1.28
SNX20-205ENST00000610485 C1orf195Q5TG92 126 aa7.03□□□□□ -1.28
SNX20-205ENST00000610485 C9orf92A6NGG3 77 aa7.02□□□□□ -1.29
SNX20-205ENST00000610485 F8WEM9 126 aa7.02□□□□□ -1.29
SNX20-205ENST00000610485 ETDBQ3ZM63 59 aa7.02□□□□□ -1.29
SNX20-205ENST00000610485 PPDPFLQ8WWR9 84 aa7.01□□□□□ -1.29
SNX20-205ENST00000610485 IGLV8-61A0A075B6I0 122 aa7□□□□□ -1.29
SNX20-205ENST00000610485 TEN1Q86WV5 123 aa7□□□□□ -1.29
SNX20-205ENST00000610485 Q6JHZ5 121 aa6.98□□□□□ -1.29
SNX20-205ENST00000610485 KRTAP9-2Q9BYQ4 174 aa6.98□□□□□ -1.29
SNX20-205ENST00000610485 JMJD7-PLA2G4BH0Y9G9 81 aa6.97□□□□□ -1.29
SNX20-205ENST00000610485 NDUFV3P56181 108 aaKnown RBP6.97□□□□□ -1.29
SNX20-205ENST00000610485 PCOTHQ58A44 107 aa6.97□□□□□ -1.29
SNX20-205ENST00000610485 IGFL1Q6UW32 110 aa6.96□□□□□ -1.3
SNX20-205ENST00000610485 A0A1B0GV72 72 aa6.95□□□□□ -1.3
SNX20-205ENST00000610485 TRBV7-7A0A0K0K1E9 115 aa6.94□□□□□ -1.3
SNX20-205ENST00000610485 RBM3P98179 157 aaKnown RBP6.94□□□□□ -1.3
SNX20-205ENST00000610485 OBSCN-AS1Q96MR7 158 aa6.93□□□□□ -1.3
SNX20-205ENST00000610485 RPL37P61927 97 aaKnown RBP6.92□□□□□ -1.3
SNX20-205ENST00000610485 KRTAP19-2Q3LHN2 52 aa6.92□□□□□ -1.3
SNX20-205ENST00000610485 LCE2CQ5TA81 110 aa6.92□□□□□ -1.3
SNX20-205ENST00000610485 DSCR8Q96T75 97 aa6.91□□□□□ -1.3
SNX20-205ENST00000610485 C14orf132Q9NPU4 83 aa6.91□□□□□ -1.3
SNX20-205ENST00000610485 J3QR89 54 aa6.9□□□□□ -1.3
SNX20-205ENST00000610485 PDE6GP18545 87 aa6.88□□□□□ -1.31
SNX20-205ENST00000610485 LOC110117498A0A087WWA1 95 aa6.87□□□□□ -1.31
SNX20-205ENST00000610485 K7ERU9 68 aa6.87□□□□□ -1.31
SNX20-205ENST00000610485 TRBV7-4A0A0J9YYF1 115 aa6.86□□□□□ -1.31
SNX20-205ENST00000610485 CCKP06307 115 aa6.86□□□□□ -1.31
SNX20-205ENST00000610485 Q6Q795 121 aa6.86□□□□□ -1.31
SNX20-205ENST00000610485 C21orf62-AS1Q17RA5 79 aa6.85□□□□□ -1.31
SNX20-205ENST00000610485 Q6ZQT0 140 aa6.85□□□□□ -1.31
SNX20-205ENST00000610485 VPS25Q9BRG1 176 aa6.84□□□□□ -1.31
SNX20-205ENST00000610485 MT1HP80294 61 aa6.83□□□□□ -1.32
SNX20-205ENST00000610485 SS18L2Q9UHA2 77 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms