RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 DMDP11532 3685 aa9.24□□□□□ -0.93
SMARCA4-214ENST00000589677 MMP24-AS1A0A0U1RRL7 71 aa9.23□□□□□ -0.93
SMARCA4-214ENST00000589677 Q8NDZ9 215 aa9.22□□□□□ -0.93
SMARCA4-214ENST00000589677 LOC400499M0QZD8 3231 aa9.22□□□□□ -0.93
SMARCA4-214ENST00000589677 HELZ2Q9BYK8 2649 aaKnown RBP9.22□□□□□ -0.93
SMARCA4-214ENST00000589677 WDFY3Q8IZQ1 3526 aa9.21□□□□□ -0.93
SMARCA4-214ENST00000589677 HRES1P13985 223 aa9.21□□□□□ -0.93
SMARCA4-214ENST00000589677 NBEAQ8NFP9 2946 aa9.21□□□□□ -0.93
SMARCA4-214ENST00000589677 CASC10Q5T4H9 136 aa9.21□□□□□ -0.94
SMARCA4-214ENST00000589677 DMXL1Q9Y485 3027 aa9.2□□□□□ -0.94
SMARCA4-214ENST00000589677 KRTAP1-3Q8IUG1 177 aa9.2□□□□□ -0.94
SMARCA4-214ENST00000589677 ANAPC11Q9NYG5 84 aa9.19□□□□□ -0.94
SMARCA4-214ENST00000589677 IGLV7-43P04211 117 aa9.18□□□□□ -0.94
SMARCA4-214ENST00000589677 SPRR1AP35321 89 aa9.18□□□□□ -0.94
SMARCA4-214ENST00000589677 SPINK7P58062 85 aa9.18□□□□□ -0.94
SMARCA4-214ENST00000589677 Q8N1X5 172 aa9.18□□□□□ -0.94
SMARCA4-214ENST00000589677 PSORS1C2Q9UIG4 136 aa9.18□□□□□ -0.94
SMARCA4-214ENST00000589677 KRTAP10-11P60412 298 aa9.17□□□□□ -0.94
SMARCA4-214ENST00000589677 LINC00304Q8N9R0 145 aa9.16□□□□□ -0.94
SMARCA4-214ENST00000589677 A0A1B0GU33 70 aa9.16□□□□□ -0.94
SMARCA4-214ENST00000589677 KRTAP10-3P60369 221 aa9.15□□□□□ -0.94
SMARCA4-214ENST00000589677 CR1P17927 2039 aa9.14□□□□□ -0.95
SMARCA4-214ENST00000589677 A0A087WTM6 91 aa9.14□□□□□ -0.95
SMARCA4-214ENST00000589677 WWC2-AS2Q96NR7 200 aa9.13□□□□□ -0.95
SMARCA4-214ENST00000589677 CSAG1Q6PB30 78 aa9.13□□□□□ -0.95
SMARCA4-214ENST00000589677 DMXL2Q8TDJ6 3036 aa9.13□□□□□ -0.95
SMARCA4-214ENST00000589677 KRTAP1-1Q07627 177 aa9.13□□□□□ -0.95
SMARCA4-214ENST00000589677 ASB16-AS1Q495Z4 193 aa9.12□□□□□ -0.95
SMARCA4-214ENST00000589677 LINC00472Q9H8W2 130 aa9.11□□□□□ -0.95
SMARCA4-214ENST00000589677 A0A0D9SG42 100 aa9.1□□□□□ -0.95
SMARCA4-214ENST00000589677 ADGRG4Q8IZF6 3080 aa9.08□□□□□ -0.96
SMARCA4-214ENST00000589677 C9orf92A6NGG3 77 aa9.07□□□□□ -0.96
SMARCA4-214ENST00000589677 SPRR1BP22528 89 aa9.07□□□□□ -0.96
SMARCA4-214ENST00000589677 LUZP6Q538Z0 58 aa9.07□□□□□ -0.96
SMARCA4-214ENST00000589677 K7EIL1 84 aa9.07□□□□□ -0.96
SMARCA4-214ENST00000589677 DMAC1Q96GE9 116 aa9.05□□□□□ -0.96
SMARCA4-214ENST00000589677 ZCCHC13Q8WW36 166 aaKnown RBP9.04□□□□□ -0.96
SMARCA4-214ENST00000589677 CFAP47Q6ZTR5 3102 aa9.02□□□□□ -0.96
SMARCA4-214ENST00000589677 ATMQ13315 3056 aa9.02□□□□□ -0.97
SMARCA4-214ENST00000589677 TNP2Q05952 138 aa9.01□□□□□ -0.97
SMARCA4-214ENST00000589677 FLNAP21333 2647 aaKnown RBP8.99□□□□□ -0.97
SMARCA4-214ENST00000589677 Q5W150 140 aa8.99□□□□□ -0.97
SMARCA4-214ENST00000589677 MGAM2Q2M2H8 2515 aa8.98□□□□□ -0.97
SMARCA4-214ENST00000589677 CFAP46Q8IYW2 2715 aa8.95□□□□□ -0.98
SMARCA4-214ENST00000589677 ASPMQ8IZT6 3477 aa8.95□□□□□ -0.98
SMARCA4-214ENST00000589677 BAHCC1Q9P281 2608 aa8.95□□□□□ -0.98
SMARCA4-214ENST00000589677 KRTAP29-1A8MX34 341 aaPredicted RBP8.94□□□□□ -0.98
SMARCA4-214ENST00000589677 USP24Q9UPU5 2620 aa8.94□□□□□ -0.98
SMARCA4-214ENST00000589677 Q6ZR54 194 aa8.94□□□□□ -0.98
SMARCA4-214ENST00000589677 A6NN06 94 aa8.94□□□□□ -0.98
SMARCA4-214ENST00000589677 ITPR3Q14573 2671 aa8.93□□□□□ -0.98
SMARCA4-214ENST00000589677 CENPEQ02224 2701 aa8.93□□□□□ -0.98
SMARCA4-214ENST00000589677 KRTAP26-1Q6PEX3 210 aa8.92□□□□□ -0.98
SMARCA4-214ENST00000589677 LAMA5O15230 3695 aa8.92□□□□□ -0.98
SMARCA4-214ENST00000589677 MAP1AP78559 2803 aaPredicted RBP8.92□□□□□ -0.98
SMARCA4-214ENST00000589677 MAST4O15021 2626 aa8.91□□□□□ -0.98
SMARCA4-214ENST00000589677 LCE6AA0A183 80 aa8.9□□□□□ -0.98
SMARCA4-214ENST00000589677 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.88□□□□□ -0.99
SMARCA4-214ENST00000589677 LRBAP50851 2863 aa8.87□□□□□ -0.99
SMARCA4-214ENST00000589677 SETXQ7Z333 2677 aaKnown RBP8.87□□□□□ -0.99
SMARCA4-214ENST00000589677 A0A0A0MQY5 61 aa8.86□□□□□ -0.99
SMARCA4-214ENST00000589677 SPATA8Q6RVD6 105 aa8.85□□□□□ -0.99
SMARCA4-214ENST00000589677 KRTAP4-16G5E9R7 235 aaPredicted RBP8.85□□□□□ -0.99
SMARCA4-214ENST00000589677 ATRQ13535 2644 aa8.85□□□□□ -0.99
SMARCA4-214ENST00000589677 TACC2O95359 2948 aa8.85□□□□□ -0.99
SMARCA4-214ENST00000589677 ZZEF1O43149 2961 aa8.85□□□□□ -0.99
SMARCA4-214ENST00000589677 ROMO1P60602 79 aa8.84□□□□□ -1
SMARCA4-214ENST00000589677 KALRNO60229 2985 aa8.83□□□□□ -1
SMARCA4-214ENST00000589677 PLAC8Q9NZF1 115 aa8.82□□□□□ -1
SMARCA4-214ENST00000589677 ZFHX4Q86UP3 3567 aa8.81□□□□□ -1
SMARCA4-214ENST00000589677 DCHS1Q96JQ0 3298 aa8.8□□□□□ -1
SMARCA4-214ENST00000589677 RPL37P61927 97 aaKnown RBP8.78□□□□□ -1
SMARCA4-214ENST00000589677 TEP1Q99973 2627 aaKnown RBP8.77□□□□□ -1.01
SMARCA4-214ENST00000589677 IGSF10Q6WRI0 2623 aa8.77□□□□□ -1.01
SMARCA4-214ENST00000589677 FLNCQ14315 2725 aa8.77□□□□□ -1.01
SMARCA4-214ENST00000589677 COL12A1Q99715 3063 aa8.77□□□□□ -1.01
SMARCA4-214ENST00000589677 H1FX-AS1Q4G0G2 97 aa8.76□□□□□ -1.01
SMARCA4-214ENST00000589677 LINC00483Q53H64 154 aa8.75□□□□□ -1.01
SMARCA4-214ENST00000589677 COX6B2Q6YFQ2 88 aa8.75□□□□□ -1.01
SMARCA4-214ENST00000589677 RELNP78509 3460 aa8.73□□□□□ -1.01
SMARCA4-214ENST00000589677 SMR3BP02814 79 aaPredicted RBP8.73□□□□□ -1.01
SMARCA4-214ENST00000589677 J3QL48 77 aa8.71□□□□□ -1.01
SMARCA4-214ENST00000589677 S4R3F8 94 aa8.69□□□□□ -1.02
SMARCA4-214ENST00000589677 A0A087X002 238 aa8.68□□□□□ -1.02
SMARCA4-214ENST00000589677 HRNRQ86YZ3 2850 aaPredicted RBP8.68□□□□□ -1.02
SMARCA4-214ENST00000589677 KRTAP25-1Q3LHN0 102 aa8.67□□□□□ -1.02
SMARCA4-214ENST00000589677 CAMK2N1Q7Z7J9 78 aa8.67□□□□□ -1.02
SMARCA4-214ENST00000589677 A8MU10 97 aa8.64□□□□□ -1.03
SMARCA4-214ENST00000589677 KRTAP16-1A8MUX0 517 aa8.64□□□□□ -1.03
SMARCA4-214ENST00000589677 SMG1Q96Q15 3661 aaKnown RBP8.63□□□□□ -1.03
SMARCA4-214ENST00000589677 ITPR1Q14643 2758 aa8.62□□□□□ -1.03
SMARCA4-214ENST00000589677 CHD6Q8TD26 2715 aa8.61□□□□□ -1.03
SMARCA4-214ENST00000589677 UNC79Q9P2D8 2635 aa8.61□□□□□ -1.03
SMARCA4-214ENST00000589677 ASH1LQ9NR48 2969 aaKnown RBP8.61□□□□□ -1.03
SMARCA4-214ENST00000589677 Q6ZSA8 131 aa8.61□□□□□ -1.03
SMARCA4-214ENST00000589677 ADM2Q7Z4H4 148 aa8.59□□□□□ -1.03
SMARCA4-214ENST00000589677 STAB1Q9NY15 2570 aa8.59□□□□□ -1.03
SMARCA4-214ENST00000589677 KRTAP1-5Q9BYS1 174 aa8.59□□□□□ -1.03
SMARCA4-214ENST00000589677 DCHS2Q6V1P9 2916 aa8.58□□□□□ -1.04
SMARCA4-214ENST00000589677 GCN1Q92616 2671 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms