RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 CEP350Q5VT06 3117 aa2.28□□□□□ -2.04
TTC39C-208ENST00000584095 PCNX1Q96RV3 2341 aa2.27□□□□□ -2.05
TTC39C-208ENST00000584095 CCL19Q99731 98 aa2.26□□□□□ -2.05
TTC39C-208ENST00000584095 RP1L1Q8IWN7 2480 aaPredicted RBP2.26□□□□□ -2.05
TTC39C-208ENST00000584095 LY6G6CO95867 125 aa2.25□□□□□ -2.05
TTC39C-208ENST00000584095 DEFB113Q30KQ7 82 aa2.25□□□□□ -2.05
TTC39C-208ENST00000584095 TNRC18O15417 2968 aaPredicted RBP2.25□□□□□ -2.05
TTC39C-208ENST00000584095 H3BNG1 76 aa2.24□□□□□ -2.05
TTC39C-208ENST00000584095 DEFB130BP0DP73 79 aa2.24□□□□□ -2.05
TTC39C-208ENST00000584095 DEFB130AP0DP74 79 aa2.24□□□□□ -2.05
TTC39C-208ENST00000584095 CNOT1A5YKK6 2376 aaKnown RBP2.24□□□□□ -2.05
TTC39C-208ENST00000584095 COL6A6A6NMZ7 2263 aa2.24□□□□□ -2.05
TTC39C-208ENST00000584095 AKAP6Q13023 2319 aa2.23□□□□□ -2.05
TTC39C-208ENST00000584095 NBEAQ8NFP9 2946 aa2.23□□□□□ -2.05
TTC39C-208ENST00000584095 J3QKU1 62 aa2.22□□□□□ -2.05
TTC39C-208ENST00000584095 UTRNP46939 3433 aa2.22□□□□□ -2.05
TTC39C-208ENST00000584095 CACNA1HO95180 2353 aa2.22□□□□□ -2.05
TTC39C-208ENST00000584095 CUL9Q8IWT3 2517 aa2.22□□□□□ -2.05
TTC39C-208ENST00000584095 CREBBPQ92793 2442 aa2.21□□□□□ -2.06
TTC39C-208ENST00000584095 KMT2BQ9UMN6 2715 aaPredicted RBP2.21□□□□□ -2.06
TTC39C-208ENST00000584095 MGAQ8IWI9 3026 aa2.21□□□□□ -2.06
TTC39C-208ENST00000584095 DEFB136Q30KP8 78 aa2.21□□□□□ -2.06
TTC39C-208ENST00000584095 Q6ZRN7 208 aaPredicted RBP2.21□□□□□ -2.06
TTC39C-208ENST00000584095 COL6A3P12111 3177 aa2.21□□□□□ -2.06
TTC39C-208ENST00000584095 C2CD3Q4AC94 2353 aa2.21□□□□□ -2.06
TTC39C-208ENST00000584095 RANBP2P49792 3224 aaKnown RBP2.2□□□□□ -2.06
TTC39C-208ENST00000584095 A0A087WTM6 91 aa2.2□□□□□ -2.06
TTC39C-208ENST00000584095 C10orf99Q6UWK7 81 aa2.2□□□□□ -2.06
TTC39C-208ENST00000584095 COX6B2Q6YFQ2 88 aa2.2□□□□□ -2.06
TTC39C-208ENST00000584095 PTPRZ1P23471 2315 aaPredicted RBP2.2□□□□□ -2.06
TTC39C-208ENST00000584095 ZZEF1O43149 2961 aa2.2□□□□□ -2.06
TTC39C-208ENST00000584095 ANKRD17O75179 2603 aaKnown RBP2.2□□□□□ -2.06
TTC39C-208ENST00000584095 EP300Q09472 2414 aaPredicted RBP2.19□□□□□ -2.06
TTC39C-208ENST00000584095 TRIOBPQ9H2D6 2365 aa2.19□□□□□ -2.06
TTC39C-208ENST00000584095 A0A096LPF7 62 aa2.19□□□□□ -2.06
TTC39C-208ENST00000584095 SPART-AS1P0CW21 52 aa2.19□□□□□ -2.06
TTC39C-208ENST00000584095 SSBP3-AS1Q7Z2R9 100 aa2.19□□□□□ -2.06
TTC39C-208ENST00000584095 Q96NJ1 140 aa2.19□□□□□ -2.06
TTC39C-208ENST00000584095 ACACAQ13085 2346 aa2.18□□□□□ -2.06
TTC39C-208ENST00000584095 SPTA1P02549 2419 aa2.17□□□□□ -2.06
TTC39C-208ENST00000584095 LINC01556Q5JQF7 62 aa2.17□□□□□ -2.06
TTC39C-208ENST00000584095 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
TTC39C-208ENST00000584095 FBN1P35555 2871 aaKnown RBP2.17□□□□□ -2.06
TTC39C-208ENST00000584095 Q6ZSA8 131 aa2.16□□□□□ -2.06
TTC39C-208ENST00000584095 ANKHD1Q8IWZ3 2542 aaKnown RBP2.16□□□□□ -2.06
TTC39C-208ENST00000584095 ALMS1Q8TCU4 4167 aa2.16□□□□□ -2.06
TTC39C-208ENST00000584095 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.16□□□□□ -2.062e-6■■□□□ 13.9
TTC39C-208ENST00000584095 FRYQ5TBA9 3013 aa2.15□□□□□ -2.06
TTC39C-208ENST00000584095 EP400Q96L91 3159 aa2.15□□□□□ -2.06
TTC39C-208ENST00000584095 SZT2Q5T011 3432 aa2.15□□□□□ -2.06
TTC39C-208ENST00000584095 NCOR1O75376 2440 aa2.15□□□□□ -2.07
TTC39C-208ENST00000584095 CRIPTQ9P021 101 aa2.15□□□□□ -2.07
TTC39C-208ENST00000584095 TRANK1O15050 2925 aa2.15□□□□□ -2.07
TTC39C-208ENST00000584095 H0YAA0 97 aa2.14□□□□□ -2.07
TTC39C-208ENST00000584095 H1FX-AS1Q4G0G2 97 aa2.14□□□□□ -2.07
TTC39C-208ENST00000584095 DNAH14Q0VDD8 3507 aa2.14□□□□□ -2.07
TTC39C-208ENST00000584095 UNC80Q8N2C7 3258 aa2.13□□□□□ -2.07
TTC39C-208ENST00000584095 SPTAN1Q13813 2472 aaKnown RBP2.13□□□□□ -2.07
TTC39C-208ENST00000584095 NBDYA0A0U1RRE5 68 aa2.13□□□□□ -2.07
TTC39C-208ENST00000584095 VPS13AQ96RL7 3174 aa2.13□□□□□ -2.07
TTC39C-208ENST00000584095 CHD9Q3L8U1 2897 aa2.12□□□□□ -2.07
TTC39C-208ENST00000584095 CEP290O15078 2479 aa2.12□□□□□ -2.07
TTC39C-208ENST00000584095 PRLHP81277 87 aa2.12□□□□□ -2.07
TTC39C-208ENST00000584095 PIEZO2Q9H5I5 2752 aa2.12□□□□□ -2.07
TTC39C-208ENST00000584095 KALRNO60229 2985 aa2.12□□□□□ -2.07
TTC39C-208ENST00000584095 XIRP2A4UGR9 3374 aa2.12□□□□□ -2.07
TTC39C-208ENST00000584095 CHD7Q9P2D1 2997 aa2.11□□□□□ -2.07
TTC39C-208ENST00000584095 K7EIL1 84 aa2.11□□□□□ -2.07
TTC39C-208ENST00000584095 RPL37P61927 97 aaKnown RBP2.11□□□□□ -2.07
TTC39C-208ENST00000584095 SPG11Q96JI7 2443 aa2.11□□□□□ -2.07
TTC39C-208ENST00000584095 FN1P02751 2386 aaKnown RBP2.1□□□□□ -2.07
TTC39C-208ENST00000584095 ZDBF2Q9HCK1 2354 aa2.1□□□□□ -2.07
TTC39C-208ENST00000584095 FRYLO94915 3013 aa2.1□□□□□ -2.07
TTC39C-208ENST00000584095 TRIOO75962 3097 aa2.1□□□□□ -2.07
TTC39C-208ENST00000584095 GVINP1Q7Z2Y8 2422 aa2.1□□□□□ -2.07
TTC39C-208ENST00000584095 AKAP13Q12802 2813 aa2.09□□□□□ -2.07
TTC39C-208ENST00000584095 DEFB124Q8NES8 71 aa2.09□□□□□ -2.07
TTC39C-208ENST00000584095 CSPG4Q6UVK1 2322 aa2.09□□□□□ -2.07
TTC39C-208ENST00000584095 ZFHX2Q9C0A1 2572 aaPredicted RBP2.08□□□□□ -2.08
TTC39C-208ENST00000584095 DSPP15924 2871 aaKnown RBP2.08□□□□□ -2.08
TTC39C-208ENST00000584095 PRUNE2Q8WUY3 3088 aa2.08□□□□□ -2.08
TTC39C-208ENST00000584095 CFAP54Q96N23 3096 aa2.08□□□□□ -2.08
TTC39C-208ENST00000584095 MAP1AP78559 2803 aaPredicted RBP2.08□□□□□ -2.08
TTC39C-208ENST00000584095 HTN3P15516 51 aa2.08□□□□□ -2.08
TTC39C-208ENST00000584095 USP34Q70CQ2 3546 aa2.08□□□□□ -2.08
TTC39C-208ENST00000584095 LAMA2P24043 3122 aaKnown RBP2.07□□□□□ -2.08
TTC39C-208ENST00000584095 ITPR1Q14643 2758 aa2.07□□□□□ -2.08
TTC39C-208ENST00000584095 MKI67P46013 3256 aaKnown RBP2.07□□□□□ -2.08
TTC39C-208ENST00000584095 IGF2RP11717 2491 aa2.07□□□□□ -2.08
TTC39C-208ENST00000584095 A0A096LNI7 61 aa2.07□□□□□ -2.08
TTC39C-208ENST00000584095 HTTP42858 3142 aa2.07□□□□□ -2.08
TTC39C-208ENST00000584095 C5orf42Q9H799 3197 aa2.07□□□□□ -2.08
TTC39C-208ENST00000584095 PRRC2CQ9Y520 2896 aaKnown RBP2.07□□□□□ -2.08
TTC39C-208ENST00000584095 DEFB135Q30KP9 77 aa2.06□□□□□ -2.08
TTC39C-208ENST00000584095 SPTBN4Q9H254 2564 aa2.06□□□□□ -2.08
TTC39C-208ENST00000584095 SPTBN5Q9NRC6 3674 aaKnown RBP2.05□□□□□ -2.08
TTC39C-208ENST00000584095 CFAP47Q6ZTR5 3102 aa2.05□□□□□ -2.08
TTC39C-208ENST00000584095 NBASA2RRP1 2371 aa2.05□□□□□ -2.08
TTC39C-208ENST00000584095 RIF1Q5UIP0 2472 aaKnown RBP2.05□□□□□ -2.08
TTC39C-208ENST00000584095 NCOR2Q9Y618 2525 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms