RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 FAM218AQ96MZ4 157 aa11.51□□□□□ -0.57
DDX39A-207ENST00000588542 RPS29P62273 56 aaKnown RBP11.5□□□□□ -0.57
DDX39A-207ENST00000588542 TRIAP1O43715 76 aa11.49□□□□□ -0.57
DDX39A-207ENST00000588542 HRCT1Q6UXD1 115 aa11.44□□□□□ -0.58
DDX39A-207ENST00000588542 A0A0G2JQZ4 141 aa11.43□□□□□ -0.58
DDX39A-207ENST00000588542 PPDPFLQ8WWR9 84 aa11.43□□□□□ -0.58
DDX39A-207ENST00000588542 A0A1B0GX51 115 aa11.42□□□□□ -0.58
DDX39A-207ENST00000588542 IGLV7-46A0A075B6I9 117 aa11.41□□□□□ -0.58
DDX39A-207ENST00000588542 SNCGO76070 127 aa11.41□□□□□ -0.58
DDX39A-207ENST00000588542 PSMB2P49721 201 aa11.41□□□□□ -0.58
DDX39A-207ENST00000588542 CD164Q04900 197 aa11.41□□□□□ -0.58
DDX39A-207ENST00000588542 CLEC2BQ92478 149 aa11.41□□□□□ -0.58
DDX39A-207ENST00000588542 F8WEM9 126 aa11.4□□□□□ -0.58
DDX39A-207ENST00000588542 OCIAD2Q56VL3 154 aa11.4□□□□□ -0.58
DDX39A-207ENST00000588542 FP248Q71RG6 208 aaPredicted RBP11.4□□□□□ -0.58
DDX39A-207ENST00000588542 IGLV8-61A0A075B6I0 122 aa11.39□□□□□ -0.59
DDX39A-207ENST00000588542 TSTD3H0UI37 97 aa11.38□□□□□ -0.59
DDX39A-207ENST00000588542 M0R143 59 aa11.37□□□□□ -0.59
DDX39A-207ENST00000588542 SNHG12Q9BXW3 62 aa11.37□□□□□ -0.59
DDX39A-207ENST00000588542 TPRXLQ17RH7 258 aa11.36□□□□□ -0.59
DDX39A-207ENST00000588542 COX6CP09669 75 aa11.35□□□□□ -0.59
DDX39A-207ENST00000588542 LIMD2Q9BT23 127 aa11.35□□□□□ -0.59
DDX39A-207ENST00000588542 Q6JHZ5 121 aa11.33□□□□□ -0.6
DDX39A-207ENST00000588542 IGFL1Q6UW32 110 aa11.33□□□□□ -0.6
DDX39A-207ENST00000588542 Q5XG85 94 aa11.31□□□□□ -0.6
DDX39A-207ENST00000588542 RNF213Q63HN8 5207 aa11.31□□□□□ -0.6
DDX39A-207ENST00000588542 H3BUT2 72 aa11.3□□□□□ -0.6
DDX39A-207ENST00000588542 NDUFV3P56181 108 aaKnown RBP11.3□□□□□ -0.6
DDX39A-207ENST00000588542 KRTAP13-3Q3SY46 172 aa11.29□□□□□ -0.6
DDX39A-207ENST00000588542 DNAL4O96015 105 aa11.28□□□□□ -0.6
DDX39A-207ENST00000588542 GHRHP01286 108 aa11.28□□□□□ -0.6
DDX39A-207ENST00000588542 SCGB1C2P0DMR2 95 aa11.27□□□□□ -0.61
DDX39A-207ENST00000588542 FABP2P12104 132 aa11.27□□□□□ -0.61
DDX39A-207ENST00000588542 LST1O00453 97 aa11.26□□□□□ -0.61
DDX39A-207ENST00000588542 ORMDL1Q9P0S3 153 aa11.26□□□□□ -0.61
DDX39A-207ENST00000588542 TRACP01848 142 aa11.25□□□□□ -0.61
DDX39A-207ENST00000588542 NAA38Q9BRA0 125 aaKnown RBP11.25□□□□□ -0.61
DDX39A-207ENST00000588542 CDIP1Q9H305 208 aa11.25□□□□□ -0.61
DDX39A-207ENST00000588542 MUC17Q685J3 4493 aa11.23□□□□□ -0.61
DDX39A-207ENST00000588542 TRBV7-7A0A0K0K1E9 115 aa11.23□□□□□ -0.61
DDX39A-207ENST00000588542 H3BMG7 143 aa11.22□□□□□ -0.61
DDX39A-207ENST00000588542 H3BQ85 93 aa11.22□□□□□ -0.61
DDX39A-207ENST00000588542 BATFQ16520 125 aa11.22□□□□□ -0.61
DDX39A-207ENST00000588542 C1orf195Q5TG92 126 aa11.22□□□□□ -0.61
DDX39A-207ENST00000588542 TMEM256-PLSCR3K7ERE1 68 aa11.2□□□□□ -0.62
DDX39A-207ENST00000588542 TCL1BO95988 128 aa11.19□□□□□ -0.62
DDX39A-207ENST00000588542 Q6Q795 121 aa11.18□□□□□ -0.62
DDX39A-207ENST00000588542 ASB16-AS1Q495Z4 193 aa11.17□□□□□ -0.62
DDX39A-207ENST00000588542 UBE2V1Q13404 147 aa11.15□□□□□ -0.62
DDX39A-207ENST00000588542 TEN1Q86WV5 123 aa11.15□□□□□ -0.62
DDX39A-207ENST00000588542 A0A1B0GV72 72 aa11.13□□□□□ -0.63
DDX39A-207ENST00000588542 ATXN8Q156A1 80 aa11.13□□□□□ -0.63
DDX39A-207ENST00000588542 MUC2Q02817 5179 aa11.12□□□□□ -0.63
DDX39A-207ENST00000588542 A0A1W2PNM2 257 aa11.11□□□□□ -0.63
DDX39A-207ENST00000588542 TAX1BP3O14907 124 aa11.11□□□□□ -0.63
DDX39A-207ENST00000588542 BAALC-AS2P0C853 105 aa11.11□□□□□ -0.63
DDX39A-207ENST00000588542 ANKRD29Q8N6D5 301 aa11.1□□□□□ -0.63
DDX39A-207ENST00000588542 XP32Q5T750 250 aa11.09□□□□□ -0.63
DDX39A-207ENST00000588542 C9orf118A6NHY6 69 aa11.08□□□□□ -0.64
DDX39A-207ENST00000588542 C9orf92A6NGG3 77 aa11.07□□□□□ -0.64
DDX39A-207ENST00000588542 LYRM7Q5U5X0 104 aa11.07□□□□□ -0.64
DDX39A-207ENST00000588542 A0A087WSZ3 146 aa11.06□□□□□ -0.64
DDX39A-207ENST00000588542 SS18L2Q9UHA2 77 aa11.06□□□□□ -0.64
DDX39A-207ENST00000588542 TRBV20-1A0A075B6N2 111 aa11.05□□□□□ -0.64
DDX39A-207ENST00000588542 TRBV7-4A0A0J9YYF1 115 aa11.04□□□□□ -0.64
DDX39A-207ENST00000588542 RBM3P98179 157 aaKnown RBP11.03□□□□□ -0.64
DDX39A-207ENST00000588542 A0A1W2PPM0 123 aa11.02□□□□□ -0.65
DDX39A-207ENST00000588542 CCKP06307 115 aa11.01□□□□□ -0.65
DDX39A-207ENST00000588542 Q96NJ1 140 aa11□□□□□ -0.65
DDX39A-207ENST00000588542 C9JAW5 83 aa10.98□□□□□ -0.65
DDX39A-207ENST00000588542 DSCR8Q96T75 97 aa10.98□□□□□ -0.65
DDX39A-207ENST00000588542 SEC61BP60468 96 aaKnown RBP10.96□□□□□ -0.65
DDX39A-207ENST00000588542 COL5A1-AS1Q5SY13 56 aa10.94□□□□□ -0.66
DDX39A-207ENST00000588542 JMJD7-PLA2G4BH0Y9G9 81 aa10.93□□□□□ -0.66
DDX39A-207ENST00000588542 VPS25Q9BRG1 176 aa10.93□□□□□ -0.66
DDX39A-207ENST00000588542 KRTAP4-1Q9BYQ7 146 aa10.91□□□□□ -0.66
DDX39A-207ENST00000588542 PCP4L1A6NKN8 68 aa10.9□□□□□ -0.66
DDX39A-207ENST00000588542 OBSCN-AS1Q96MR7 158 aa10.9□□□□□ -0.66
DDX39A-207ENST00000588542 LOC110117498A0A087WWA1 95 aa10.89□□□□□ -0.67
DDX39A-207ENST00000588542 Q6ZQT0 140 aa10.89□□□□□ -0.67
DDX39A-207ENST00000588542 MTURNQ8N3F0 131 aa10.89□□□□□ -0.67
DDX39A-207ENST00000588542 H3BT86 120 aa10.88□□□□□ -0.67
DDX39A-207ENST00000588542 LINC00472Q9H8W2 130 aa10.88□□□□□ -0.67
DDX39A-207ENST00000588542 SPCS1Q9Y6A9 102 aa10.87□□□□□ -0.67
DDX39A-207ENST00000588542 C14orf132Q9NPU4 83 aa10.86□□□□□ -0.67
DDX39A-207ENST00000588542 RPL37P61927 97 aaKnown RBP10.85□□□□□ -0.67
DDX39A-207ENST00000588542 PCOTHQ58A44 107 aa10.85□□□□□ -0.67
DDX39A-207ENST00000588542 IGKV4-1P06312 121 aa10.84□□□□□ -0.67
DDX39A-207ENST00000588542 DEFB116Q30KQ4 102 aa10.84□□□□□ -0.67
DDX39A-207ENST00000588542 SIGMAR1Q99720 223 aa10.84□□□□□ -0.67
DDX39A-207ENST00000588542 PDE6GP18545 87 aa10.83□□□□□ -0.68
DDX39A-207ENST00000588542 C21orf62-AS1Q17RA5 79 aa10.81□□□□□ -0.68
DDX39A-207ENST00000588542 FAT4Q6V0I7 4981 aa10.8□□□□□ -0.68
DDX39A-207ENST00000588542 A0A1B0GW54 56 aa10.79□□□□□ -0.68
DDX39A-207ENST00000588542 SMCPP49901 116 aaPredicted RBP10.78□□□□□ -0.68
DDX39A-207ENST00000588542 A0A0U1RQV1 116 aa10.77□□□□□ -0.69
DDX39A-207ENST00000588542 DSCR10P59022 87 aa10.77□□□□□ -0.69
DDX39A-207ENST00000588542 K7EP34 96 aa10.76□□□□□ -0.69
DDX39A-207ENST00000588542 Q75L30 129 aa10.76□□□□□ -0.69
DDX39A-207ENST00000588542 PRO0461Q9UI25 63 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms