RNA–Protein interactions for RNA: ENST00000584878.1

NLK-206, Transcript of nemo like kinase, humanhuman

TSL 1 (best)

Gene NLK, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-206ENST00000584878 IGF2RP11717 2491 aa0.79□□□□□ -2.28
NLK-206ENST00000584878 IAPPP10997 89 aa0.79□□□□□ -2.28
NLK-206ENST00000584878 RPS27P42677 84 aaKnown RBP0.79□□□□□ -2.28
NLK-206ENST00000584878 SPINK9Q5DT21 86 aa0.79□□□□□ -2.28
NLK-206ENST00000584878 RPS27LQ71UM5 84 aaKnown RBP0.79□□□□□ -2.28
NLK-206ENST00000584878 KNL1Q8NG31 2342 aa0.78□□□□□ -2.28
NLK-206ENST00000584878 SPRR1AP35321 89 aa0.78□□□□□ -2.28
NLK-206ENST00000584878 H1FX-AS1Q4G0G2 97 aa0.78□□□□□ -2.28
NLK-206ENST00000584878 DEFB105AQ8NG35 78 aa0.78□□□□□ -2.28
NLK-206ENST00000584878 CACNA1HO95180 2353 aa0.78□□□□□ -2.28
NLK-206ENST00000584878 CEP350Q5VT06 3117 aa0.78□□□□□ -2.29
NLK-206ENST00000584878 USF3Q68DE3 2245 aa0.77□□□□□ -2.29
NLK-206ENST00000584878 PKDREJQ9NTG1 2253 aa0.77□□□□□ -2.29
NLK-206ENST00000584878 ASH1LQ9NR48 2969 aaKnown RBP0.77□□□□□ -2.29
NLK-206ENST00000584878 ZFHX4Q86UP3 3567 aa0.76□□□□□ -2.29
NLK-206ENST00000584878 SPTBN2O15020 2390 aa0.76□□□□□ -2.29
NLK-206ENST00000584878 WNK2Q9Y3S1 2297 aa0.76□□□□□ -2.29
NLK-206ENST00000584878 A0A0D9SG42 100 aa0.76□□□□□ -2.29
NLK-206ENST00000584878 WFDC13Q8IUB5 93 aa0.76□□□□□ -2.29
NLK-206ENST00000584878 GVINP1Q7Z2Y8 2422 aa0.76□□□□□ -2.29
NLK-206ENST00000584878 SPTBN1Q01082 2364 aaKnown RBP0.76□□□□□ -2.29
NLK-206ENST00000584878 F8P00451 2351 aa0.75□□□□□ -2.29
NLK-206ENST00000584878 MUC5BQ9HC84 5762 aaPredicted RBP0.75□□□□□ -2.29
NLK-206ENST00000584878 DEFB130BP0DP73 79 aa0.75□□□□□ -2.29
NLK-206ENST00000584878 DEFB130AP0DP74 79 aa0.75□□□□□ -2.29
NLK-206ENST00000584878 APLNQ9ULZ1 77 aa0.75□□□□□ -2.29
NLK-206ENST00000584878 POLQO75417 2590 aa0.74□□□□□ -2.29
NLK-206ENST00000584878 PCNX1Q96RV3 2341 aa0.74□□□□□ -2.29
NLK-206ENST00000584878 MEGF8Q7Z7M0 2845 aa0.74□□□□□ -2.29
NLK-206ENST00000584878 AHNAKQ09666 5890 aaKnown RBP0.74□□□□□ -2.29
NLK-206ENST00000584878 IGLV5-48A0A075B6I7 105 aa0.74□□□□□ -2.29
NLK-206ENST00000584878 SPRR1BP22528 89 aa0.74□□□□□ -2.29
NLK-206ENST00000584878 TTC28Q96AY4 2481 aa0.74□□□□□ -2.29
NLK-206ENST00000584878 COL6A3P12111 3177 aa0.73□□□□□ -2.29
NLK-206ENST00000584878 CSPG4Q6UVK1 2322 aa0.73□□□□□ -2.29
NLK-206ENST00000584878 UBR4Q5T4S7 5183 aa0.73□□□□□ -2.29
NLK-206ENST00000584878 MMP24-AS1A0A0U1RRL7 71 aa0.72□□□□□ -2.29
NLK-206ENST00000584878 WT1-ASQ06250 92 aa0.72□□□□□ -2.29
NLK-206ENST00000584878 WFDC10BQ8IUB3 73 aa0.72□□□□□ -2.29
NLK-206ENST00000584878 ABCA2Q9BZC7 2435 aa0.72□□□□□ -2.29
NLK-206ENST00000584878 ABCA12Q86UK0 2595 aa0.71□□□□□ -2.3
NLK-206ENST00000584878 TRANK1O15050 2925 aa0.71□□□□□ -2.3
NLK-206ENST00000584878 H3BUA1 57 aa0.71□□□□□ -2.3
NLK-206ENST00000584878 POLR2KP53803 58 aaKnown RBP0.71□□□□□ -2.3
NLK-206ENST00000584878 DEFB131AP59861 70 aa0.71□□□□□ -2.3
NLK-206ENST00000584878 KLK9Q2XQG4 91 aa0.71□□□□□ -2.3
NLK-206ENST00000584878 DSPP15924 2871 aaKnown RBP0.71□□□□□ -2.3
NLK-206ENST00000584878 USP24Q9UPU5 2620 aa0.71□□□□□ -2.3
NLK-206ENST00000584878 ZNF292O60281 2723 aa0.71□□□□□ -2.3
NLK-206ENST00000584878 RPL39P62891 51 aaKnown RBP0.7□□□□□ -2.3
NLK-206ENST00000584878 ARHGAP5-AS1Q96IT6 56 aa0.7□□□□□ -2.3
NLK-206ENST00000584878 KAAG1Q9UBP8 84 aa0.7□□□□□ -2.3
NLK-206ENST00000584878 A0A0C4DFX4 3053 aa0.7□□□□□ -2.3
NLK-206ENST00000584878 CHD8Q9HCK8 2581 aa0.69□□□□□ -2.3
NLK-206ENST00000584878 CEP290O15078 2479 aa0.69□□□□□ -2.3
NLK-206ENST00000584878 S4R3F8 94 aa0.69□□□□□ -2.3
NLK-206ENST00000584878 DEFB106AQ8N104 65 aa0.68□□□□□ -2.3
NLK-206ENST00000584878 CELSR2Q9HCU4 2923 aa0.68□□□□□ -2.3
NLK-206ENST00000584878 RPL39LQ96EH5 51 aaKnown RBP0.67□□□□□ -2.3
NLK-206ENST00000584878 PIEZO1Q92508 2521 aa0.67□□□□□ -2.3
NLK-206ENST00000584878 MAST4O15021 2626 aa0.67□□□□□ -2.3
NLK-206ENST00000584878 CHD9Q3L8U1 2897 aa0.67□□□□□ -2.3
NLK-206ENST00000584878 PCNTO95613 3336 aa0.66□□□□□ -2.3
NLK-206ENST00000584878 PRRC2CQ9Y520 2896 aaKnown RBP0.66□□□□□ -2.3
NLK-206ENST00000584878 CSMD3Q7Z407 3707 aa0.66□□□□□ -2.3
NLK-206ENST00000584878 DEFB109BQ30KR1 87 aa0.66□□□□□ -2.3
NLK-206ENST00000584878 LINC01590Q5TEZ4 76 aa0.66□□□□□ -2.3
NLK-206ENST00000584878 SETXQ7Z333 2677 aaKnown RBP0.65□□□□□ -2.3
NLK-206ENST00000584878 PRLHP81277 87 aa0.65□□□□□ -2.31
NLK-206ENST00000584878 TTTY10Q9BZA0 68 aa0.65□□□□□ -2.31
NLK-206ENST00000584878 PCLOQ9Y6V0 5065 aa0.65□□□□□ -2.31
NLK-206ENST00000584878 SPTA1P02549 2419 aa0.65□□□□□ -2.31
NLK-206ENST00000584878 AKAP6Q13023 2319 aa0.64□□□□□ -2.31
NLK-206ENST00000584878 COL6A5A8TX70 2615 aa0.64□□□□□ -2.31
NLK-206ENST00000584878 SZT2Q5T011 3432 aa0.64□□□□□ -2.31
NLK-206ENST00000584878 NOP10Q9NPE3 64 aaKnown RBP0.64□□□□□ -2.31
NLK-206ENST00000584878 USP9XQ93008 2570 aaPredicted RBP0.64□□□□□ -2.31
NLK-206ENST00000584878 TNRC18O15417 2968 aaPredicted RBP0.64□□□□□ -2.31
NLK-206ENST00000584878 CREBBPQ92793 2442 aa0.64□□□□□ -2.31
NLK-206ENST00000584878 ANK2Q01484 3957 aa0.64□□□□□ -2.31
NLK-206ENST00000584878 ATRQ13535 2644 aa0.63□□□□□ -2.31
NLK-206ENST00000584878 HECTD1Q9ULT8 2610 aa0.63□□□□□ -2.31
NLK-206ENST00000584878 CLPSL2Q6UWE3 100 aa0.63□□□□□ -2.31
NLK-206ENST00000584878 CHD6Q8TD26 2715 aa0.63□□□□□ -2.31
NLK-206ENST00000584878 BDP1A6H8Y1 2624 aa0.63□□□□□ -2.31
NLK-206ENST00000584878 TEP1Q99973 2627 aaKnown RBP0.63□□□□□ -2.31
NLK-206ENST00000584878 DOPEY1Q5JWR5 2465 aa0.62□□□□□ -2.31
NLK-206ENST00000584878 AKAP13Q12802 2813 aa0.62□□□□□ -2.31
NLK-206ENST00000584878 M0QY20 66 aa0.62□□□□□ -2.31
NLK-206ENST00000584878 KRTAP20-1Q3LI63 56 aa0.62□□□□□ -2.31
NLK-206ENST00000584878 PTPN13Q12923 2485 aa0.62□□□□□ -2.31
NLK-206ENST00000584878 VCANP13611 3396 aa0.62□□□□□ -2.31
NLK-206ENST00000584878 RYR3Q15413 4870 aa0.61□□□□□ -2.31
NLK-206ENST00000584878 VWFP04275 2813 aa0.61□□□□□ -2.31
NLK-206ENST00000584878 LAMA2P24043 3122 aaKnown RBP0.61□□□□□ -2.31
NLK-206ENST00000584878 PRCDQ00LT1 54 aa0.61□□□□□ -2.31
NLK-206ENST00000584878 LEAP2Q969E1 77 aa0.61□□□□□ -2.31
NLK-206ENST00000584878 EPG5Q9HCE0 2579 aa0.61□□□□□ -2.31
NLK-206ENST00000584878 MACF1Q9UPN3 7388 aaKnown RBP0.61□□□□□ -2.31
NLK-206ENST00000584878 WNK1Q9H4A3 2382 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms