RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TRAV23DV6A0A075B6W5 121 aa5.65□□□□□ -1.5
BRCA1-226ENST00000591534 H7C2G1 150 aa5.65□□□□□ -1.5
BRCA1-226ENST00000591534 ZNF861PO60384 105 aa5.65□□□□□ -1.5
BRCA1-226ENST00000591534 TSPAN13O95857 204 aa5.65□□□□□ -1.5
BRCA1-226ENST00000591534 OCIAD2Q56VL3 154 aa5.65□□□□□ -1.5
BRCA1-226ENST00000591534 IGKV2-28A0A075B6P5 120 aa5.64□□□□□ -1.51
BRCA1-226ENST00000591534 K7ERJ3 54 aa5.64□□□□□ -1.51
BRCA1-226ENST00000591534 IGKV2D-28P01615 120 aa5.64□□□□□ -1.51
BRCA1-226ENST00000591534 KRTAP1-4P0C5Y4 121 aa5.64□□□□□ -1.51
BRCA1-226ENST00000591534 C9orf129Q5T035 196 aaKnown RBP5.64□□□□□ -1.51
BRCA1-226ENST00000591534 LINC00337Q8N6G1 96 aa5.64□□□□□ -1.51
BRCA1-226ENST00000591534 KCNQ1DNQ9H478 68 aa5.64□□□□□ -1.51
BRCA1-226ENST00000591534 SPCS1Q9Y6A9 102 aa5.64□□□□□ -1.51
BRCA1-226ENST00000591534 LPAP08519 4548 aa5.63□□□□□ -1.51
BRCA1-226ENST00000591534 NCR3O14931 201 aa5.63□□□□□ -1.51
BRCA1-226ENST00000591534 ZNF73O43830 326 aaPredicted RBP5.63□□□□□ -1.51
BRCA1-226ENST00000591534 TRACP01848 142 aa5.63□□□□□ -1.51
BRCA1-226ENST00000591534 DHRS4-AS1Q9P1J3 65 aa5.63□□□□□ -1.51
BRCA1-226ENST00000591534 C22orf24Q9Y442 160 aa5.63□□□□□ -1.51
BRCA1-226ENST00000591534 SMIM11BQ8TCY0 68 aa5.62□□□□□ -1.51
BRCA1-226ENST00000591534 TRBV10-3A0A0K0K1G6 114 aa5.61□□□□□ -1.51
BRCA1-226ENST00000591534 ETDCA0A1B0GVM5 59 aa5.61□□□□□ -1.51
BRCA1-226ENST00000591534 F8W1H4 67 aa5.61□□□□□ -1.51
BRCA1-226ENST00000591534 K7EP34 96 aa5.61□□□□□ -1.51
BRCA1-226ENST00000591534 CRYGAP11844 174 aa5.61□□□□□ -1.51
BRCA1-226ENST00000591534 COX7BP24311 80 aa5.61□□□□□ -1.51
BRCA1-226ENST00000591534 PPDPFLQ8WWR9 84 aa5.61□□□□□ -1.51
BRCA1-226ENST00000591534 BCE1O60756 84 aa5.6□□□□□ -1.51
BRCA1-226ENST00000591534 C6orf99Q4VX62 202 aa5.6□□□□□ -1.51
BRCA1-226ENST00000591534 TYMSOSQ8TAI1 123 aa5.6□□□□□ -1.51
BRCA1-226ENST00000591534 MUC2Q02817 5179 aa5.59□□□□□ -1.51
BRCA1-226ENST00000591534 LST1O00453 97 aa5.59□□□□□ -1.51
BRCA1-226ENST00000591534 IGKV2-30P06310 120 aa5.59□□□□□ -1.51
BRCA1-226ENST00000591534 LINC00167Q96N53 147 aa5.59□□□□□ -1.51
BRCA1-226ENST00000591534 hADV29S1A0JD25 119 aa5.58□□□□□ -1.52
BRCA1-226ENST00000591534 TMEM256-PLSCR3K7ERE1 68 aa5.58□□□□□ -1.52
BRCA1-226ENST00000591534 ELOF1P60002 83 aaKnown RBP5.58□□□□□ -1.52
BRCA1-226ENST00000591534 H3BT86 120 aa5.57□□□□□ -1.52
BRCA1-226ENST00000591534 SPRR1AP35321 89 aa5.57□□□□□ -1.52
BRCA1-226ENST00000591534 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-226ENST00000591534 Q75L30 129 aa5.57□□□□□ -1.52
BRCA1-226ENST00000591534 ORMDL1Q9P0S3 153 aa5.57□□□□□ -1.52
BRCA1-226ENST00000591534 LINC00575Q6W349 94 aa5.56□□□□□ -1.52
BRCA1-226ENST00000591534 Q6ZRX8 168 aa5.56□□□□□ -1.52
BRCA1-226ENST00000591534 ZNF706Q9Y5V0 76 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-226ENST00000591534 A0A1B0GV90 55 aa5.55□□□□□ -1.52
BRCA1-226ENST00000591534 J3QR89 54 aa5.55□□□□□ -1.52
BRCA1-226ENST00000591534 UBE2AP49459 152 aa5.55□□□□□ -1.52
BRCA1-226ENST00000591534 A0A087X002 238 aa5.54□□□□□ -1.52
BRCA1-226ENST00000591534 RPL37AP8A6NKH3 93 aa5.54□□□□□ -1.52
BRCA1-226ENST00000591534 H3BMG7 143 aa5.54□□□□□ -1.52
BRCA1-226ENST00000591534 TCL1BO95988 128 aa5.54□□□□□ -1.52
BRCA1-226ENST00000591534 FAM229BQ4G0N7 80 aa5.54□□□□□ -1.52
BRCA1-226ENST00000591534 JMJD7-PLA2G4BH0Y9G9 81 aa5.53□□□□□ -1.52
BRCA1-226ENST00000591534 PDE6GP18545 87 aa5.53□□□□□ -1.52
BRCA1-226ENST00000591534 FAM19A1Q7Z5A9 133 aa5.53□□□□□ -1.52
BRCA1-226ENST00000591534 ANKRD29Q8N6D5 301 aa5.53□□□□□ -1.52
BRCA1-226ENST00000591534 C9JAW5 83 aa5.52□□□□□ -1.53
BRCA1-226ENST00000591534 GAGE2AQ6NT46 116 aa5.52□□□□□ -1.53
BRCA1-226ENST00000591534 LINC00304Q8N9R0 145 aa5.52□□□□□ -1.53
BRCA1-226ENST00000591534 Q8NDZ9 215 aa5.52□□□□□ -1.53
BRCA1-226ENST00000591534 NAA38Q9BRA0 125 aaKnown RBP5.52□□□□□ -1.53
BRCA1-226ENST00000591534 BAALC-AS2P0C853 105 aa5.51□□□□□ -1.53
BRCA1-226ENST00000591534 KRTAP4-16G5E9R7 235 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-226ENST00000591534 CLEC2BQ92478 149 aa5.5□□□□□ -1.53
BRCA1-226ENST00000591534 TEX49A0A1B0GTD5 131 aa5.49□□□□□ -1.53
BRCA1-226ENST00000591534 F8WEM9 126 aa5.49□□□□□ -1.53
BRCA1-226ENST00000591534 TPRXLQ17RH7 258 aa5.49□□□□□ -1.53
BRCA1-226ENST00000591534 IGLV7-46A0A075B6I9 117 aa5.48□□□□□ -1.53
BRCA1-226ENST00000591534 SPAG11AQ6PDA7 123 aa5.48□□□□□ -1.53
BRCA1-226ENST00000591534 Q6ZQY7 126 aa5.48□□□□□ -1.53
BRCA1-226ENST00000591534 TEN1Q86WV5 123 aa5.48□□□□□ -1.53
BRCA1-226ENST00000591534 KRTAP13-1Q8IUC0 172 aa5.48□□□□□ -1.53
BRCA1-226ENST00000591534 ANAPC11Q9NYG5 84 aa5.48□□□□□ -1.53
BRCA1-226ENST00000591534 A0A1B0GW54 56 aa5.47□□□□□ -1.53
BRCA1-226ENST00000591534 KRTAP13-2Q52LG2 175 aa5.47□□□□□ -1.53
BRCA1-226ENST00000591534 RETNLBQ9BQ08 111 aa5.47□□□□□ -1.53
BRCA1-226ENST00000591534 LAMTOR3Q9UHA4 124 aa5.47□□□□□ -1.53
BRCA1-226ENST00000591534 K7ERU9 68 aa5.46□□□□□ -1.54
BRCA1-226ENST00000591534 DSCR8Q96T75 97 aa5.46□□□□□ -1.54
BRCA1-226ENST00000591534 HIGD2AQ9BW72 106 aa5.46□□□□□ -1.54
BRCA1-226ENST00000591534 IGLV5-48A0A075B6I7 105 aa5.45□□□□□ -1.54
BRCA1-226ENST00000591534 ACYP1P07311 99 aa5.45□□□□□ -1.54
BRCA1-226ENST00000591534 RBM3P98179 157 aaKnown RBP5.45□□□□□ -1.54
BRCA1-226ENST00000591534 FAM218AQ96MZ4 157 aa5.45□□□□□ -1.54
BRCA1-226ENST00000591534 PRLHP81277 87 aa5.44□□□□□ -1.54
BRCA1-226ENST00000591534 Q6JHZ5 121 aa5.44□□□□□ -1.54
BRCA1-226ENST00000591534 FP248Q71RG6 208 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-226ENST00000591534 SMCR5Q8TEV8 140 aa5.44□□□□□ -1.54
BRCA1-226ENST00000591534 PRO0461Q9UI25 63 aa5.44□□□□□ -1.54
BRCA1-226ENST00000591534 SPRR1BP22528 89 aa5.42□□□□□ -1.54
BRCA1-226ENST00000591534 NDUFV3P56181 108 aaKnown RBP5.42□□□□□ -1.54
BRCA1-226ENST00000591534 ETDBQ3ZM63 59 aa5.42□□□□□ -1.54
BRCA1-226ENST00000591534 Q8N9P0 234 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-226ENST00000591534 Q9BRP9 147 aa5.42□□□□□ -1.54
BRCA1-226ENST00000591534 FAT4Q6V0I7 4981 aa5.41□□□□□ -1.54
BRCA1-226ENST00000591534 FAM240AA0A1B0GVK7 77 aa5.4□□□□□ -1.54
BRCA1-226ENST00000591534 DEFB105AQ8NG35 78 aa5.4□□□□□ -1.54
BRCA1-226ENST00000591534 LOC110117498A0A087WWA1 95 aa5.39□□□□□ -1.55
BRCA1-226ENST00000591534 LINC00483Q53H64 154 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms