RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 TMEM223A0PJW6 202 aa2.09□□□□□ -2.08
ZNF540-207ENST00000589285 NCR3O14931 201 aa2.09□□□□□ -2.08
ZNF540-207ENST00000589285 INAFM2P0DMQ5 153 aa2.09□□□□□ -2.08
ZNF540-207ENST00000589285 CXCL5P42830 114 aa2.09□□□□□ -2.08
ZNF540-207ENST00000589285 CXCL6P80162 114 aa2.09□□□□□ -2.08
ZNF540-207ENST00000589285 C15orf56Q8N910 161 aa2.09□□□□□ -2.08
ZNF540-207ENST00000589285 IGHV1-58A0A0C4DH39 117 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 LRCOL1A6NCL2 159 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 IBA57-AS1B1ANH7 110 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 H3BNG1 76 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 PANO1I0J062 215 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 TIMM17BO60830 172 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 Q1RN00 199 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 FP248Q71RG6 208 aaPredicted RBP2.08□□□□□ -2.08
ZNF540-207ENST00000589285 SERP2Q8N6R1 65 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 TRAV12-1A0A0B4J245 112 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 PKHD1P08F94 4074 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 RBM3P98179 157 aaKnown RBP2.08□□□□□ -2.08
ZNF540-207ENST00000589285 CIRBPQ14011 172 aaKnown RBP2.08□□□□□ -2.08
ZNF540-207ENST00000589285 TRBV7-6A0A0J9YX20 115 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 A0A0J9YXY3 114 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 RTL8CO15255 209 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 SYCNQ0VAF6 134 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 S100A7L2Q5SY68 101 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 MUSTN1Q8IVN3 82 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 C6orf48Q9UBA6 75 aa2.08□□□□□ -2.08
ZNF540-207ENST00000589285 TEX49A0A1B0GTD5 131 aa2.07□□□□□ -2.08
ZNF540-207ENST00000589285 NDUFA1O15239 70 aa2.07□□□□□ -2.08
ZNF540-207ENST00000589285 KTN1-AS1Q86SY8 53 aa2.07□□□□□ -2.08
ZNF540-207ENST00000589285 DNAH2Q9P225 4427 aa2.07□□□□□ -2.08
ZNF540-207ENST00000589285 A0A096LNI7 61 aa2.07□□□□□ -2.08
ZNF540-207ENST00000589285 LINC00643Q86TS7 51 aa2.07□□□□□ -2.08
ZNF540-207ENST00000589285 UPK3BQ9BT76 320 aa2.07□□□□□ -2.08
ZNF540-207ENST00000589285 KIAA1109Q2LD37 5005 aa2.07□□□□□ -2.08
ZNF540-207ENST00000589285 A0A087WTM6 91 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 TRBV10-2A0A0K0K1G8 114 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 LEPROTO15243 131 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 ACYP1P07311 99 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 HIST1H4AP62805 103 aaKnown RBP2.06□□□□□ -2.08
ZNF540-207ENST00000589285 KIAA0087Q14695 138 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 SOSTDC1Q6X4U4 206 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 Q8NDZ9 215 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 DNAH11Q96DT5 4516 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.06□□□□□ -2.08
ZNF540-207ENST00000589285 KRTAP1-4P0C5Y4 121 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 KRTAP26-1Q6PEX3 210 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 SDIM1Q6ZPB5 146 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 RMI2Q96E14 147 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 LINC00474Q9P2X8 69 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 EPPK1P58107 5090 aaKnown RBP2.06□□□□□ -2.08
ZNF540-207ENST00000589285 SACSQ9NZJ4 4579 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 C16orf90A8MZG2 172 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 UBE2BP63146 152 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 ATXN8Q156A1 80 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 SND1-IT1Q9HBX3 110 aa2.06□□□□□ -2.08
ZNF540-207ENST00000589285 FAT2Q9NYQ8 4349 aa2.05□□□□□ -2.08
ZNF540-207ENST00000589285 TMEM256-PLSCR3K7ERE1 68 aa2.05□□□□□ -2.08
ZNF540-207ENST00000589285 M0R378 163 aa2.05□□□□□ -2.08
ZNF540-207ENST00000589285 PHF5AQ7RTV0 110 aaKnown RBP2.05□□□□□ -2.08
ZNF540-207ENST00000589285 PRO1854Q9UHT4 67 aa2.05□□□□□ -2.08
ZNF540-207ENST00000589285 A0A0B4J2C4 111 aa2.05□□□□□ -2.08
ZNF540-207ENST00000589285 A0A1W2PNN7 141 aa2.05□□□□□ -2.08
ZNF540-207ENST00000589285 CCKP06307 115 aa2.05□□□□□ -2.08
ZNF540-207ENST00000589285 Q6ZR54 194 aa2.05□□□□□ -2.08
ZNF540-207ENST00000589285 Q6ZRN7 208 aaPredicted RBP2.05□□□□□ -2.08
ZNF540-207ENST00000589285 FAM19A3Q7Z5A8 133 aa2.05□□□□□ -2.08
ZNF540-207ENST00000589285 BIRC6Q9NR09 4857 aa2.05□□□□□ -2.08
ZNF540-207ENST00000589285 ZNF73O43830 326 aaPredicted RBP2.04□□□□□ -2.08
ZNF540-207ENST00000589285 NDUFS5O43920 106 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 KRTAP5-9P26371 169 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 Q8IZM0 81 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 Q8N814 137 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 NKAPP1Q8N9T2 125 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 LINC00308Q8TCZ7 52 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 SMCR5Q8TEV8 140 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 FAT1Q14517 4588 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 TRBV30A0A0K0K1B3 111 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 KRTAP10-1P60331 282 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 PRLHP81277 87 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 C9orf129Q5T035 196 aaKnown RBP2.04□□□□□ -2.08
ZNF540-207ENST00000589285 DEFB105AQ8NG35 78 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 HIGD2AQ9BW72 106 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 RYR2Q92736 4967 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 A8MUN3 132 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 KRTAP5-4Q6L8H1 288 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 LINC00337Q8N6G1 96 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 CLEC2BQ92478 149 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 ANAPC11Q9NYG5 84 aa2.04□□□□□ -2.08
ZNF540-207ENST00000589285 TRBV10-3A0A0K0K1G6 114 aa2.03□□□□□ -2.08
ZNF540-207ENST00000589285 C20orf197Q8N268 126 aa2.03□□□□□ -2.08
ZNF540-207ENST00000589285 GVQW2A0A096LPI5 108 aaPredicted RBP2.03□□□□□ -2.08
ZNF540-207ENST00000589285 A0A0G2JQZ4 141 aa2.02□□□□□ -2.09
ZNF540-207ENST00000589285 LST1O00453 97 aa2.02□□□□□ -2.09
ZNF540-207ENST00000589285 C6orf99Q4VX62 202 aa2.02□□□□□ -2.09
ZNF540-207ENST00000589285 SCXQ7RTU7 201 aa2.02□□□□□ -2.09
ZNF540-207ENST00000589285 CIRBP-AS1Q8TBR5 109 aa2.02□□□□□ -2.09
ZNF540-207ENST00000589285 H7BZZ5 65 aa2.02□□□□□ -2.09
ZNF540-207ENST00000589285 ATP5EP56381 51 aaPredicted RBP2.02□□□□□ -2.09
ZNF540-207ENST00000589285 LCA10Q71F78 164 aa2.02□□□□□ -2.09
ZNF540-207ENST00000589285 C9orf163Q8N9P6 203 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms