RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 PRLHP81277 87 aa11.71□□□□□ -0.54
ARHGEF1-221ENST00000600387 H0Y9P7 68 aa11.7□□□□□ -0.54
ARHGEF1-221ENST00000600387 CASC2Q6XLA1 102 aa11.7□□□□□ -0.54
ARHGEF1-221ENST00000600387 UBE2AP49459 152 aa11.69□□□□□ -0.54
ARHGEF1-221ENST00000600387 A8MUN3 132 aa11.69□□□□□ -0.54
ARHGEF1-221ENST00000600387 PMAIP1Q13794 54 aa11.69□□□□□ -0.54
ARHGEF1-221ENST00000600387 TENM3Q9P273 2699 aa11.68□□□□□ -0.54
ARHGEF1-221ENST00000600387 SEC61GP60059 68 aa11.67□□□□□ -0.54
ARHGEF1-221ENST00000600387 HELZ2Q9BYK8 2649 aaKnown RBP11.66□□□□□ -0.54
ARHGEF1-221ENST00000600387 C16orf90A8MZG2 172 aa11.66□□□□□ -0.54
ARHGEF1-221ENST00000600387 A8MWP4 228 aa11.65□□□□□ -0.54
ARHGEF1-221ENST00000600387 PRB2P02812 416 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF1-221ENST00000600387 CNBPP62633 177 aaKnown RBP11.65□□□□□ -0.54
ARHGEF1-221ENST00000600387 DNAH1Q9P2D7 4330 aa11.65□□□□□ -0.54
ARHGEF1-221ENST00000600387 A0A096LNI7 61 aa11.64□□□□□ -0.55
ARHGEF1-221ENST00000600387 Q5VV11 94 aa11.63□□□□□ -0.55
ARHGEF1-221ENST00000600387 LIMD2Q9BT23 127 aa11.63□□□□□ -0.55
ARHGEF1-221ENST00000600387 OTOGQ6ZRI0 2925 aa11.63□□□□□ -0.55
ARHGEF1-221ENST00000600387 SPRR1BP22528 89 aa11.62□□□□□ -0.55
ARHGEF1-221ENST00000600387 LINC00472Q9H8W2 130 aa11.62□□□□□ -0.55
ARHGEF1-221ENST00000600387 F8P00451 2351 aa11.61□□□□□ -0.55
ARHGEF1-221ENST00000600387 IGKV2-24A0A0C4DH68 120 aa11.61□□□□□ -0.55
ARHGEF1-221ENST00000600387 Q8N9P0 234 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF1-221ENST00000600387 C9orf163Q8N9P6 203 aa11.6□□□□□ -0.55
ARHGEF1-221ENST00000600387 ANK2Q01484 3957 aa11.59□□□□□ -0.55
ARHGEF1-221ENST00000600387 H0Y9J4 135 aa11.58□□□□□ -0.55
ARHGEF1-221ENST00000600387 CHKB-CPT1BH3BT56 60 aa11.54□□□□□ -0.56
ARHGEF1-221ENST00000600387 MMP24-AS1A0A0U1RRL7 71 aa11.52□□□□□ -0.57
ARHGEF1-221ENST00000600387 PRR15LQ9BU68 103 aa11.52□□□□□ -0.57
ARHGEF1-221ENST00000600387 IGLV7-46A0A075B6I9 117 aa11.51□□□□□ -0.57
ARHGEF1-221ENST00000600387 PHF5AQ7RTV0 110 aaKnown RBP11.5□□□□□ -0.57
ARHGEF1-221ENST00000600387 COA5Q86WW8 74 aa11.49□□□□□ -0.57
ARHGEF1-221ENST00000600387 BAHCC1Q9P281 2608 aa11.48□□□□□ -0.57
ARHGEF1-221ENST00000600387 KRTAP11-1Q8IUC1 163 aa11.48□□□□□ -0.57
ARHGEF1-221ENST00000600387 A8MU10 97 aa11.47□□□□□ -0.57
ARHGEF1-221ENST00000600387 Q75L30 129 aa11.47□□□□□ -0.57
ARHGEF1-221ENST00000600387 LOC101927531A0A1B0GV80 90 aa11.46□□□□□ -0.57
ARHGEF1-221ENST00000600387 FLNBO75369 2602 aaKnown RBP11.46□□□□□ -0.57
ARHGEF1-221ENST00000600387 CMYA5Q8N3K9 4069 aa11.46□□□□□ -0.58
ARHGEF1-221ENST00000600387 TP53AIP1Q9HCN2 124 aa11.46□□□□□ -0.58
ARHGEF1-221ENST00000600387 C14orf177Q52M58 125 aa11.45□□□□□ -0.58
ARHGEF1-221ENST00000600387 KRTAP1-5Q9BYS1 174 aa11.44□□□□□ -0.58
ARHGEF1-221ENST00000600387 CHTF8P0CG12 524 aa11.43□□□□□ -0.58
ARHGEF1-221ENST00000600387 DNAH3Q8TD57 4116 aa11.43□□□□□ -0.58
ARHGEF1-221ENST00000600387 HECTD1Q9ULT8 2610 aa11.42□□□□□ -0.58
ARHGEF1-221ENST00000600387 ASB16-AS1Q495Z4 193 aa11.42□□□□□ -0.58
ARHGEF1-221ENST00000600387 MOBPQ13875 183 aa11.41□□□□□ -0.58
ARHGEF1-221ENST00000600387 ATP11AUNQ6ZP68 121 aa11.39□□□□□ -0.59
ARHGEF1-221ENST00000600387 MAST4O15021 2626 aa11.38□□□□□ -0.59
ARHGEF1-221ENST00000600387 A6NED7 52 aa11.38□□□□□ -0.59
ARHGEF1-221ENST00000600387 PCOTHQ58A44 107 aa11.38□□□□□ -0.59
ARHGEF1-221ENST00000600387 Q96NJ1 140 aa11.38□□□□□ -0.59
ARHGEF1-221ENST00000600387 CD164Q04900 197 aa11.37□□□□□ -0.59
ARHGEF1-221ENST00000600387 Q6ZR54 194 aa11.37□□□□□ -0.59
ARHGEF1-221ENST00000600387 KRTAP24-1Q3LI83 254 aa11.37□□□□□ -0.59
ARHGEF1-221ENST00000600387 LCA10Q71F78 164 aa11.37□□□□□ -0.59
ARHGEF1-221ENST00000600387 KRTAP13-1Q8IUC0 172 aa11.35□□□□□ -0.59
ARHGEF1-221ENST00000600387 SRRM2Q9UQ35 2752 aaKnown RBP11.35□□□□□ -0.59
ARHGEF1-221ENST00000600387 C8orf17Q9NRJ1 99 aa11.34□□□□□ -0.59
ARHGEF1-221ENST00000600387 LINC01558Q9Y6Z2 57 aa11.34□□□□□ -0.59
ARHGEF1-221ENST00000600387 KTN1-AS1Q86SY8 53 aa11.34□□□□□ -0.59
ARHGEF1-221ENST00000600387 SPTSSBQ8NFR3 76 aa11.34□□□□□ -0.59
ARHGEF1-221ENST00000600387 TENM2Q9NT68 2774 aa11.34□□□□□ -0.59
ARHGEF1-221ENST00000600387 DNAH10Q8IVF4 4471 aa11.33□□□□□ -0.6
ARHGEF1-221ENST00000600387 CDC42SE1Q9NRR8 79 aa11.32□□□□□ -0.6
ARHGEF1-221ENST00000600387 UBE2DNLQ8IWF7 75 aa11.31□□□□□ -0.6
ARHGEF1-221ENST00000600387 PLAC8Q9NZF1 115 aa11.3□□□□□ -0.6
ARHGEF1-221ENST00000600387 IGLV9-49A0A0B4J1Y8 123 aa11.29□□□□□ -0.6
ARHGEF1-221ENST00000600387 HUWE1Q7Z6Z7 4374 aaKnown RBP11.29□□□□□ -0.6
ARHGEF1-221ENST00000600387 A0A1B0GVX0 72 aa11.28□□□□□ -0.6
ARHGEF1-221ENST00000600387 SPAG11AQ6PDA7 123 aa11.28□□□□□ -0.6
ARHGEF1-221ENST00000600387 NDUFS5O43920 106 aa11.26□□□□□ -0.61
ARHGEF1-221ENST00000600387 K7EIL1 84 aa11.26□□□□□ -0.61
ARHGEF1-221ENST00000600387 STAB1Q9NY15 2570 aa11.25□□□□□ -0.61
ARHGEF1-221ENST00000600387 IGHV6-1A0A0B4J1U7 121 aa11.25□□□□□ -0.61
ARHGEF1-221ENST00000600387 A6NN06 94 aa11.25□□□□□ -0.61
ARHGEF1-221ENST00000600387 LINC00483Q53H64 154 aa11.25□□□□□ -0.61
ARHGEF1-221ENST00000600387 MRPL34Q9BQ48 92 aaKnown RBP11.24□□□□□ -0.61
ARHGEF1-221ENST00000600387 CDK2AP2O75956 126 aa11.24□□□□□ -0.61
ARHGEF1-221ENST00000600387 DNAH9Q9NYC9 4486 aa11.23□□□□□ -0.61
ARHGEF1-221ENST00000600387 NOTCH1P46531 2555 aa11.23□□□□□ -0.61
ARHGEF1-221ENST00000600387 HRES1P13985 223 aa11.23□□□□□ -0.61
ARHGEF1-221ENST00000600387 APLNQ9ULZ1 77 aa11.22□□□□□ -0.61
ARHGEF1-221ENST00000600387 LYSTQ99698 3801 aa11.21□□□□□ -0.61
ARHGEF1-221ENST00000600387 PANO1I0J062 215 aa11.21□□□□□ -0.62
ARHGEF1-221ENST00000600387 ZNF706Q9Y5V0 76 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF1-221ENST00000600387 NBEAL1Q6ZS30 2694 aa11.19□□□□□ -0.62
ARHGEF1-221ENST00000600387 FBN1P35555 2871 aaKnown RBP11.17□□□□□ -0.62
ARHGEF1-221ENST00000600387 SPACA4Q8TDM5 124 aa11.15□□□□□ -0.62
ARHGEF1-221ENST00000600387 WWC2-AS2Q96NR7 200 aa11.15□□□□□ -0.62
ARHGEF1-221ENST00000600387 RBM12B-AS1Q9P1G2 102 aa11.14□□□□□ -0.63
ARHGEF1-221ENST00000600387 SPINK7P58062 85 aa11.12□□□□□ -0.63
ARHGEF1-221ENST00000600387 COL6A5A8TX70 2615 aa11.12□□□□□ -0.63
ARHGEF1-221ENST00000600387 NBDYA0A0U1RRE5 68 aa11.11□□□□□ -0.63
ARHGEF1-221ENST00000600387 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.11□□□□□ -0.63
ARHGEF1-221ENST00000600387 A0A087X002 238 aa11.1□□□□□ -0.63
ARHGEF1-221ENST00000600387 C7orf65Q6ZTY9 151 aa11.1□□□□□ -0.63
ARHGEF1-221ENST00000600387 NOTCH2NLQ7Z3S9 236 aa11.1□□□□□ -0.63
ARHGEF1-221ENST00000600387 Q6ZRN7 208 aaPredicted RBP11.1□□□□□ -0.63
ARHGEF1-221ENST00000600387 MDFIQ99750 246 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 205.5 ms