RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 MOBPQ13875 183 aa13.16□□□□□ -0.3
SNRNP70-204ENST00000595231 LAMTOR3Q9UHA4 124 aa13.16□□□□□ -0.3
SNRNP70-204ENST00000595231 LST1O00453 97 aa13.15□□□□□ -0.3
SNRNP70-204ENST00000595231 C9orf118A6NHY6 69 aa13.15□□□□□ -0.31
SNRNP70-204ENST00000595231 H3BUT2 72 aa13.15□□□□□ -0.31
SNRNP70-204ENST00000595231 OCIAD2Q56VL3 154 aa13.14□□□□□ -0.31
SNRNP70-204ENST00000595231 PPDPFLQ8WWR9 84 aa13.13□□□□□ -0.31
SNRNP70-204ENST00000595231 SSBP3-AS1Q7Z2R9 100 aa13.12□□□□□ -0.31
SNRNP70-204ENST00000595231 TRACP01848 142 aa13.12□□□□□ -0.31
SNRNP70-204ENST00000595231 TCL1BO95988 128 aa13.11□□□□□ -0.31
SNRNP70-204ENST00000595231 COL5A1-AS1Q5SY13 56 aa13.11□□□□□ -0.31
SNRNP70-204ENST00000595231 C9orf153Q5TBE3 101 aa13.11□□□□□ -0.31
SNRNP70-204ENST00000595231 Q8NBF4 154 aa13.11□□□□□ -0.31
SNRNP70-204ENST00000595231 DNAL4O96015 105 aa13.1□□□□□ -0.31
SNRNP70-204ENST00000595231 LINC00304Q8N9R0 145 aa13.09□□□□□ -0.31
SNRNP70-204ENST00000595231 A0A1W2PPM0 123 aa13.06□□□□□ -0.32
SNRNP70-204ENST00000595231 ORMDL1Q9P0S3 153 aa13.06□□□□□ -0.32
SNRNP70-204ENST00000595231 ATXN8Q156A1 80 aa13.05□□□□□ -0.32
SNRNP70-204ENST00000595231 LYRM7Q5U5X0 104 aa13.05□□□□□ -0.32
SNRNP70-204ENST00000595231 GHRHP01286 108 aa13.05□□□□□ -0.32
SNRNP70-204ENST00000595231 TRBV20-1A0A075B6N2 111 aa13.03□□□□□ -0.32
SNRNP70-204ENST00000595231 FABP2P12104 132 aa13.02□□□□□ -0.32
SNRNP70-204ENST00000595231 IGLV8-61A0A075B6I0 122 aa13.02□□□□□ -0.33
SNRNP70-204ENST00000595231 NDUFV3P56181 108 aaKnown RBP13.02□□□□□ -0.33
SNRNP70-204ENST00000595231 F8WEM9 126 aa13.01□□□□□ -0.33
SNRNP70-204ENST00000595231 SPAG11AQ6PDA7 123 aa13.01□□□□□ -0.33
SNRNP70-204ENST00000595231 H3BQ85 93 aa13□□□□□ -0.33
SNRNP70-204ENST00000595231 TMEM256-PLSCR3K7ERE1 68 aa13□□□□□ -0.33
SNRNP70-204ENST00000595231 A0A0G2JQZ4 141 aa12.99□□□□□ -0.33
SNRNP70-204ENST00000595231 C4orf48Q5BLP8 95 aa12.99□□□□□ -0.33
SNRNP70-204ENST00000595231 SPINK1P00995 79 aa12.96□□□□□ -0.33
SNRNP70-204ENST00000595231 BAALC-AS2P0C853 105 aa12.96□□□□□ -0.34
SNRNP70-204ENST00000595231 UBE2V1Q13404 147 aa12.94□□□□□ -0.34
SNRNP70-204ENST00000595231 IGFL1Q6UW32 110 aa12.94□□□□□ -0.34
SNRNP70-204ENST00000595231 H3BMG7 143 aa12.93□□□□□ -0.34
SNRNP70-204ENST00000595231 Q6JHZ5 121 aa12.93□□□□□ -0.34
SNRNP70-204ENST00000595231 HRCT1Q6UXD1 115 aa12.92□□□□□ -0.34
SNRNP70-204ENST00000595231 CD164Q04900 197 aa12.91□□□□□ -0.34
SNRNP70-204ENST00000595231 SPCS1Q9Y6A9 102 aa12.91□□□□□ -0.34
SNRNP70-204ENST00000595231 C9JAW5 83 aa12.9□□□□□ -0.34
SNRNP70-204ENST00000595231 RPS29P62273 56 aaKnown RBP12.89□□□□□ -0.35
SNRNP70-204ENST00000595231 ANKRD29Q8N6D5 301 aa12.88□□□□□ -0.35
SNRNP70-204ENST00000595231 HMCN2Q8NDA2 5059 aa12.85□□□□□ -0.35
SNRNP70-204ENST00000595231 A0A1B0GV72 72 aa12.85□□□□□ -0.35
SNRNP70-204ENST00000595231 K7EP34 96 aa12.83□□□□□ -0.36
SNRNP70-204ENST00000595231 RETNLBQ9BQ08 111 aa12.83□□□□□ -0.36
SNRNP70-204ENST00000595231 MTURNQ8N3F0 131 aa12.82□□□□□ -0.36
SNRNP70-204ENST00000595231 H3BT86 120 aa12.8□□□□□ -0.36
SNRNP70-204ENST00000595231 RBM3P98179 157 aaKnown RBP12.79□□□□□ -0.36
SNRNP70-204ENST00000595231 Q5XG85 94 aa12.78□□□□□ -0.36
SNRNP70-204ENST00000595231 Q6Q795 121 aa12.78□□□□□ -0.36
SNRNP70-204ENST00000595231 TRBV7-4A0A0J9YYF1 115 aa12.77□□□□□ -0.36
SNRNP70-204ENST00000595231 TRBV7-7A0A0K0K1E9 115 aa12.77□□□□□ -0.36
SNRNP70-204ENST00000595231 LIMD2Q9BT23 127 aa12.77□□□□□ -0.36
SNRNP70-204ENST00000595231 A0A1W2PNM2 257 aa12.77□□□□□ -0.37
SNRNP70-204ENST00000595231 TEN1Q86WV5 123 aa12.77□□□□□ -0.37
SNRNP70-204ENST00000595231 JMJD7-PLA2G4BH0Y9G9 81 aa12.74□□□□□ -0.37
SNRNP70-204ENST00000595231 SMCPP49901 116 aaPredicted RBP12.74□□□□□ -0.37
SNRNP70-204ENST00000595231 PRR4Q16378 134 aa12.74□□□□□ -0.37
SNRNP70-204ENST00000595231 OBSCN-AS1Q96MR7 158 aa12.73□□□□□ -0.37
SNRNP70-204ENST00000595231 PRO0461Q9UI25 63 aa12.73□□□□□ -0.37
SNRNP70-204ENST00000595231 GTF2H5Q6ZYL4 71 aa12.73□□□□□ -0.37
SNRNP70-204ENST00000595231 DSCR8Q96T75 97 aa12.73□□□□□ -0.37
SNRNP70-204ENST00000595231 A0A1B0GV90 55 aa12.7□□□□□ -0.38
SNRNP70-204ENST00000595231 CCKP06307 115 aa12.69□□□□□ -0.38
SNRNP70-204ENST00000595231 FP248Q71RG6 208 aaPredicted RBP12.67□□□□□ -0.38
SNRNP70-204ENST00000595231 A0A087WSZ3 146 aa12.66□□□□□ -0.38
SNRNP70-204ENST00000595231 LOC110117498A0A087WWA1 95 aa12.66□□□□□ -0.38
SNRNP70-204ENST00000595231 ASB16-AS1Q495Z4 193 aa12.66□□□□□ -0.38
SNRNP70-204ENST00000595231 C1orf195Q5TG92 126 aa12.66□□□□□ -0.38
SNRNP70-204ENST00000595231 C14orf132Q9NPU4 83 aa12.66□□□□□ -0.38
SNRNP70-204ENST00000595231 LPAP08519 4548 aa12.65□□□□□ -0.38
SNRNP70-204ENST00000595231 Q6ZQT0 140 aa12.65□□□□□ -0.38
SNRNP70-204ENST00000595231 IGLV7-46A0A075B6I9 117 aa12.64□□□□□ -0.39
SNRNP70-204ENST00000595231 VPS25Q9BRG1 176 aa12.62□□□□□ -0.39
SNRNP70-204ENST00000595231 PDE6GP18545 87 aa12.61□□□□□ -0.39
SNRNP70-204ENST00000595231 F8W1H4 67 aa12.61□□□□□ -0.39
SNRNP70-204ENST00000595231 SS18L2Q9UHA2 77 aa12.61□□□□□ -0.39
SNRNP70-204ENST00000595231 LRP2P98164 4655 aa12.59□□□□□ -0.39
SNRNP70-204ENST00000595231 TPRXLQ17RH7 258 aa12.54□□□□□ -0.4
SNRNP70-204ENST00000595231 Q96NJ1 140 aa12.54□□□□□ -0.4
SNRNP70-204ENST00000595231 A0A1B0GW54 56 aa12.51□□□□□ -0.41
SNRNP70-204ENST00000595231 KRTAP13-3Q3SY46 172 aa12.51□□□□□ -0.41
SNRNP70-204ENST00000595231 C21orf62-AS1Q17RA5 79 aa12.49□□□□□ -0.41
SNRNP70-204ENST00000595231 ETDBQ3ZM63 59 aa12.48□□□□□ -0.41
SNRNP70-204ENST00000595231 LINC00472Q9H8W2 130 aa12.47□□□□□ -0.41
SNRNP70-204ENST00000595231 UBR4Q5T4S7 5183 aa12.42□□□□□ -0.42
SNRNP70-204ENST00000595231 DEFB116Q30KQ4 102 aa12.42□□□□□ -0.42
SNRNP70-204ENST00000595231 CDIP1Q9H305 208 aa12.42□□□□□ -0.42
SNRNP70-204ENST00000595231 IGKV4-1P06312 121 aa12.38□□□□□ -0.43
SNRNP70-204ENST00000595231 C9orf92A6NGG3 77 aa12.38□□□□□ -0.43
SNRNP70-204ENST00000595231 SIGMAR1Q99720 223 aa12.34□□□□□ -0.43
SNRNP70-204ENST00000595231 NREPQ16612 68 aa12.33□□□□□ -0.44
SNRNP70-204ENST00000595231 XP32Q5T750 250 aa12.32□□□□□ -0.44
SNRNP70-204ENST00000595231 J3KT08 172 aa12.29□□□□□ -0.44
SNRNP70-204ENST00000595231 LINC00846Q9NV44 126 aa12.29□□□□□ -0.44
SNRNP70-204ENST00000595231 Q6ZVQ6 151 aa12.26□□□□□ -0.45
SNRNP70-204ENST00000595231 A0A1B0GVX0 72 aa12.21□□□□□ -0.45
SNRNP70-204ENST00000595231 DSCR10P59022 87 aa12.21□□□□□ -0.45
SNRNP70-204ENST00000595231 IGHV6-1A0A0B4J1U7 121 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms