RNA–Protein interactions for RNA: ENST00000587303.5

PTPRS-204, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRS, Length 6,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-204ENST00000587303 KRTAP10-1P60331 282 aa8.35□□□□□ -1.07
PTPRS-204ENST00000587303 DMAC1Q96GE9 116 aa8.34□□□□□ -1.07
PTPRS-204ENST00000587303 HELZ2Q9BYK8 2649 aaKnown RBP8.34□□□□□ -1.07
PTPRS-204ENST00000587303 OCR1Q9BZK8 76 aa8.34□□□□□ -1.07
PTPRS-204ENST00000587303 Q8NDZ9 215 aa8.33□□□□□ -1.08
PTPRS-204ENST00000587303 FLNAP21333 2647 aaKnown RBP8.33□□□□□ -1.08
PTPRS-204ENST00000587303 KRTAP10-2P60368 255 aa8.32□□□□□ -1.08
PTPRS-204ENST00000587303 ITPR3Q14573 2671 aa8.31□□□□□ -1.08
PTPRS-204ENST00000587303 H1FX-AS1Q4G0G2 97 aa8.3□□□□□ -1.08
PTPRS-204ENST00000587303 M0QZ58 72 aa8.3□□□□□ -1.08
PTPRS-204ENST00000587303 HTTP42858 3142 aa8.3□□□□□ -1.08
PTPRS-204ENST00000587303 PLAC4Q8WY50 150 aa8.28□□□□□ -1.08
PTPRS-204ENST00000587303 KRTAP1-5Q9BYS1 174 aa8.28□□□□□ -1.08
PTPRS-204ENST00000587303 RANBP2P49792 3224 aaKnown RBP8.27□□□□□ -1.09
PTPRS-204ENST00000587303 MMP24-AS1A0A0U1RRL7 71 aa8.27□□□□□ -1.09
PTPRS-204ENST00000587303 Q5W150 140 aa8.27□□□□□ -1.09
PTPRS-204ENST00000587303 OXTP01178 125 aa8.27□□□□□ -1.09
PTPRS-204ENST00000587303 Q75L30 129 aa8.26□□□□□ -1.09
PTPRS-204ENST00000587303 PRUNE2Q8WUY3 3088 aa8.24□□□□□ -1.09
PTPRS-204ENST00000587303 CDH23Q9H251 3354 aa8.24□□□□□ -1.09
PTPRS-204ENST00000587303 LAMA2P24043 3122 aaKnown RBP8.23□□□□□ -1.09
PTPRS-204ENST00000587303 UNC80Q8N2C7 3258 aa8.22□□□□□ -1.09
PTPRS-204ENST00000587303 SPRR1AP35321 89 aa8.2□□□□□ -1.1
PTPRS-204ENST00000587303 TRIOO75962 3097 aa8.19□□□□□ -1.1
PTPRS-204ENST00000587303 CELSR3Q9NYQ7 3312 aa8.19□□□□□ -1.1
PTPRS-204ENST00000587303 ADM2Q7Z4H4 148 aa8.18□□□□□ -1.1
PTPRS-204ENST00000587303 STAB1Q9NY15 2570 aa8.18□□□□□ -1.1
PTPRS-204ENST00000587303 LINC01558Q9Y6Z2 57 aa8.18□□□□□ -1.1
PTPRS-204ENST00000587303 SPATA8Q6RVD6 105 aa8.17□□□□□ -1.1
PTPRS-204ENST00000587303 CFAP46Q8IYW2 2715 aa8.17□□□□□ -1.1
PTPRS-204ENST00000587303 FP248Q71RG6 208 aaPredicted RBP8.16□□□□□ -1.1
PTPRS-204ENST00000587303 CHD9Q3L8U1 2897 aa8.15□□□□□ -1.1
PTPRS-204ENST00000587303 A0A0C4DFX4 3053 aa8.15□□□□□ -1.1
PTPRS-204ENST00000587303 ROMO1P60602 79 aa8.15□□□□□ -1.11
PTPRS-204ENST00000587303 SPRR1BP22528 89 aa8.14□□□□□ -1.11
PTPRS-204ENST00000587303 DNAH14Q0VDD8 3507 aa8.14□□□□□ -1.11
PTPRS-204ENST00000587303 RPL37P61927 97 aaKnown RBP8.13□□□□□ -1.11
PTPRS-204ENST00000587303 MGAQ8IWI9 3026 aa8.13□□□□□ -1.11
PTPRS-204ENST00000587303 LINC00472Q9H8W2 130 aa8.13□□□□□ -1.11
PTPRS-204ENST00000587303 FLG2Q5D862 2391 aaPredicted RBP8.12□□□□□ -1.11
PTPRS-204ENST00000587303 Q5VV11 94 aa8.11□□□□□ -1.11
PTPRS-204ENST00000587303 CYSTM1Q9H1C7 97 aa8.1□□□□□ -1.11
PTPRS-204ENST00000587303 Q5XG85 94 aa8.08□□□□□ -1.12
PTPRS-204ENST00000587303 WDFY4Q6ZS81 3184 aa8.07□□□□□ -1.12
PTPRS-204ENST00000587303 PANO1I0J062 215 aa8.06□□□□□ -1.12
PTPRS-204ENST00000587303 KRTAP16-1A8MUX0 517 aa8.06□□□□□ -1.12
PTPRS-204ENST00000587303 SZT2Q5T011 3432 aa8.06□□□□□ -1.12
PTPRS-204ENST00000587303 KRTAP26-1Q6PEX3 210 aa8.04□□□□□ -1.12
PTPRS-204ENST00000587303 SETXQ7Z333 2677 aaKnown RBP8.04□□□□□ -1.12
PTPRS-204ENST00000587303 Q6ZR54 194 aa8.03□□□□□ -1.12
PTPRS-204ENST00000587303 C20orf166-AS1Q96NR2 134 aa8□□□□□ -1.13
PTPRS-204ENST00000587303 A0A087X002 238 aa8□□□□□ -1.13
PTPRS-204ENST00000587303 TEP1Q99973 2627 aaKnown RBP7.98□□□□□ -1.13
PTPRS-204ENST00000587303 TEX15Q9BXT5 2789 aa7.97□□□□□ -1.13
PTPRS-204ENST00000587303 FREM2Q5SZK8 3169 aa7.97□□□□□ -1.13
PTPRS-204ENST00000587303 AKAP13Q12802 2813 aa7.94□□□□□ -1.14
PTPRS-204ENST00000587303 CENPEQ02224 2701 aa7.92□□□□□ -1.14
PTPRS-204ENST00000587303 VPS13AQ96RL7 3174 aa7.92□□□□□ -1.14
PTPRS-204ENST00000587303 COL6A3P12111 3177 aa7.92□□□□□ -1.14
PTPRS-204ENST00000587303 TRANK1O15050 2925 aa7.9□□□□□ -1.14
PTPRS-204ENST00000587303 NBEAL1Q6ZS30 2694 aa7.9□□□□□ -1.14
PTPRS-204ENST00000587303 CHD6Q8TD26 2715 aa7.9□□□□□ -1.15
PTPRS-204ENST00000587303 VCANP13611 3396 aa7.89□□□□□ -1.15
PTPRS-204ENST00000587303 A8MU10 97 aa7.88□□□□□ -1.15
PTPRS-204ENST00000587303 BAHCC1Q9P281 2608 aa7.88□□□□□ -1.15
PTPRS-204ENST00000587303 NDUFAF8A1L188 74 aa7.85□□□□□ -1.15
PTPRS-204ENST00000587303 KRTAP11-1Q8IUC1 163 aa7.84□□□□□ -1.15
PTPRS-204ENST00000587303 NOTCH2NLQ7Z3S9 236 aa7.84□□□□□ -1.15
PTPRS-204ENST00000587303 A8MUU9 505 aa7.84□□□□□ -1.15
PTPRS-204ENST00000587303 COL6A5A8TX70 2615 aa7.82□□□□□ -1.16
PTPRS-204ENST00000587303 FRYQ5TBA9 3013 aa7.82□□□□□ -1.16
PTPRS-204ENST00000587303 KRTAP4-16G5E9R7 235 aaPredicted RBP7.8□□□□□ -1.16
PTPRS-204ENST00000587303 LAMA1P25391 3075 aa7.79□□□□□ -1.16
PTPRS-204ENST00000587303 UNC79Q9P2D8 2635 aa7.79□□□□□ -1.16
PTPRS-204ENST00000587303 DMBT1Q9UGM3 2413 aaPredicted RBP7.78□□□□□ -1.16
PTPRS-204ENST00000587303 RPS29P62273 56 aaKnown RBP7.78□□□□□ -1.16
PTPRS-204ENST00000587303 Q6ZRN7 208 aaPredicted RBP7.76□□□□□ -1.17
PTPRS-204ENST00000587303 DSPP15924 2871 aaKnown RBP7.75□□□□□ -1.17
PTPRS-204ENST00000587303 SPTBN5Q9NRC6 3674 aaKnown RBP7.75□□□□□ -1.17
PTPRS-204ENST00000587303 C10orf95Q9H7T3 257 aa7.74□□□□□ -1.17
PTPRS-204ENST00000587303 KRTAP21-3Q3LHN1 58 aa7.73□□□□□ -1.17
PTPRS-204ENST00000587303 GCN1Q92616 2671 aaKnown RBP7.73□□□□□ -1.17
PTPRS-204ENST00000587303 CFAP47Q6ZTR5 3102 aa7.72□□□□□ -1.17
PTPRS-204ENST00000587303 NBEAL2Q6ZNJ1 2754 aa7.7□□□□□ -1.18
PTPRS-204ENST00000587303 ASB16-AS1Q495Z4 193 aa7.68□□□□□ -1.18
PTPRS-204ENST00000587303 KRTAP29-1A8MX34 341 aaPredicted RBP7.68□□□□□ -1.18
PTPRS-204ENST00000587303 STAB2Q8WWQ8 2551 aa7.68□□□□□ -1.18
PTPRS-204ENST00000587303 MAP1AP78559 2803 aaPredicted RBP7.68□□□□□ -1.18
PTPRS-204ENST00000587303 KRTAP13-2Q52LG2 175 aa7.68□□□□□ -1.18
PTPRS-204ENST00000587303 KALRNO60229 2985 aa7.67□□□□□ -1.18
PTPRS-204ENST00000587303 KRTAP25-1Q3LHN0 102 aa7.66□□□□□ -1.18
PTPRS-204ENST00000587303 REV3LO60673 3130 aa7.65□□□□□ -1.18
PTPRS-204ENST00000587303 KRTAP7-1Q8IUC3 87 aa7.65□□□□□ -1.18
PTPRS-204ENST00000587303 NOTCH1P46531 2555 aa7.64□□□□□ -1.19
PTPRS-204ENST00000587303 ZNF292O60281 2723 aa7.64□□□□□ -1.19
PTPRS-204ENST00000587303 SPEGQ15772 3267 aa7.64□□□□□ -1.19
PTPRS-204ENST00000587303 A0A1B0GVY2 172 aa7.63□□□□□ -1.19
PTPRS-204ENST00000587303 LRBAP50851 2863 aa7.63□□□□□ -1.19
PTPRS-204ENST00000587303 BOD1L1Q8NFC6 3051 aa7.63□□□□□ -1.19
PTPRS-204ENST00000587303 TNP1P09430 55 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms