RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CMYA5Q8N3K9 4069 aa8.27□□□□□ -1.09
VRK3-209ENST00000594948 C14orf177Q52M58 125 aa8.26□□□□□ -1.09
VRK3-209ENST00000594948 SPANXA2-OT1Q8N9U9 137 aa8.26□□□□□ -1.09
VRK3-209ENST00000594948 BAHCC1Q9P281 2608 aa8.26□□□□□ -1.09
VRK3-209ENST00000594948 A0A0G2JQZ4 141 aa8.26□□□□□ -1.09
VRK3-209ENST00000594948 FLNBO75369 2602 aaKnown RBP8.25□□□□□ -1.09
VRK3-209ENST00000594948 PRR15Q8IV56 129 aa8.25□□□□□ -1.09
VRK3-209ENST00000594948 PKIGQ9Y2B9 76 aa8.25□□□□□ -1.09
VRK3-209ENST00000594948 V9GYY9 64 aa8.25□□□□□ -1.09
VRK3-209ENST00000594948 IGKV2-24A0A0C4DH68 120 aa8.24□□□□□ -1.09
VRK3-209ENST00000594948 A8MWP4 228 aa8.24□□□□□ -1.09
VRK3-209ENST00000594948 DEFB116Q30KQ4 102 aa8.24□□□□□ -1.09
VRK3-209ENST00000594948 CASC2Q6XLA1 102 aa8.24□□□□□ -1.09
VRK3-209ENST00000594948 LINC00472Q9H8W2 130 aa8.23□□□□□ -1.09
VRK3-209ENST00000594948 ANK2Q01484 3957 aa8.22□□□□□ -1.09
VRK3-209ENST00000594948 H0Y9P7 68 aa8.22□□□□□ -1.09
VRK3-209ENST00000594948 LINC00208Q96KT6 92 aa8.22□□□□□ -1.09
VRK3-209ENST00000594948 RPL37AP61513 92 aaKnown RBP8.21□□□□□ -1.1
VRK3-209ENST00000594948 B9D2Q9BPU9 175 aa8.21□□□□□ -1.1
VRK3-209ENST00000594948 KRTAP1-5Q9BYS1 174 aa8.21□□□□□ -1.1
VRK3-209ENST00000594948 C1orf195Q5TG92 126 aa8.19□□□□□ -1.1
VRK3-209ENST00000594948 PHF5AQ7RTV0 110 aaKnown RBP8.19□□□□□ -1.1
VRK3-209ENST00000594948 K7EIL1 84 aa8.19□□□□□ -1.1
VRK3-209ENST00000594948 LRCOL1A6NCL2 159 aa8.18□□□□□ -1.1
VRK3-209ENST00000594948 KRTAP11-1Q8IUC1 163 aa8.18□□□□□ -1.1
VRK3-209ENST00000594948 C9orf163Q8N9P6 203 aa8.17□□□□□ -1.1
VRK3-209ENST00000594948 PRR4Q16378 134 aa8.16□□□□□ -1.1
VRK3-209ENST00000594948 MMP24-AS1A0A0U1RRL7 71 aa8.15□□□□□ -1.11
VRK3-209ENST00000594948 KRTAP13-1Q8IUC0 172 aa8.15□□□□□ -1.11
VRK3-209ENST00000594948 CHTF8P0CG12 524 aa8.14□□□□□ -1.11
VRK3-209ENST00000594948 UBE2DNLQ8IWF7 75 aa8.14□□□□□ -1.11
VRK3-209ENST00000594948 APLNQ9ULZ1 77 aa8.13□□□□□ -1.11
VRK3-209ENST00000594948 MAST4O15021 2626 aa8.13□□□□□ -1.11
VRK3-209ENST00000594948 PRB2P02812 416 aaPredicted RBP8.13□□□□□ -1.11
VRK3-209ENST00000594948 HUWE1Q7Z6Z7 4374 aaKnown RBP8.12□□□□□ -1.11
VRK3-209ENST00000594948 ASB16-AS1Q495Z4 193 aa8.12□□□□□ -1.11
VRK3-209ENST00000594948 PSPHP1O15172 72 aa8.11□□□□□ -1.11
VRK3-209ENST00000594948 LIMD2Q9BT23 127 aa8.11□□□□□ -1.11
VRK3-209ENST00000594948 TP53AIP1Q9HCN2 124 aa8.11□□□□□ -1.11
VRK3-209ENST00000594948 MOBPQ13875 183 aa8.1□□□□□ -1.11
VRK3-209ENST00000594948 IGLV7-46A0A075B6I9 117 aa8.08□□□□□ -1.12
VRK3-209ENST00000594948 Q8N9P0 234 aaPredicted RBP8.08□□□□□ -1.12
VRK3-209ENST00000594948 A8MUN3 132 aa8.08□□□□□ -1.12
VRK3-209ENST00000594948 Q96NJ1 140 aa8.08□□□□□ -1.12
VRK3-209ENST00000594948 F8P00451 2351 aa8.07□□□□□ -1.12
VRK3-209ENST00000594948 LINC00483Q53H64 154 aa8.07□□□□□ -1.12
VRK3-209ENST00000594948 Q5VV11 94 aa8.07□□□□□ -1.12
VRK3-209ENST00000594948 STAB1Q9NY15 2570 aa8.06□□□□□ -1.12
VRK3-209ENST00000594948 Q6ZR54 194 aa8.05□□□□□ -1.12
VRK3-209ENST00000594948 ZNF706Q9Y5V0 76 aaPredicted RBP8.03□□□□□ -1.12
VRK3-209ENST00000594948 NBDYA0A0U1RRE5 68 aa8.03□□□□□ -1.12
VRK3-209ENST00000594948 Q6ZRN7 208 aaPredicted RBP8.03□□□□□ -1.12
VRK3-209ENST00000594948 C8orf17Q9NRJ1 99 aa8.03□□□□□ -1.12
VRK3-209ENST00000594948 COA5Q86WW8 74 aa8.02□□□□□ -1.13
VRK3-209ENST00000594948 SPACA4Q8TDM5 124 aa8.02□□□□□ -1.13
VRK3-209ENST00000594948 LOC101927531A0A1B0GV80 90 aa8.01□□□□□ -1.13
VRK3-209ENST00000594948 DNAH10Q8IVF4 4471 aa8.01□□□□□ -1.13
VRK3-209ENST00000594948 DYNC2H1Q8NCM8 4307 aaKnown RBP8.01□□□□□ -1.13
VRK3-209ENST00000594948 PANO1I0J062 215 aa8.01□□□□□ -1.13
VRK3-209ENST00000594948 A0A1B0GVX0 72 aa8□□□□□ -1.13
VRK3-209ENST00000594948 FBN1P35555 2871 aaKnown RBP8□□□□□ -1.13
VRK3-209ENST00000594948 PMAIP1Q13794 54 aa7.99□□□□□ -1.13
VRK3-209ENST00000594948 Q75L30 129 aa7.99□□□□□ -1.13
VRK3-209ENST00000594948 DNAH9Q9NYC9 4486 aa7.99□□□□□ -1.13
VRK3-209ENST00000594948 NOTCH1P46531 2555 aa7.99□□□□□ -1.13
VRK3-209ENST00000594948 IGLV9-49A0A0B4J1Y8 123 aa7.99□□□□□ -1.13
VRK3-209ENST00000594948 PRR15LQ9BU68 103 aa7.98□□□□□ -1.13
VRK3-209ENST00000594948 CHKB-CPT1BH3BT56 60 aa7.97□□□□□ -1.13
VRK3-209ENST00000594948 CD164Q04900 197 aa7.96□□□□□ -1.13
VRK3-209ENST00000594948 WWC2-AS2Q96NR7 200 aa7.96□□□□□ -1.13
VRK3-209ENST00000594948 MRPL34Q9BQ48 92 aaKnown RBP7.96□□□□□ -1.14
VRK3-209ENST00000594948 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.96□□□□□ -1.14
VRK3-209ENST00000594948 NBEAL1Q6ZS30 2694 aa7.96□□□□□ -1.14
VRK3-209ENST00000594948 NUPR2A6NF83 97 aa7.95□□□□□ -1.14
VRK3-209ENST00000594948 CDK2AP2O75956 126 aa7.94□□□□□ -1.14
VRK3-209ENST00000594948 TENM2Q9NT68 2774 aa7.94□□□□□ -1.14
VRK3-209ENST00000594948 PCOTHQ58A44 107 aa7.94□□□□□ -1.14
VRK3-209ENST00000594948 LINC01558Q9Y6Z2 57 aa7.94□□□□□ -1.14
VRK3-209ENST00000594948 PLAC8Q9NZF1 115 aa7.93□□□□□ -1.14
VRK3-209ENST00000594948 IGHV6-1A0A0B4J1U7 121 aa7.92□□□□□ -1.14
VRK3-209ENST00000594948 MDFIQ99750 246 aa7.92□□□□□ -1.14
VRK3-209ENST00000594948 IGLV5-52A0A0A0MRZ9 124 aa7.92□□□□□ -1.14
VRK3-209ENST00000594948 LYSTQ99698 3801 aa7.91□□□□□ -1.14
VRK3-209ENST00000594948 A0A087WTM6 91 aa7.89□□□□□ -1.15
VRK3-209ENST00000594948 NDUFS5O43920 106 aa7.89□□□□□ -1.15
VRK3-209ENST00000594948 ZNF861PO60384 105 aa7.89□□□□□ -1.15
VRK3-209ENST00000594948 PSORS1C2Q9UIG4 136 aa7.89□□□□□ -1.15
VRK3-209ENST00000594948 ATP11AUNQ6ZP68 121 aa7.89□□□□□ -1.15
VRK3-209ENST00000594948 SRRM2Q9UQ35 2752 aaKnown RBP7.89□□□□□ -1.15
VRK3-209ENST00000594948 SEC61GP60059 68 aa7.88□□□□□ -1.15
VRK3-209ENST00000594948 CDC42SE1Q9NRR8 79 aa7.87□□□□□ -1.15
VRK3-209ENST00000594948 A6NED7 52 aa7.86□□□□□ -1.15
VRK3-209ENST00000594948 A8MU10 97 aa7.86□□□□□ -1.15
VRK3-209ENST00000594948 HRES1P13985 223 aa7.86□□□□□ -1.15
VRK3-209ENST00000594948 LCA10Q71F78 164 aa7.86□□□□□ -1.15
VRK3-209ENST00000594948 COL6A5A8TX70 2615 aa7.86□□□□□ -1.15
VRK3-209ENST00000594948 STAB2Q8WWQ8 2551 aa7.85□□□□□ -1.15
VRK3-209ENST00000594948 RTL8CO15255 209 aa7.85□□□□□ -1.15
VRK3-209ENST00000594948 KRTAP13-3Q3SY46 172 aa7.84□□□□□ -1.15
VRK3-209ENST00000594948 A0A087X002 238 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms