RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 Q6ZQY7 126 aa10.38□□□□□ -0.75
VAT1-208ENST00000590924 PPDPFLQ8WWR9 84 aa10.38□□□□□ -0.75
VAT1-208ENST00000590924 Q8N377 158 aa10.37□□□□□ -0.75
VAT1-208ENST00000590924 FAM218AQ96MZ4 157 aa10.37□□□□□ -0.75
VAT1-208ENST00000590924 GHRHP01286 108 aa10.35□□□□□ -0.75
VAT1-208ENST00000590924 RETNLBQ9BQ08 111 aa10.35□□□□□ -0.75
VAT1-208ENST00000590924 IGLV9-49A0A0B4J1Y8 123 aa10.34□□□□□ -0.75
VAT1-208ENST00000590924 SCGB1C2P0DMR2 95 aa10.34□□□□□ -0.75
VAT1-208ENST00000590924 BATFQ16520 125 aa10.34□□□□□ -0.75
VAT1-208ENST00000590924 SPAG11AQ6PDA7 123 aa10.34□□□□□ -0.75
VAT1-208ENST00000590924 SMIM29Q86T20 159 aa10.34□□□□□ -0.75
VAT1-208ENST00000590924 MOBPQ13875 183 aa10.33□□□□□ -0.76
VAT1-208ENST00000590924 Q8NBF4 154 aa10.32□□□□□ -0.76
VAT1-208ENST00000590924 CLEC2BQ92478 149 aa10.32□□□□□ -0.76
VAT1-208ENST00000590924 H3BQ85 93 aa10.31□□□□□ -0.76
VAT1-208ENST00000590924 TPRXLQ17RH7 258 aa10.31□□□□□ -0.76
VAT1-208ENST00000590924 C9orf153Q5TBE3 101 aa10.3□□□□□ -0.76
VAT1-208ENST00000590924 DNAL4O96015 105 aa10.29□□□□□ -0.76
VAT1-208ENST00000590924 TRACP01848 142 aa10.29□□□□□ -0.76
VAT1-208ENST00000590924 C4orf48Q5BLP8 95 aa10.29□□□□□ -0.76
VAT1-208ENST00000590924 LST1O00453 97 aa10.28□□□□□ -0.76
VAT1-208ENST00000590924 LYRM7Q5U5X0 104 aa10.27□□□□□ -0.77
VAT1-208ENST00000590924 SNHG12Q9BXW3 62 aa10.27□□□□□ -0.77
VAT1-208ENST00000590924 IGLV7-46A0A075B6I9 117 aa10.26□□□□□ -0.77
VAT1-208ENST00000590924 SPINK1P00995 79 aa10.26□□□□□ -0.77
VAT1-208ENST00000590924 CDIP1Q9H305 208 aa10.26□□□□□ -0.77
VAT1-208ENST00000590924 C9orf118A6NHY6 69 aa10.25□□□□□ -0.77
VAT1-208ENST00000590924 F8WEM9 126 aa10.25□□□□□ -0.77
VAT1-208ENST00000590924 TAX1BP3O14907 124 aa10.25□□□□□ -0.77
VAT1-208ENST00000590924 ORMDL1Q9P0S3 153 aa10.25□□□□□ -0.77
VAT1-208ENST00000590924 IGLV8-61A0A075B6I0 122 aa10.24□□□□□ -0.77
VAT1-208ENST00000590924 MUC17Q685J3 4493 aa10.23□□□□□ -0.77
VAT1-208ENST00000590924 RPS29P62273 56 aaKnown RBP10.23□□□□□ -0.77
VAT1-208ENST00000590924 NAA38Q9BRA0 125 aaKnown RBP10.23□□□□□ -0.77
VAT1-208ENST00000590924 TRBV20-1A0A075B6N2 111 aa10.22□□□□□ -0.77
VAT1-208ENST00000590924 PCP4L1A6NKN8 68 aa10.22□□□□□ -0.77
VAT1-208ENST00000590924 H3BUT2 72 aa10.22□□□□□ -0.77
VAT1-208ENST00000590924 TMEM256-PLSCR3K7ERE1 68 aa10.22□□□□□ -0.77
VAT1-208ENST00000590924 CD164Q04900 197 aa10.22□□□□□ -0.77
VAT1-208ENST00000590924 ATXN8Q156A1 80 aa10.22□□□□□ -0.77
VAT1-208ENST00000590924 COL5A1-AS1Q5SY13 56 aa10.22□□□□□ -0.77
VAT1-208ENST00000590924 Q6JHZ5 121 aa10.22□□□□□ -0.77
VAT1-208ENST00000590924 NDUFV3P56181 108 aaKnown RBP10.21□□□□□ -0.77
VAT1-208ENST00000590924 LCE2AQ5TA79 106 aaPredicted RBP10.21□□□□□ -0.77
VAT1-208ENST00000590924 TCL1BO95988 128 aa10.2□□□□□ -0.78
VAT1-208ENST00000590924 FABP2P12104 132 aa10.2□□□□□ -0.78
VAT1-208ENST00000590924 FP248Q71RG6 208 aaPredicted RBP10.18□□□□□ -0.78
VAT1-208ENST00000590924 FAT4Q6V0I7 4981 aa10.18□□□□□ -0.78
VAT1-208ENST00000590924 A0A1W2PPM0 123 aa10.17□□□□□ -0.78
VAT1-208ENST00000590924 UBE2V1Q13404 147 aa10.17□□□□□ -0.78
VAT1-208ENST00000590924 H3BMG7 143 aa10.14□□□□□ -0.79
VAT1-208ENST00000590924 BAALC-AS2P0C853 105 aa10.14□□□□□ -0.79
VAT1-208ENST00000590924 KRTAP9-2Q9BYQ4 174 aa10.14□□□□□ -0.79
VAT1-208ENST00000590924 IGFL1Q6UW32 110 aa10.13□□□□□ -0.79
VAT1-208ENST00000590924 LIMD2Q9BT23 127 aa10.12□□□□□ -0.79
VAT1-208ENST00000590924 Q5XG85 94 aa10.11□□□□□ -0.79
VAT1-208ENST00000590924 HRCT1Q6UXD1 115 aa10.1□□□□□ -0.79
VAT1-208ENST00000590924 A0A0G2JQZ4 141 aa10.09□□□□□ -0.79
VAT1-208ENST00000590924 KRTAP13-3Q3SY46 172 aa10.09□□□□□ -0.79
VAT1-208ENST00000590924 Q6Q795 121 aa10.08□□□□□ -0.8
VAT1-208ENST00000590924 ANKRD29Q8N6D5 301 aa10.08□□□□□ -0.8
VAT1-208ENST00000590924 C9JAW5 83 aa10.05□□□□□ -0.8
VAT1-208ENST00000590924 TEN1Q86WV5 123 aa10.05□□□□□ -0.8
VAT1-208ENST00000590924 SPCS1Q9Y6A9 102 aa10.05□□□□□ -0.8
VAT1-208ENST00000590924 TRBV7-7A0A0K0K1E9 115 aa10.04□□□□□ -0.8
VAT1-208ENST00000590924 RBM3P98179 157 aaKnown RBP10.04□□□□□ -0.8
VAT1-208ENST00000590924 ASB16-AS1Q495Z4 193 aa10.04□□□□□ -0.8
VAT1-208ENST00000590924 JMJD7-PLA2G4BH0Y9G9 81 aa10.02□□□□□ -0.81
VAT1-208ENST00000590924 H3BT86 120 aa10.02□□□□□ -0.81
VAT1-208ENST00000590924 TRBV7-4A0A0J9YYF1 115 aa10□□□□□ -0.81
VAT1-208ENST00000590924 DSCR8Q96T75 97 aa10□□□□□ -0.81
VAT1-208ENST00000590924 A0A1W2PNM2 257 aa9.98□□□□□ -0.81
VAT1-208ENST00000590924 K7EP34 96 aa9.98□□□□□ -0.81
VAT1-208ENST00000590924 SS18L2Q9UHA2 77 aa9.97□□□□□ -0.81
VAT1-208ENST00000590924 PDE6GP18545 87 aa9.96□□□□□ -0.82
VAT1-208ENST00000590924 SEC61BP60468 96 aaKnown RBP9.96□□□□□ -0.82
VAT1-208ENST00000590924 OBSCN-AS1Q96MR7 158 aa9.96□□□□□ -0.82
VAT1-208ENST00000590924 A0A1B0GV72 72 aa9.95□□□□□ -0.82
VAT1-208ENST00000590924 GTF2H5Q6ZYL4 71 aa9.95□□□□□ -0.82
VAT1-208ENST00000590924 CCKP06307 115 aa9.94□□□□□ -0.82
VAT1-208ENST00000590924 C21orf62-AS1Q17RA5 79 aa9.94□□□□□ -0.82
VAT1-208ENST00000590924 C1orf195Q5TG92 126 aa9.94□□□□□ -0.82
VAT1-208ENST00000590924 LOC110117498A0A087WWA1 95 aa9.93□□□□□ -0.82
VAT1-208ENST00000590924 KRTAP4-1Q9BYQ7 146 aa9.93□□□□□ -0.82
VAT1-208ENST00000590924 A0A087WSZ3 146 aa9.91□□□□□ -0.82
VAT1-208ENST00000590924 A0A1B0GW54 56 aa9.91□□□□□ -0.82
VAT1-208ENST00000590924 XP32Q5T750 250 aa9.9□□□□□ -0.82
VAT1-208ENST00000590924 MTURNQ8N3F0 131 aa9.9□□□□□ -0.82
VAT1-208ENST00000590924 Q6ZQT0 140 aa9.89□□□□□ -0.83
VAT1-208ENST00000590924 PRO0461Q9UI25 63 aa9.89□□□□□ -0.83
VAT1-208ENST00000590924 SMCPP49901 116 aaPredicted RBP9.88□□□□□ -0.83
VAT1-208ENST00000590924 VPS25Q9BRG1 176 aa9.86□□□□□ -0.83
VAT1-208ENST00000590924 C14orf132Q9NPU4 83 aa9.86□□□□□ -0.83
VAT1-208ENST00000590924 KRTAP9-6A0A140TA67 174 aa9.85□□□□□ -0.83
VAT1-208ENST00000590924 F8W1H4 67 aa9.85□□□□□ -0.83
VAT1-208ENST00000590924 Q96NJ1 140 aa9.8□□□□□ -0.84
VAT1-208ENST00000590924 LINC00472Q9H8W2 130 aa9.78□□□□□ -0.84
VAT1-208ENST00000590924 LCE2CQ5TA81 110 aa9.72□□□□□ -0.85
VAT1-208ENST00000590924 LCE2DQ5TA82 110 aaPredicted RBP9.72□□□□□ -0.85
VAT1-208ENST00000590924 J3KT08 172 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms