RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 HMGN2P05204 90 aaKnown RBP-1.48□□□□□ -2.65
SMARCE1-219ENST00000583294 LINC00158P58513 81 aa-1.48□□□□□ -2.65
SMARCE1-219ENST00000583294 ALKQ9UM73 1620 aa-1.48□□□□□ -2.65
SMARCE1-219ENST00000583294 ACACBO00763 2458 aa-1.48□□□□□ -2.65
SMARCE1-219ENST00000583294 CMYA5Q8N3K9 4069 aa-1.49□□□□□ -2.65
SMARCE1-219ENST00000583294 DYNC1H1Q14204 4646 aaKnown RBP-1.49□□□□□ -2.65
SMARCE1-219ENST00000583294 CYB5AP00167 134 aa-1.49□□□□□ -2.65
SMARCE1-219ENST00000583294 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.49□□□□□ -2.65
SMARCE1-219ENST00000583294 ATP10BO94823 1461 aa-1.5□□□□□ -2.65
SMARCE1-219ENST00000583294 ATP7BP35670 1465 aa-1.5□□□□□ -2.65
SMARCE1-219ENST00000583294 DSPP15924 2871 aaKnown RBP-1.5□□□□□ -2.65
SMARCE1-219ENST00000583294 ACBD7Q8N6N7 88 aa-1.5□□□□□ -2.65
SMARCE1-219ENST00000583294 PLXNC1O60486 1568 aa-1.51□□□□□ -2.65
SMARCE1-219ENST00000583294 CNTLNQ9NXG0 1405 aa-1.51□□□□□ -2.65
SMARCE1-219ENST00000583294 MYH4Q9Y623 1939 aa-1.52□□□□□ -2.65
SMARCE1-219ENST00000583294 DNAH8Q96JB1 4490 aa-1.52□□□□□ -2.65
SMARCE1-219ENST00000583294 RIF1Q5UIP0 2472 aaKnown RBP-1.52□□□□□ -2.65
SMARCE1-219ENST00000583294 TRAV21A0A0B4J279 112 aa-1.52□□□□□ -2.65
SMARCE1-219ENST00000583294 ATP6V1G2-DDX39BF2Z307 99 aa-1.52□□□□□ -2.65
SMARCE1-219ENST00000583294 LYNX1G3V0Z9 82 aa-1.52□□□□□ -2.65
SMARCE1-219ENST00000583294 MT1HL1P0DM35 61 aa-1.52□□□□□ -2.65
SMARCE1-219ENST00000583294 RBP2P50120 134 aa-1.52□□□□□ -2.65
SMARCE1-219ENST00000583294 PEA15Q15121 130 aa-1.52□□□□□ -2.65
SMARCE1-219ENST00000583294 WIZO95785 1651 aa-1.53□□□□□ -2.65
SMARCE1-219ENST00000583294 MT1EP04732 61 aa-1.53□□□□□ -2.65
SMARCE1-219ENST00000583294 RGPD1P0DJD0 1748 aa-1.53□□□□□ -2.65
SMARCE1-219ENST00000583294 WFDC9Q8NEX5 89 aa-1.53□□□□□ -2.65
SMARCE1-219ENST00000583294 SMR3BP02814 79 aaPredicted RBP-1.54□□□□□ -2.66
SMARCE1-219ENST00000583294 CEP290O15078 2479 aa-1.54□□□□□ -2.66
SMARCE1-219ENST00000583294 CELSR3Q9NYQ7 3312 aa-1.54□□□□□ -2.66
SMARCE1-219ENST00000583294 GYPAP02724 150 aa-1.55□□□□□ -2.66
SMARCE1-219ENST00000583294 NCMAPQ5T1S8 102 aa-1.55□□□□□ -2.66
SMARCE1-219ENST00000583294 TIAM2Q8IVF5 1701 aa-1.55□□□□□ -2.66
SMARCE1-219ENST00000583294 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.55□□□□□ -2.66
SMARCE1-219ENST00000583294 CHD7Q9P2D1 2997 aa-1.56□□□□□ -2.66
SMARCE1-219ENST00000583294 DEFB130BP0DP73 79 aa-1.56□□□□□ -2.66
SMARCE1-219ENST00000583294 DEFB130AP0DP74 79 aa-1.56□□□□□ -2.66
SMARCE1-219ENST00000583294 USP32Q8NFA0 1604 aa-1.56□□□□□ -2.66
SMARCE1-219ENST00000583294 C5orf42Q9H799 3197 aa-1.56□□□□□ -2.66
SMARCE1-219ENST00000583294 NEXMIFQ5QGS0 1516 aa-1.56□□□□□ -2.66
SMARCE1-219ENST00000583294 CSMD1Q96PZ7 3565 aa-1.57□□□□□ -2.66
SMARCE1-219ENST00000583294 DEPDC5O75140 1603 aa-1.57□□□□□ -2.66
SMARCE1-219ENST00000583294 LCE6AA0A183 80 aa-1.57□□□□□ -2.66
SMARCE1-219ENST00000583294 IFI6P09912 130 aa-1.57□□□□□ -2.66
SMARCE1-219ENST00000583294 CLPSL2Q6UWE3 100 aa-1.57□□□□□ -2.66
SMARCE1-219ENST00000583294 SUPT6HQ7KZ85 1726 aaKnown RBP-1.57□□□□□ -2.66
SMARCE1-219ENST00000583294 NWD1Q149M9 1564 aa-1.58□□□□□ -2.66
SMARCE1-219ENST00000583294 M0R143 59 aa-1.58□□□□□ -2.66
SMARCE1-219ENST00000583294 DEFB106AQ8N104 65 aa-1.58□□□□□ -2.66
SMARCE1-219ENST00000583294 MT1LQ93083 61 aa-1.58□□□□□ -2.66
SMARCE1-219ENST00000583294 C20orf78Q9BR46 151 aa-1.58□□□□□ -2.66
SMARCE1-219ENST00000583294 SCN11AQ9UI33 1791 aa-1.58□□□□□ -2.66
SMARCE1-219ENST00000583294 MAGI3Q5TCQ9 1506 aa-1.59□□□□□ -2.66
SMARCE1-219ENST00000583294 MYMXA0A1B0GTQ4 84 aa-1.59□□□□□ -2.66
SMARCE1-219ENST00000583294 NDUFB1O75438 58 aa-1.59□□□□□ -2.66
SMARCE1-219ENST00000583294 KRTAP8-1Q8IUC2 63 aa-1.59□□□□□ -2.66
SMARCE1-219ENST00000583294 DNAH7Q8WXX0 4024 aa-1.59□□□□□ -2.66
SMARCE1-219ENST00000583294 IAPPP10997 89 aa-1.6□□□□□ -2.67
SMARCE1-219ENST00000583294 NESP48681 1621 aa-1.6□□□□□ -2.67
SMARCE1-219ENST00000583294 PLIN4Q96Q06 1357 aa-1.6□□□□□ -2.67
SMARCE1-219ENST00000583294 MYO3AQ8NEV4 1616 aa-1.61□□□□□ -2.67
SMARCE1-219ENST00000583294 SRCAPQ6ZRS2 3230 aa-1.61□□□□□ -2.67
SMARCE1-219ENST00000583294 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.61□□□□□ -2.67
SMARCE1-219ENST00000583294 MMP24-AS1A0A0U1RRL7 71 aa-1.61□□□□□ -2.67
SMARCE1-219ENST00000583294 POLR1AO95602 1720 aaPredicted RBP-1.61□□□□□ -2.67
SMARCE1-219ENST00000583294 BPTFQ12830 3046 aa-1.62□□□□□ -2.67
SMARCE1-219ENST00000583294 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.62□□□□□ -2.67
SMARCE1-219ENST00000583294 TNP1P09430 55 aa-1.62□□□□□ -2.67
SMARCE1-219ENST00000583294 RGPD3A6NKT7 1758 aaPredicted RBP-1.62□□□□□ -2.67
SMARCE1-219ENST00000583294 RGPD4Q7Z3J3 1758 aa-1.62□□□□□ -2.67
SMARCE1-219ENST00000583294 ABCC10Q5T3U5 1492 aa-1.63□□□□□ -2.67
SMARCE1-219ENST00000583294 CEP162Q5TB80 1403 aa-1.63□□□□□ -2.67
SMARCE1-219ENST00000583294 TLN2Q9Y4G6 2542 aa-1.64□□□□□ -2.67
SMARCE1-219ENST00000583294 ACYP1P07311 99 aa-1.64□□□□□ -2.67
SMARCE1-219ENST00000583294 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.64□□□□□ -2.67
SMARCE1-219ENST00000583294 COL6A5A8TX70 2615 aa-1.64□□□□□ -2.67
SMARCE1-219ENST00000583294 ITPR1Q14643 2758 aa-1.64□□□□□ -2.67
SMARCE1-219ENST00000583294 LTN1O94822 1766 aa-1.64□□□□□ -2.67
SMARCE1-219ENST00000583294 CEBPZOSA8MTT3 80 aa-1.65□□□□□ -2.67
SMARCE1-219ENST00000583294 SPTBN5Q9NRC6 3674 aaKnown RBP-1.65□□□□□ -2.67
SMARCE1-219ENST00000583294 DOT1LQ8TEK3 1739 aa-1.66□□□□□ -2.67
SMARCE1-219ENST00000583294 NCOA2Q15596 1464 aa-1.66□□□□□ -2.68
SMARCE1-219ENST00000583294 SNHG12Q9BXW3 62 aa-1.66□□□□□ -2.68
SMARCE1-219ENST00000583294 RABAC1Q9UI14 185 aa-1.66□□□□□ -2.68
SMARCE1-219ENST00000583294 UBR1Q8IWV7 1749 aa-1.66□□□□□ -2.68
SMARCE1-219ENST00000583294 CEP295Q9C0D2 2601 aa-1.67□□□□□ -2.68
SMARCE1-219ENST00000583294 LRBAP50851 2863 aa-1.67□□□□□ -2.68
SMARCE1-219ENST00000583294 IGLV5-48A0A075B6I7 105 aa-1.67□□□□□ -2.68
SMARCE1-219ENST00000583294 IFI27P40305 119 aaPredicted RBP-1.67□□□□□ -2.68
SMARCE1-219ENST00000583294 SNRPFP62306 86 aaKnown RBP-1.67□□□□□ -2.68
SMARCE1-219ENST00000583294 LINC00643Q86TS7 51 aa-1.67□□□□□ -2.68
SMARCE1-219ENST00000583294 EYSQ5T1H1 3165 aa-1.67□□□□□ -2.68
SMARCE1-219ENST00000583294 SPENQ96T58 3664 aaKnown RBP-1.67□□□□□ -2.68
SMARCE1-219ENST00000583294 PYY3Q5JQD4 70 aa-1.68□□□□□ -2.68
SMARCE1-219ENST00000583294 URB2Q14146 1524 aaKnown RBP-1.69□□□□□ -2.68
SMARCE1-219ENST00000583294 UMAD1C9J7I0 102 aa-1.69□□□□□ -2.68
SMARCE1-219ENST00000583294 WT1-ASQ06250 92 aa-1.69□□□□□ -2.68
SMARCE1-219ENST00000583294 MT1MQ8N339 61 aa-1.69□□□□□ -2.68
SMARCE1-219ENST00000583294 DNAH17Q9UFH2 4485 aa-1.7□□□□□ -2.68
SMARCE1-219ENST00000583294 DEFB131BA0A096LNP1 70 aa-1.7□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms