RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 LINC00308Q8TCZ7 52 aa8.5□□□□□ -1.05
SREBF1-221ENST00000583080 UBE2V1Q13404 147 aa8.49□□□□□ -1.05
SREBF1-221ENST00000583080 TAL2Q16559 108 aa8.49□□□□□ -1.05
SREBF1-221ENST00000583080 C6orf99Q4VX62 202 aa8.49□□□□□ -1.05
SREBF1-221ENST00000583080 SMIM29Q86T20 159 aa8.49□□□□□ -1.05
SREBF1-221ENST00000583080 SPANXDQ9BXN6 97 aa8.48□□□□□ -1.05
SREBF1-221ENST00000583080 TEX49A0A1B0GTD5 131 aa8.47□□□□□ -1.05
SREBF1-221ENST00000583080 E9PLD3 99 aa8.47□□□□□ -1.05
SREBF1-221ENST00000583080 COX8AP10176 69 aa8.46□□□□□ -1.06
SREBF1-221ENST00000583080 SSPOA2VEC9 5147 aa8.45□□□□□ -1.06
SREBF1-221ENST00000583080 A6NDN8 102 aa8.44□□□□□ -1.06
SREBF1-221ENST00000583080 USH2AO75445 5202 aa8.43□□□□□ -1.06
SREBF1-221ENST00000583080 Q6Q795 121 aa8.42□□□□□ -1.06
SREBF1-221ENST00000583080 HIGD1BQ9P298 99 aa8.42□□□□□ -1.06
SREBF1-221ENST00000583080 IGLV5-48A0A075B6I7 105 aa8.41□□□□□ -1.06
SREBF1-221ENST00000583080 TIMM17BO60830 172 aa8.41□□□□□ -1.06
SREBF1-221ENST00000583080 HSD52Q0P140 79 aa8.4□□□□□ -1.06
SREBF1-221ENST00000583080 BVES-AS1Q5T3Y7 98 aa8.4□□□□□ -1.06
SREBF1-221ENST00000583080 GTF2H5Q6ZYL4 71 aa8.4□□□□□ -1.06
SREBF1-221ENST00000583080 BATFQ16520 125 aa8.39□□□□□ -1.07
SREBF1-221ENST00000583080 TTTY13Q9BZ97 58 aa8.39□□□□□ -1.07
SREBF1-221ENST00000583080 TRBV7-6A0A0J9YX20 115 aa8.37□□□□□ -1.07
SREBF1-221ENST00000583080 ZNF815PA8K554 130 aa8.37□□□□□ -1.07
SREBF1-221ENST00000583080 K7ERU9 68 aa8.37□□□□□ -1.07
SREBF1-221ENST00000583080 A0A1B0GWB2 263 aa8.36□□□□□ -1.07
SREBF1-221ENST00000583080 TCL1BO95988 128 aa8.36□□□□□ -1.07
SREBF1-221ENST00000583080 KRTAP9-8Q9BYQ0 159 aa8.36□□□□□ -1.07
SREBF1-221ENST00000583080 TAX1BP3O14907 124 aa8.34□□□□□ -1.07
SREBF1-221ENST00000583080 VAMP3Q15836 100 aa8.34□□□□□ -1.07
SREBF1-221ENST00000583080 ATOH7Q8N100 152 aa8.33□□□□□ -1.08
SREBF1-221ENST00000583080 C9orf118A6NHY6 69 aa8.32□□□□□ -1.08
SREBF1-221ENST00000583080 CFC1P0CG37 223 aa8.32□□□□□ -1.08
SREBF1-221ENST00000583080 PCP2Q8IVA1 136 aa8.32□□□□□ -1.08
SREBF1-221ENST00000583080 OBSCN-AS1Q96MR7 158 aa8.32□□□□□ -1.08
SREBF1-221ENST00000583080 ATP11AUNQ6ZP68 121 aa8.31□□□□□ -1.08
SREBF1-221ENST00000583080 Q75L30 129 aa8.31□□□□□ -1.08
SREBF1-221ENST00000583080 C2orf91Q6ZV80 131 aa8.3□□□□□ -1.08
SREBF1-221ENST00000583080 FCGBPQ9Y6R7 5405 aaPredicted RBP8.29□□□□□ -1.08
SREBF1-221ENST00000583080 TRBV7-7A0A0K0K1E9 115 aa8.26□□□□□ -1.09
SREBF1-221ENST00000583080 A4D1N5 150 aa8.26□□□□□ -1.09
SREBF1-221ENST00000583080 F8WEM9 126 aa8.26□□□□□ -1.09
SREBF1-221ENST00000583080 K7EP34 96 aa8.26□□□□□ -1.09
SREBF1-221ENST00000583080 OCIAD2Q56VL3 154 aa8.26□□□□□ -1.09
SREBF1-221ENST00000583080 TMEM238LA0A1B0GVL6 79 aa8.25□□□□□ -1.09
SREBF1-221ENST00000583080 A6NJY4 79 aa8.25□□□□□ -1.09
SREBF1-221ENST00000583080 J3QR89 54 aa8.25□□□□□ -1.09
SREBF1-221ENST00000583080 FABP2P12104 132 aa8.25□□□□□ -1.09
SREBF1-221ENST00000583080 LYRM7Q5U5X0 104 aa8.25□□□□□ -1.09
SREBF1-221ENST00000583080 SCGB1D4Q6XE38 83 aa8.25□□□□□ -1.09
SREBF1-221ENST00000583080 NHP2Q9NX24 153 aaKnown RBP8.25□□□□□ -1.09
SREBF1-221ENST00000583080 ANKRD39Q53RE8 183 aa8.24□□□□□ -1.09
SREBF1-221ENST00000583080 SMIM11BQ8TCY0 68 aa8.24□□□□□ -1.09
SREBF1-221ENST00000583080 IGFL1Q6UW32 110 aa8.23□□□□□ -1.09
SREBF1-221ENST00000583080 CLEC2BQ92478 149 aa8.23□□□□□ -1.09
SREBF1-221ENST00000583080 A0A1W2PPM0 123 aa8.22□□□□□ -1.09
SREBF1-221ENST00000583080 MT2AP02795 61 aa8.22□□□□□ -1.09
SREBF1-221ENST00000583080 IFITM1P13164 125 aa8.22□□□□□ -1.09
SREBF1-221ENST00000583080 MUSTN1Q8IVN3 82 aa8.22□□□□□ -1.09
SREBF1-221ENST00000583080 F8W1H4 67 aa8.21□□□□□ -1.1
SREBF1-221ENST00000583080 PCP4P48539 62 aa8.21□□□□□ -1.1
SREBF1-221ENST00000583080 Q6JHZ5 121 aa8.21□□□□□ -1.1
SREBF1-221ENST00000583080 KRTAP19-1Q8IUB9 90 aa8.21□□□□□ -1.1
SREBF1-221ENST00000583080 SCGB1A1P11684 91 aa8.2□□□□□ -1.1
SREBF1-221ENST00000583080 CEND1Q8N111 149 aa8.2□□□□□ -1.1
SREBF1-221ENST00000583080 COPS9Q8WXC6 57 aa8.2□□□□□ -1.1
SREBF1-221ENST00000583080 Q96NJ1 140 aa8.2□□□□□ -1.1
SREBF1-221ENST00000583080 LCE2BO14633 110 aa8.19□□□□□ -1.1
SREBF1-221ENST00000583080 Q6ZQY7 126 aa8.19□□□□□ -1.1
SREBF1-221ENST00000583080 TRAV13-2A0A0B4J235 113 aa8.17□□□□□ -1.1
SREBF1-221ENST00000583080 LINC00575Q6W349 94 aa8.17□□□□□ -1.1
SREBF1-221ENST00000583080 SPCS1Q9Y6A9 102 aa8.17□□□□□ -1.1
SREBF1-221ENST00000583080 MT1FP04733 61 aa8.16□□□□□ -1.1
SREBF1-221ENST00000583080 Q6ZVH6 145 aa8.16□□□□□ -1.1
SREBF1-221ENST00000583080 C20orf166-AS1Q96NR2 134 aa8.16□□□□□ -1.1
SREBF1-221ENST00000583080 VPS25Q9BRG1 176 aa8.16□□□□□ -1.1
SREBF1-221ENST00000583080 TRBV20-1A0A075B6N2 111 aa8.14□□□□□ -1.11
SREBF1-221ENST00000583080 A8MUU9 505 aa8.14□□□□□ -1.11
SREBF1-221ENST00000583080 H3BUT2 72 aa8.14□□□□□ -1.11
SREBF1-221ENST00000583080 LST1O00453 97 aa8.14□□□□□ -1.11
SREBF1-221ENST00000583080 hADV29S1A0JD25 119 aa8.13□□□□□ -1.11
SREBF1-221ENST00000583080 HIST1H4GQ99525 98 aa8.11□□□□□ -1.11
SREBF1-221ENST00000583080 KRTAP9-3Q9BYQ3 159 aa8.11□□□□□ -1.11
SREBF1-221ENST00000583080 FXYD2P54710 66 aa8.09□□□□□ -1.11
SREBF1-221ENST00000583080 MTURNQ8N3F0 131 aa8.09□□□□□ -1.11
SREBF1-221ENST00000583080 MACF1Q9UPN3 7388 aaKnown RBP8.08□□□□□ -1.12
SREBF1-221ENST00000583080 H3BMG7 143 aa8.07□□□□□ -1.12
SREBF1-221ENST00000583080 FAM236DA0A1B0GTK5 79 aa8.06□□□□□ -1.12
SREBF1-221ENST00000583080 KRTAP16-1A8MUX0 517 aa8.06□□□□□ -1.12
SREBF1-221ENST00000583080 FAM236CP0DP71 79 aa8.06□□□□□ -1.12
SREBF1-221ENST00000583080 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.06□□□□□ -1.12
SREBF1-221ENST00000583080 SYNE2Q8WXH0 6885 aaKnown RBP8.06□□□□□ -1.12
SREBF1-221ENST00000583080 KRTAP10-10P60014 251 aa8.05□□□□□ -1.12
SREBF1-221ENST00000583080 DSCR10P59022 87 aa8.04□□□□□ -1.12
SREBF1-221ENST00000583080 SS18L2Q9UHA2 77 aa8.04□□□□□ -1.12
SREBF1-221ENST00000583080 PPDPFLQ8WWR9 84 aa8.03□□□□□ -1.12
SREBF1-221ENST00000583080 A0A0B4J2C4 111 aa8.02□□□□□ -1.13
SREBF1-221ENST00000583080 RAB37Q96AX2 223 aa8.02□□□□□ -1.13
SREBF1-221ENST00000583080 SIGMAR1Q99720 223 aa8.02□□□□□ -1.13
SREBF1-221ENST00000583080 HRES1P13985 223 aa8□□□□□ -1.13
SREBF1-221ENST00000583080 MPLKIPQ8TAP9 179 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms