RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 A0A0G2JQZ4 141 aa11.39□□□□□ -0.59
SSBP4-210ENST00000601444 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.37□□□□□ -0.59
SSBP4-210ENST00000601444 IGLV7-46A0A075B6I9 117 aa11.36□□□□□ -0.59
SSBP4-210ENST00000601444 H0YGX0 51 aa11.36□□□□□ -0.59
SSBP4-210ENST00000601444 TRIAP1O43715 76 aa11.36□□□□□ -0.59
SSBP4-210ENST00000601444 RPS29P62273 56 aaKnown RBP11.36□□□□□ -0.59
SSBP4-210ENST00000601444 CLEC2BQ92478 149 aa11.3□□□□□ -0.6
SSBP4-210ENST00000601444 PSMB2P49721 201 aa11.29□□□□□ -0.6
SSBP4-210ENST00000601444 FP248Q71RG6 208 aaPredicted RBP11.29□□□□□ -0.6
SSBP4-210ENST00000601444 F8WEM9 126 aa11.28□□□□□ -0.6
SSBP4-210ENST00000601444 SNCGO76070 127 aa11.28□□□□□ -0.6
SSBP4-210ENST00000601444 CD164Q04900 197 aa11.27□□□□□ -0.61
SSBP4-210ENST00000601444 TPRXLQ17RH7 258 aa11.27□□□□□ -0.61
SSBP4-210ENST00000601444 PPDPFLQ8WWR9 84 aa11.26□□□□□ -0.61
SSBP4-210ENST00000601444 SNHG12Q9BXW3 62 aa11.26□□□□□ -0.61
SSBP4-210ENST00000601444 OCIAD2Q56VL3 154 aa11.25□□□□□ -0.61
SSBP4-210ENST00000601444 IGLV8-61A0A075B6I0 122 aa11.24□□□□□ -0.61
SSBP4-210ENST00000601444 A0A1B0GX51 115 aa11.24□□□□□ -0.61
SSBP4-210ENST00000601444 LIMD2Q9BT23 127 aa11.24□□□□□ -0.61
SSBP4-210ENST00000601444 TSTD3H0UI37 97 aa11.22□□□□□ -0.61
SSBP4-210ENST00000601444 H3BUT2 72 aa11.22□□□□□ -0.61
SSBP4-210ENST00000601444 IGFL1Q6UW32 110 aa11.22□□□□□ -0.61
SSBP4-210ENST00000601444 M0R143 59 aa11.21□□□□□ -0.61
SSBP4-210ENST00000601444 COX6CP09669 75 aa11.21□□□□□ -0.61
SSBP4-210ENST00000601444 CDIP1Q9H305 208 aa11.21□□□□□ -0.61
SSBP4-210ENST00000601444 RNF213Q63HN8 5207 aa11.2□□□□□ -0.62
SSBP4-210ENST00000601444 KRTAP13-3Q3SY46 172 aa11.2□□□□□ -0.62
SSBP4-210ENST00000601444 NDUFV3P56181 108 aaKnown RBP11.19□□□□□ -0.62
SSBP4-210ENST00000601444 Q6JHZ5 121 aa11.19□□□□□ -0.62
SSBP4-210ENST00000601444 FABP2P12104 132 aa11.17□□□□□ -0.62
SSBP4-210ENST00000601444 Q5XG85 94 aa11.17□□□□□ -0.62
SSBP4-210ENST00000601444 SCGB1C2P0DMR2 95 aa11.16□□□□□ -0.62
SSBP4-210ENST00000601444 DNAL4O96015 105 aa11.14□□□□□ -0.63
SSBP4-210ENST00000601444 NAA38Q9BRA0 125 aaKnown RBP11.14□□□□□ -0.63
SSBP4-210ENST00000601444 GHRHP01286 108 aa11.13□□□□□ -0.63
SSBP4-210ENST00000601444 C1orf195Q5TG92 126 aa11.13□□□□□ -0.63
SSBP4-210ENST00000601444 ORMDL1Q9P0S3 153 aa11.13□□□□□ -0.63
SSBP4-210ENST00000601444 TRBV7-7A0A0K0K1E9 115 aa11.12□□□□□ -0.63
SSBP4-210ENST00000601444 H3BMG7 143 aa11.11□□□□□ -0.63
SSBP4-210ENST00000601444 LST1O00453 97 aa11.1□□□□□ -0.63
SSBP4-210ENST00000601444 BATFQ16520 125 aa11.1□□□□□ -0.63
SSBP4-210ENST00000601444 MUC17Q685J3 4493 aa11.09□□□□□ -0.63
SSBP4-210ENST00000601444 TCL1BO95988 128 aa11.08□□□□□ -0.64
SSBP4-210ENST00000601444 TRACP01848 142 aa11.08□□□□□ -0.64
SSBP4-210ENST00000601444 A0A1B0GV72 72 aa11.07□□□□□ -0.64
SSBP4-210ENST00000601444 H3BQ85 93 aa11.05□□□□□ -0.64
SSBP4-210ENST00000601444 TMEM256-PLSCR3K7ERE1 68 aa11.05□□□□□ -0.64
SSBP4-210ENST00000601444 C9orf92A6NGG3 77 aa11.03□□□□□ -0.64
SSBP4-210ENST00000601444 Q6Q795 121 aa11.03□□□□□ -0.64
SSBP4-210ENST00000601444 MUC2Q02817 5179 aa11.03□□□□□ -0.64
SSBP4-210ENST00000601444 ASB16-AS1Q495Z4 193 aa11.02□□□□□ -0.65
SSBP4-210ENST00000601444 TEN1Q86WV5 123 aa11.02□□□□□ -0.65
SSBP4-210ENST00000601444 XP32Q5T750 250 aa11.01□□□□□ -0.65
SSBP4-210ENST00000601444 A0A1W2PNM2 257 aa11□□□□□ -0.65
SSBP4-210ENST00000601444 UBE2V1Q13404 147 aa11□□□□□ -0.65
SSBP4-210ENST00000601444 BAALC-AS2P0C853 105 aa10.98□□□□□ -0.65
SSBP4-210ENST00000601444 ATXN8Q156A1 80 aa10.98□□□□□ -0.65
SSBP4-210ENST00000601444 ANKRD29Q8N6D5 301 aa10.98□□□□□ -0.65
SSBP4-210ENST00000601444 A0A087WSZ3 146 aa10.96□□□□□ -0.65
SSBP4-210ENST00000601444 TAX1BP3O14907 124 aa10.94□□□□□ -0.66
SSBP4-210ENST00000601444 C9orf118A6NHY6 69 aa10.92□□□□□ -0.66
SSBP4-210ENST00000601444 SS18L2Q9UHA2 77 aa10.92□□□□□ -0.66
SSBP4-210ENST00000601444 LYRM7Q5U5X0 104 aa10.91□□□□□ -0.66
SSBP4-210ENST00000601444 TRBV7-4A0A0J9YYF1 115 aa10.9□□□□□ -0.66
SSBP4-210ENST00000601444 RBM3P98179 157 aaKnown RBP10.9□□□□□ -0.66
SSBP4-210ENST00000601444 CCKP06307 115 aa10.89□□□□□ -0.67
SSBP4-210ENST00000601444 SEC61BP60468 96 aaKnown RBP10.89□□□□□ -0.67
SSBP4-210ENST00000601444 TRBV20-1A0A075B6N2 111 aa10.88□□□□□ -0.67
SSBP4-210ENST00000601444 Q96NJ1 140 aa10.88□□□□□ -0.67
SSBP4-210ENST00000601444 KRTAP4-1Q9BYQ7 146 aa10.88□□□□□ -0.67
SSBP4-210ENST00000601444 A0A1W2PPM0 123 aa10.86□□□□□ -0.67
SSBP4-210ENST00000601444 C9JAW5 83 aa10.85□□□□□ -0.67
SSBP4-210ENST00000601444 DSCR8Q96T75 97 aa10.85□□□□□ -0.67
SSBP4-210ENST00000601444 VPS25Q9BRG1 176 aa10.84□□□□□ -0.67
SSBP4-210ENST00000601444 PCOTHQ58A44 107 aa10.81□□□□□ -0.68
SSBP4-210ENST00000601444 OBSCN-AS1Q96MR7 158 aa10.8□□□□□ -0.68
SSBP4-210ENST00000601444 MTURNQ8N3F0 131 aa10.79□□□□□ -0.68
SSBP4-210ENST00000601444 DEFB116Q30KQ4 102 aa10.78□□□□□ -0.68
SSBP4-210ENST00000601444 COL5A1-AS1Q5SY13 56 aa10.78□□□□□ -0.68
SSBP4-210ENST00000601444 PCP4L1A6NKN8 68 aa10.77□□□□□ -0.69
SSBP4-210ENST00000601444 JMJD7-PLA2G4BH0Y9G9 81 aa10.77□□□□□ -0.69
SSBP4-210ENST00000601444 RPL37P61927 97 aaKnown RBP10.77□□□□□ -0.69
SSBP4-210ENST00000601444 Q6ZQT0 140 aa10.76□□□□□ -0.69
SSBP4-210ENST00000601444 LINC00472Q9H8W2 130 aa10.76□□□□□ -0.69
SSBP4-210ENST00000601444 SIGMAR1Q99720 223 aa10.75□□□□□ -0.69
SSBP4-210ENST00000601444 C14orf132Q9NPU4 83 aa10.75□□□□□ -0.69
SSBP4-210ENST00000601444 IGKV4-1P06312 121 aa10.74□□□□□ -0.69
SSBP4-210ENST00000601444 LOC110117498A0A087WWA1 95 aa10.73□□□□□ -0.69
SSBP4-210ENST00000601444 SPCS1Q9Y6A9 102 aa10.73□□□□□ -0.69
SSBP4-210ENST00000601444 A0A0U1RQV1 116 aa10.71□□□□□ -0.69
SSBP4-210ENST00000601444 H3BT86 120 aa10.7□□□□□ -0.7
SSBP4-210ENST00000601444 DSCR10P59022 87 aa10.7□□□□□ -0.7
SSBP4-210ENST00000601444 FAT4Q6V0I7 4981 aa10.69□□□□□ -0.7
SSBP4-210ENST00000601444 PDE6GP18545 87 aa10.68□□□□□ -0.7
SSBP4-210ENST00000601444 Q75L30 129 aa10.65□□□□□ -0.7
SSBP4-210ENST00000601444 NOTCH2NLQ7Z3S9 236 aa10.65□□□□□ -0.7
SSBP4-210ENST00000601444 C21orf62-AS1Q17RA5 79 aa10.64□□□□□ -0.71
SSBP4-210ENST00000601444 SMCPP49901 116 aaPredicted RBP10.63□□□□□ -0.71
SSBP4-210ENST00000601444 LINC00313P59037 77 aa10.62□□□□□ -0.71
SSBP4-210ENST00000601444 IGHV6-1A0A0B4J1U7 121 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms