RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 SRCAPQ6ZRS2 3230 aa6.8□□□□□ -1.32
SEH1L-208ENST00000590843 SPINK7P58062 85 aa6.79□□□□□ -1.32
SEH1L-208ENST00000590843 A0A0G2JQZ4 141 aa6.77□□□□□ -1.33
SEH1L-208ENST00000590843 C1orf195Q5TG92 126 aa6.77□□□□□ -1.33
SEH1L-208ENST00000590843 KRTAP29-1A8MX34 341 aaPredicted RBP6.76□□□□□ -1.33
SEH1L-208ENST00000590843 UBR5O95071 2799 aaPredicted RBP6.74□□□□□ -1.33
SEH1L-208ENST00000590843 R4GN34 69 aa6.74□□□□□ -1.33
SEH1L-208ENST00000590843 SPINT4Q6UDR6 99 aa6.72□□□□□ -1.33
SEH1L-208ENST00000590843 UQCR11O14957 56 aa6.71□□□□□ -1.33
SEH1L-208ENST00000590843 CRIPTQ9P021 101 aa6.71□□□□□ -1.34
SEH1L-208ENST00000590843 PANO1I0J062 215 aa6.68□□□□□ -1.34
SEH1L-208ENST00000590843 C4orf26Q17RF5 130 aa6.68□□□□□ -1.34
SEH1L-208ENST00000590843 LCA10Q71F78 164 aa6.67□□□□□ -1.34
SEH1L-208ENST00000590843 FLNCQ14315 2725 aa6.66□□□□□ -1.34
SEH1L-208ENST00000590843 A0A087X002 238 aa6.65□□□□□ -1.34
SEH1L-208ENST00000590843 MGAQ8IWI9 3026 aa6.65□□□□□ -1.34
SEH1L-208ENST00000590843 ASB16-AS1Q495Z4 193 aa6.65□□□□□ -1.34
SEH1L-208ENST00000590843 GOLGB1Q14789 3259 aaKnown RBP6.65□□□□□ -1.34
SEH1L-208ENST00000590843 Q75L30 129 aa6.65□□□□□ -1.34
SEH1L-208ENST00000590843 COA5Q86WW8 74 aa6.64□□□□□ -1.35
SEH1L-208ENST00000590843 EIF4EBP3O60516 100 aaPredicted RBP6.64□□□□□ -1.35
SEH1L-208ENST00000590843 RPL37P61927 97 aaKnown RBP6.64□□□□□ -1.35
SEH1L-208ENST00000590843 Q5XG85 94 aa6.62□□□□□ -1.35
SEH1L-208ENST00000590843 C20orf166-AS1Q96NR2 134 aa6.61□□□□□ -1.35
SEH1L-208ENST00000590843 H1FX-AS1Q4G0G2 97 aa6.6□□□□□ -1.35
SEH1L-208ENST00000590843 SPANXA2-OT1Q8N9U9 137 aa6.58□□□□□ -1.36
SEH1L-208ENST00000590843 A0A0D9SG42 100 aa6.58□□□□□ -1.36
SEH1L-208ENST00000590843 PSPHP1O15172 72 aa6.58□□□□□ -1.36
SEH1L-208ENST00000590843 TPRXLQ17RH7 258 aa6.58□□□□□ -1.36
SEH1L-208ENST00000590843 ITPR1Q14643 2758 aa6.58□□□□□ -1.36
SEH1L-208ENST00000590843 HTTP42858 3142 aa6.57□□□□□ -1.36
SEH1L-208ENST00000590843 RANBP2P49792 3224 aaKnown RBP6.56□□□□□ -1.36
SEH1L-208ENST00000590843 LINC00472Q9H8W2 130 aa6.56□□□□□ -1.36
SEH1L-208ENST00000590843 MMP24-AS1A0A0U1RRL7 71 aa6.56□□□□□ -1.36
SEH1L-208ENST00000590843 FLG2Q5D862 2391 aaPredicted RBP6.54□□□□□ -1.36
SEH1L-208ENST00000590843 A0A1B0GVY2 172 aa6.53□□□□□ -1.36
SEH1L-208ENST00000590843 CDC42SE1Q9NRR8 79 aa6.53□□□□□ -1.36
SEH1L-208ENST00000590843 Q5W150 140 aa6.53□□□□□ -1.36
SEH1L-208ENST00000590843 MIR22HGQ0VDD5 57 aa6.53□□□□□ -1.36
SEH1L-208ENST00000590843 SMCPP49901 116 aaPredicted RBP6.52□□□□□ -1.37
SEH1L-208ENST00000590843 DNAH12Q6ZR08 3092 aa6.52□□□□□ -1.37
SEH1L-208ENST00000590843 M0QZ58 72 aa6.52□□□□□ -1.37
SEH1L-208ENST00000590843 CYP4F30PQ9H0H9 118 aa6.51□□□□□ -1.37
SEH1L-208ENST00000590843 CCDC179H3BU77 68 aa6.51□□□□□ -1.37
SEH1L-208ENST00000590843 DMAC1Q96GE9 116 aa6.51□□□□□ -1.37
SEH1L-208ENST00000590843 PRO0461Q9UI25 63 aa6.51□□□□□ -1.37
SEH1L-208ENST00000590843 C5orf42Q9H799 3197 aa6.5□□□□□ -1.37
SEH1L-208ENST00000590843 APCP25054 2843 aa6.5□□□□□ -1.37
SEH1L-208ENST00000590843 PMAIP1Q13794 54 aa6.49□□□□□ -1.37
SEH1L-208ENST00000590843 UTRNP46939 3433 aa6.49□□□□□ -1.37
SEH1L-208ENST00000590843 A0A1B0GU33 70 aa6.49□□□□□ -1.37
SEH1L-208ENST00000590843 KRTAP4-16G5E9R7 235 aaPredicted RBP6.48□□□□□ -1.37
SEH1L-208ENST00000590843 KRTAP13-2Q52LG2 175 aa6.47□□□□□ -1.37
SEH1L-208ENST00000590843 ASH1LQ9NR48 2969 aaKnown RBP6.46□□□□□ -1.38
SEH1L-208ENST00000590843 TNRC18O15417 2968 aaPredicted RBP6.44□□□□□ -1.38
SEH1L-208ENST00000590843 H7BZZ5 65 aa6.44□□□□□ -1.38
SEH1L-208ENST00000590843 Q8NDZ9 215 aa6.43□□□□□ -1.38
SEH1L-208ENST00000590843 KRTAP13-1Q8IUC0 172 aa6.42□□□□□ -1.38
SEH1L-208ENST00000590843 RPS28P62857 69 aaKnown RBP6.42□□□□□ -1.38
SEH1L-208ENST00000590843 Q8N9P0 234 aaPredicted RBP6.4□□□□□ -1.39
SEH1L-208ENST00000590843 KLKP1Q107X0 134 aa6.38□□□□□ -1.39
SEH1L-208ENST00000590843 ADM2Q7Z4H4 148 aa6.37□□□□□ -1.39
SEH1L-208ENST00000590843 REV3LO60673 3130 aa6.37□□□□□ -1.39
SEH1L-208ENST00000590843 UTP20O75691 2785 aaKnown RBP6.37□□□□□ -1.39
SEH1L-208ENST00000590843 NIPBLQ6KC79 2804 aaeCLIP6.36□□□□□ -1.39
SEH1L-208ENST00000590843 PRUNE2Q8WUY3 3088 aa6.36□□□□□ -1.39
SEH1L-208ENST00000590843 FRYQ5TBA9 3013 aa6.34□□□□□ -1.39
SEH1L-208ENST00000590843 XP32Q5T750 250 aa6.33□□□□□ -1.4
SEH1L-208ENST00000590843 PRO2289Q9P1D8 64 aa6.32□□□□□ -1.4
SEH1L-208ENST00000590843 A8MUU9 505 aa6.31□□□□□ -1.4
SEH1L-208ENST00000590843 KRTAP11-1Q8IUC1 163 aa6.31□□□□□ -1.4
SEH1L-208ENST00000590843 KRTAP10-10P60014 251 aa6.29□□□□□ -1.4
SEH1L-208ENST00000590843 KRTAP10-8P60410 259 aa6.29□□□□□ -1.4
SEH1L-208ENST00000590843 OCR1Q9BZK8 76 aa6.29□□□□□ -1.4
SEH1L-208ENST00000590843 KRTAP1-4P0C5Y4 121 aa6.28□□□□□ -1.4
SEH1L-208ENST00000590843 LUZP6Q538Z0 58 aa6.26□□□□□ -1.41
SEH1L-208ENST00000590843 WDFY4Q6ZS81 3184 aa6.26□□□□□ -1.41
SEH1L-208ENST00000590843 Q1T7F1 81 aa6.25□□□□□ -1.41
SEH1L-208ENST00000590843 CRYBG3Q68DQ2 2970 aa6.23□□□□□ -1.41
SEH1L-208ENST00000590843 LAMA3Q16787 3333 aa6.23□□□□□ -1.41
SEH1L-208ENST00000590843 A0A0C4DFX4 3053 aa6.22□□□□□ -1.41
SEH1L-208ENST00000590843 KRTAP7-1Q8IUC3 87 aa6.22□□□□□ -1.41
SEH1L-208ENST00000590843 KRTAP13-3Q3SY46 172 aa6.22□□□□□ -1.41
SEH1L-208ENST00000590843 EYSQ5T1H1 3165 aa6.21□□□□□ -1.42
SEH1L-208ENST00000590843 NBEAL2Q6ZNJ1 2754 aa6.2□□□□□ -1.42
SEH1L-208ENST00000590843 TENM2Q9NT68 2774 aa6.2□□□□□ -1.42
SEH1L-208ENST00000590843 COL12A1Q99715 3063 aa6.19□□□□□ -1.42
SEH1L-208ENST00000590843 NOTCH2NLQ7Z3S9 236 aa6.17□□□□□ -1.42
SEH1L-208ENST00000590843 TACC2O95359 2948 aa6.17□□□□□ -1.42
SEH1L-208ENST00000590843 FRYLO94915 3013 aa6.16□□□□□ -1.42
SEH1L-208ENST00000590843 TENM3Q9P273 2699 aa6.15□□□□□ -1.42
SEH1L-208ENST00000590843 CFAP54Q96N23 3096 aa6.14□□□□□ -1.43
SEH1L-208ENST00000590843 LRBAP50851 2863 aa6.13□□□□□ -1.43
SEH1L-208ENST00000590843 PCNTO95613 3336 aa6.13□□□□□ -1.43
SEH1L-208ENST00000590843 TRIOO75962 3097 aa6.12□□□□□ -1.43
SEH1L-208ENST00000590843 ATMQ13315 3056 aa6.12□□□□□ -1.43
SEH1L-208ENST00000590843 TENM1Q9UKZ4 2725 aa6.11□□□□□ -1.43
SEH1L-208ENST00000590843 NBEAQ8NFP9 2946 aa6.1□□□□□ -1.43
SEH1L-208ENST00000590843 MKI67P46013 3256 aaKnown RBP6.08□□□□□ -1.44
SEH1L-208ENST00000590843 TNP1P09430 55 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms