RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 SNCGO76070 127 aa7.25□□□□□ -1.25
USE1-209ENST00000601592 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.25□□□□□ -1.25
USE1-209ENST00000601592 LIMD2Q9BT23 127 aa7.25□□□□□ -1.25
USE1-209ENST00000601592 CDIP1Q9H305 208 aa7.25□□□□□ -1.25
USE1-209ENST00000601592 A0A0G2JQZ4 141 aa7.24□□□□□ -1.25
USE1-209ENST00000601592 H0YGX0 51 aa7.24□□□□□ -1.25
USE1-209ENST00000601592 K7ERJ3 54 aa7.24□□□□□ -1.25
USE1-209ENST00000601592 TPRXLQ17RH7 258 aa7.24□□□□□ -1.25
USE1-209ENST00000601592 PSMB2P49721 201 aa7.22□□□□□ -1.25
USE1-209ENST00000601592 FAM218AQ96MZ4 157 aa7.22□□□□□ -1.25
USE1-209ENST00000601592 TRIAP1O43715 76 aa7.21□□□□□ -1.26
USE1-209ENST00000601592 CD164Q04900 197 aa7.21□□□□□ -1.26
USE1-209ENST00000601592 SNHG12Q9BXW3 62 aa7.21□□□□□ -1.26
USE1-209ENST00000601592 SMIM6P0DI80 62 aa7.2□□□□□ -1.26
USE1-209ENST00000601592 PPDPFLQ8WWR9 84 aa7.19□□□□□ -1.26
USE1-209ENST00000601592 OCIAD2Q56VL3 154 aa7.18□□□□□ -1.26
USE1-209ENST00000601592 CLEC2BQ92478 149 aa7.18□□□□□ -1.26
USE1-209ENST00000601592 COX6CP09669 75 aa7.17□□□□□ -1.26
USE1-209ENST00000601592 Q6JHZ5 121 aa7.17□□□□□ -1.26
USE1-209ENST00000601592 A0A1B0GX51 115 aa7.16□□□□□ -1.26
USE1-209ENST00000601592 H3BUT2 72 aa7.16□□□□□ -1.26
USE1-209ENST00000601592 DNAL4O96015 105 aa7.16□□□□□ -1.26
USE1-209ENST00000601592 KRTAP13-3Q3SY46 172 aa7.16□□□□□ -1.26
USE1-209ENST00000601592 IGFL1Q6UW32 110 aa7.16□□□□□ -1.26
USE1-209ENST00000601592 FABP2P12104 132 aa7.15□□□□□ -1.26
USE1-209ENST00000601592 IGLV8-61A0A075B6I0 122 aa7.14□□□□□ -1.27
USE1-209ENST00000601592 GHRHP01286 108 aa7.14□□□□□ -1.27
USE1-209ENST00000601592 M0R143 59 aa7.13□□□□□ -1.27
USE1-209ENST00000601592 TCL1BO95988 128 aa7.13□□□□□ -1.27
USE1-209ENST00000601592 NDUFV3P56181 108 aaKnown RBP7.13□□□□□ -1.27
USE1-209ENST00000601592 RNF213Q63HN8 5207 aa7.12□□□□□ -1.27
USE1-209ENST00000601592 LOC105371267A0A1B0GV96 52 aa7.12□□□□□ -1.27
USE1-209ENST00000601592 SCGB1C2P0DMR2 95 aa7.12□□□□□ -1.27
USE1-209ENST00000601592 TSTD3H0UI37 97 aa7.11□□□□□ -1.27
USE1-209ENST00000601592 Q5XG85 94 aa7.11□□□□□ -1.27
USE1-209ENST00000601592 ORMDL1Q9P0S3 153 aa7.11□□□□□ -1.27
USE1-209ENST00000601592 TRBV7-7A0A0K0K1E9 115 aa7.1□□□□□ -1.27
USE1-209ENST00000601592 H3BMG7 143 aa7.1□□□□□ -1.27
USE1-209ENST00000601592 C1orf195Q5TG92 126 aa7.1□□□□□ -1.27
USE1-209ENST00000601592 A0A1B0GV72 72 aa7.09□□□□□ -1.27
USE1-209ENST00000601592 C9orf92A6NGG3 77 aa7.09□□□□□ -1.27
USE1-209ENST00000601592 BATFQ16520 125 aa7.07□□□□□ -1.28
USE1-209ENST00000601592 NAA38Q9BRA0 125 aaKnown RBP7.07□□□□□ -1.28
USE1-209ENST00000601592 H3BQ85 93 aa7.06□□□□□ -1.28
USE1-209ENST00000601592 TMEM256-PLSCR3K7ERE1 68 aa7.05□□□□□ -1.28
USE1-209ENST00000601592 XP32Q5T750 250 aa7.05□□□□□ -1.28
USE1-209ENST00000601592 LST1O00453 97 aa7.04□□□□□ -1.28
USE1-209ENST00000601592 TRACP01848 142 aa7.04□□□□□ -1.28
USE1-209ENST00000601592 TEN1Q86WV5 123 aa7.04□□□□□ -1.28
USE1-209ENST00000601592 MUC17Q685J3 4493 aa7.03□□□□□ -1.28
USE1-209ENST00000601592 SEC61BP60468 96 aaKnown RBP7.03□□□□□ -1.28
USE1-209ENST00000601592 ASB16-AS1Q495Z4 193 aa7.02□□□□□ -1.29
USE1-209ENST00000601592 ANKRD29Q8N6D5 301 aa7.02□□□□□ -1.29
USE1-209ENST00000601592 SS18L2Q9UHA2 77 aa7.02□□□□□ -1.29
USE1-209ENST00000601592 A0A087WSZ3 146 aa7.01□□□□□ -1.29
USE1-209ENST00000601592 Q6Q795 121 aa7.01□□□□□ -1.29
USE1-209ENST00000601592 A0A0U1RQV1 116 aa7□□□□□ -1.29
USE1-209ENST00000601592 UBE2V1Q13404 147 aa7□□□□□ -1.29
USE1-209ENST00000601592 A0A1W2PNM2 257 aa6.99□□□□□ -1.29
USE1-209ENST00000601592 ATXN8Q156A1 80 aa6.99□□□□□ -1.29
USE1-209ENST00000601592 BAALC-AS2P0C853 105 aa6.98□□□□□ -1.29
USE1-209ENST00000601592 LYRM7Q5U5X0 104 aa6.98□□□□□ -1.29
USE1-209ENST00000601592 MUC2Q02817 5179 aa6.97□□□□□ -1.29
USE1-209ENST00000601592 CCKP06307 115 aa6.96□□□□□ -1.3
USE1-209ENST00000601592 VPS25Q9BRG1 176 aa6.96□□□□□ -1.3
USE1-209ENST00000601592 RBM3P98179 157 aaKnown RBP6.95□□□□□ -1.3
USE1-209ENST00000601592 TRBV7-4A0A0J9YYF1 115 aa6.94□□□□□ -1.3
USE1-209ENST00000601592 PCOTHQ58A44 107 aa6.94□□□□□ -1.3
USE1-209ENST00000601592 DSCR8Q96T75 97 aa6.94□□□□□ -1.3
USE1-209ENST00000601592 OBSCN-AS1Q96MR7 158 aa6.93□□□□□ -1.3
USE1-209ENST00000601592 SIGMAR1Q99720 223 aa6.93□□□□□ -1.3
USE1-209ENST00000601592 C9orf118A6NHY6 69 aa6.91□□□□□ -1.3
USE1-209ENST00000601592 C9JAW5 83 aa6.91□□□□□ -1.3
USE1-209ENST00000601592 KRTAP4-1Q9BYQ7 146 aa6.91□□□□□ -1.3
USE1-209ENST00000601592 TRBV20-1A0A075B6N2 111 aa6.9□□□□□ -1.3
USE1-209ENST00000601592 TAX1BP3O14907 124 aa6.9□□□□□ -1.3
USE1-209ENST00000601592 RPL37P61927 97 aaKnown RBP6.9□□□□□ -1.3
USE1-209ENST00000601592 Q96NJ1 140 aa6.9□□□□□ -1.3
USE1-209ENST00000601592 IGKV4-1P06312 121 aa6.88□□□□□ -1.31
USE1-209ENST00000601592 A0A1W2PPM0 123 aa6.87□□□□□ -1.31
USE1-209ENST00000601592 JMJD7-PLA2G4BH0Y9G9 81 aa6.87□□□□□ -1.31
USE1-209ENST00000601592 DEFB116Q30KQ4 102 aa6.87□□□□□ -1.31
USE1-209ENST00000601592 DSCR10P59022 87 aa6.85□□□□□ -1.31
USE1-209ENST00000601592 MTURNQ8N3F0 131 aa6.85□□□□□ -1.31
USE1-209ENST00000601592 C14orf132Q9NPU4 83 aa6.84□□□□□ -1.31
USE1-209ENST00000601592 Q6ZQT0 140 aa6.83□□□□□ -1.32
USE1-209ENST00000601592 Q75L30 129 aa6.82□□□□□ -1.32
USE1-209ENST00000601592 LINC00472Q9H8W2 130 aa6.82□□□□□ -1.32
USE1-209ENST00000601592 LOC110117498A0A087WWA1 95 aa6.81□□□□□ -1.32
USE1-209ENST00000601592 H3BT86 120 aa6.81□□□□□ -1.32
USE1-209ENST00000601592 C21orf62-AS1Q17RA5 79 aa6.81□□□□□ -1.32
USE1-209ENST00000601592 COL5A1-AS1Q5SY13 56 aa6.81□□□□□ -1.32
USE1-209ENST00000601592 ATP11AUNQ6ZP68 121 aa6.81□□□□□ -1.32
USE1-209ENST00000601592 SPCS1Q9Y6A9 102 aa6.81□□□□□ -1.32
USE1-209ENST00000601592 IGHV6-1A0A0B4J1U7 121 aa6.8□□□□□ -1.32
USE1-209ENST00000601592 PCP4L1A6NKN8 68 aa6.8□□□□□ -1.32
USE1-209ENST00000601592 PDE6GP18545 87 aa6.8□□□□□ -1.32
USE1-209ENST00000601592 LINC00313P59037 77 aa6.8□□□□□ -1.32
USE1-209ENST00000601592 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
USE1-209ENST00000601592 C20orf166-AS1Q96NR2 134 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms