RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 FLG2Q5D862 2391 aaPredicted RBP10.03□□□□□ -0.8
ERBB2-214ENST00000583038 NOTCH1P46531 2555 aa10.03□□□□□ -0.8
ERBB2-214ENST00000583038 CHD9Q3L8U1 2897 aa10.02□□□□□ -0.81
ERBB2-214ENST00000583038 UNC79Q9P2D8 2635 aa10.01□□□□□ -0.81
ERBB2-214ENST00000583038 KRTAP26-1Q6PEX3 210 aa10□□□□□ -0.81
ERBB2-214ENST00000583038 Q8N9P0 234 aaPredicted RBP10□□□□□ -0.81
ERBB2-214ENST00000583038 GCN1Q92616 2671 aaKnown RBP9.97□□□□□ -0.81
ERBB2-214ENST00000583038 Q5W150 140 aa9.93□□□□□ -0.82
ERBB2-214ENST00000583038 KRTAP1-5Q9BYS1 174 aa9.93□□□□□ -0.82
ERBB2-214ENST00000583038 CSAG1Q6PB30 78 aa9.93□□□□□ -0.82
ERBB2-214ENST00000583038 C5orf42Q9H799 3197 aa9.91□□□□□ -0.82
ERBB2-214ENST00000583038 DMAC1Q96GE9 116 aa9.9□□□□□ -0.82
ERBB2-214ENST00000583038 CAMK2N1Q7Z7J9 78 aa9.9□□□□□ -0.82
ERBB2-214ENST00000583038 LUZP6Q538Z0 58 aa9.89□□□□□ -0.83
ERBB2-214ENST00000583038 MGAQ8IWI9 3026 aa9.88□□□□□ -0.83
ERBB2-214ENST00000583038 FP248Q71RG6 208 aaPredicted RBP9.86□□□□□ -0.83
ERBB2-214ENST00000583038 Q5XG85 94 aa9.86□□□□□ -0.83
ERBB2-214ENST00000583038 SPINK7P58062 85 aa9.85□□□□□ -0.83
ERBB2-214ENST00000583038 LINC00483Q53H64 154 aa9.85□□□□□ -0.83
ERBB2-214ENST00000583038 TRANK1O15050 2925 aa9.84□□□□□ -0.83
ERBB2-214ENST00000583038 CYSTM1Q9H1C7 97 aa9.83□□□□□ -0.84
ERBB2-214ENST00000583038 S4R3F8 94 aa9.82□□□□□ -0.84
ERBB2-214ENST00000583038 KRTAP4-16G5E9R7 235 aaPredicted RBP9.81□□□□□ -0.84
ERBB2-214ENST00000583038 UBR5O95071 2799 aaPredicted RBP9.8□□□□□ -0.84
ERBB2-214ENST00000583038 Q5VV11 94 aa9.79□□□□□ -0.84
ERBB2-214ENST00000583038 SEC61BP60468 96 aaKnown RBP9.78□□□□□ -0.84
ERBB2-214ENST00000583038 DMBT1Q9UGM3 2413 aaPredicted RBP9.77□□□□□ -0.85
ERBB2-214ENST00000583038 LCE6AA0A183 80 aa9.76□□□□□ -0.85
ERBB2-214ENST00000583038 IGSF10Q6WRI0 2623 aa9.75□□□□□ -0.85
ERBB2-214ENST00000583038 RANBP2P49792 3224 aaKnown RBP9.75□□□□□ -0.85
ERBB2-214ENST00000583038 STAB2Q8WWQ8 2551 aa9.75□□□□□ -0.85
ERBB2-214ENST00000583038 KRTAP10-1P60331 282 aa9.75□□□□□ -0.85
ERBB2-214ENST00000583038 CFAP54Q96N23 3096 aa9.74□□□□□ -0.85
ERBB2-214ENST00000583038 M0R2T5 61 aa9.74□□□□□ -0.85
ERBB2-214ENST00000583038 Q6ZR54 194 aa9.73□□□□□ -0.85
ERBB2-214ENST00000583038 NSD1Q96L73 2696 aaPredicted RBP9.73□□□□□ -0.85
ERBB2-214ENST00000583038 HTTP42858 3142 aa9.7□□□□□ -0.86
ERBB2-214ENST00000583038 KRTAP29-1A8MX34 341 aaPredicted RBP9.7□□□□□ -0.86
ERBB2-214ENST00000583038 NBEAL2Q6ZNJ1 2754 aa9.7□□□□□ -0.86
ERBB2-214ENST00000583038 KRTAP10-2P60368 255 aa9.69□□□□□ -0.86
ERBB2-214ENST00000583038 R4GN34 69 aa9.69□□□□□ -0.86
ERBB2-214ENST00000583038 Q5VSD8 79 aa9.69□□□□□ -0.86
ERBB2-214ENST00000583038 MAP1AP78559 2803 aaPredicted RBP9.69□□□□□ -0.86
ERBB2-214ENST00000583038 DSPP15924 2871 aaKnown RBP9.68□□□□□ -0.86
ERBB2-214ENST00000583038 UTRNP46939 3433 aa9.68□□□□□ -0.86
ERBB2-214ENST00000583038 BAHCC1Q9P281 2608 aa9.64□□□□□ -0.87
ERBB2-214ENST00000583038 RPL37P61927 97 aaKnown RBP9.64□□□□□ -0.87
ERBB2-214ENST00000583038 A0A0C4DFX4 3053 aa9.63□□□□□ -0.87
ERBB2-214ENST00000583038 PANO1I0J062 215 aa9.62□□□□□ -0.87
ERBB2-214ENST00000583038 ASB16-AS1Q495Z4 193 aa9.6□□□□□ -0.87
ERBB2-214ENST00000583038 PCNTO95613 3336 aa9.59□□□□□ -0.87
ERBB2-214ENST00000583038 PRAC1Q96KF2 57 aa9.58□□□□□ -0.88
ERBB2-214ENST00000583038 WDFY4Q6ZS81 3184 aa9.57□□□□□ -0.88
ERBB2-214ENST00000583038 OXTP01178 125 aa9.57□□□□□ -0.88
ERBB2-214ENST00000583038 ITPR2Q14571 2701 aa9.55□□□□□ -0.88
ERBB2-214ENST00000583038 H1FX-AS1Q4G0G2 97 aa9.55□□□□□ -0.88
ERBB2-214ENST00000583038 RPS29P62273 56 aaKnown RBP9.55□□□□□ -0.88
ERBB2-214ENST00000583038 A0A087X002 238 aa9.53□□□□□ -0.88
ERBB2-214ENST00000583038 ROMO1P60602 79 aa9.51□□□□□ -0.89
ERBB2-214ENST00000583038 ITPR1Q14643 2758 aa9.51□□□□□ -0.89
ERBB2-214ENST00000583038 Q6ZRN7 208 aaPredicted RBP9.48□□□□□ -0.89
ERBB2-214ENST00000583038 M0QZ58 72 aa9.46□□□□□ -0.89
ERBB2-214ENST00000583038 FLNCQ14315 2725 aa9.43□□□□□ -0.9
ERBB2-214ENST00000583038 LAMA2P24043 3122 aaKnown RBP9.41□□□□□ -0.9
ERBB2-214ENST00000583038 LAMA3Q16787 3333 aa9.41□□□□□ -0.9
ERBB2-214ENST00000583038 A0A0A0MQY5 61 aa9.4□□□□□ -0.9
ERBB2-214ENST00000583038 KMT2BQ9UMN6 2715 aaPredicted RBP9.4□□□□□ -0.9
ERBB2-214ENST00000583038 NOTCH2NLQ7Z3S9 236 aa9.4□□□□□ -0.91
ERBB2-214ENST00000583038 SPATA8Q6RVD6 105 aa9.39□□□□□ -0.91
ERBB2-214ENST00000583038 KRTAP11-1Q8IUC1 163 aa9.38□□□□□ -0.91
ERBB2-214ENST00000583038 FRYQ5TBA9 3013 aa9.38□□□□□ -0.91
ERBB2-214ENST00000583038 KRTAP7-1Q8IUC3 87 aa9.38□□□□□ -0.91
ERBB2-214ENST00000583038 KRTAP13-1Q8IUC0 172 aa9.37□□□□□ -0.91
ERBB2-214ENST00000583038 PRUNE2Q8WUY3 3088 aa9.36□□□□□ -0.91
ERBB2-214ENST00000583038 TRIOO75962 3097 aa9.36□□□□□ -0.91
ERBB2-214ENST00000583038 ADM2Q7Z4H4 148 aa9.35□□□□□ -0.91
ERBB2-214ENST00000583038 HIVEP1P15822 2718 aa9.3□□□□□ -0.92
ERBB2-214ENST00000583038 NIPBLQ6KC79 2804 aaeCLIP9.3□□□□□ -0.92
ERBB2-214ENST00000583038 VPS13AQ96RL7 3174 aa9.28□□□□□ -0.92
ERBB2-214ENST00000583038 MKI67P46013 3256 aaKnown RBP9.27□□□□□ -0.92
ERBB2-214ENST00000583038 PLAC4Q8WY50 150 aa9.27□□□□□ -0.92
ERBB2-214ENST00000583038 KRTAP13-2Q52LG2 175 aa9.27□□□□□ -0.93
ERBB2-214ENST00000583038 TACC2O95359 2948 aa9.25□□□□□ -0.93
ERBB2-214ENST00000583038 UTP20O75691 2785 aaKnown RBP9.24□□□□□ -0.93
ERBB2-214ENST00000583038 H3BS24 57 aa9.21□□□□□ -0.93
ERBB2-214ENST00000583038 TENM4Q6N022 2769 aa9.2□□□□□ -0.94
ERBB2-214ENST00000583038 KRTAP21-3Q3LHN1 58 aa9.19□□□□□ -0.94
ERBB2-214ENST00000583038 APCP25054 2843 aa9.18□□□□□ -0.94
ERBB2-214ENST00000583038 KALRNO60229 2985 aa9.14□□□□□ -0.95
ERBB2-214ENST00000583038 ATMQ13315 3056 aa9.14□□□□□ -0.95
ERBB2-214ENST00000583038 A6NN06 94 aa9.13□□□□□ -0.95
ERBB2-214ENST00000583038 A8MUU9 505 aa9.13□□□□□ -0.95
ERBB2-214ENST00000583038 BRCA2P51587 3418 aa9.11□□□□□ -0.95
ERBB2-214ENST00000583038 COL12A1Q99715 3063 aa9.1□□□□□ -0.95
ERBB2-214ENST00000583038 DMXL2Q8TDJ6 3036 aa9.09□□□□□ -0.95
ERBB2-214ENST00000583038 KRTAP25-1Q3LHN0 102 aa9.07□□□□□ -0.96
ERBB2-214ENST00000583038 XIRP2A4UGR9 3374 aa9.06□□□□□ -0.96
ERBB2-214ENST00000583038 ASH1LQ9NR48 2969 aaKnown RBP9.04□□□□□ -0.96
ERBB2-214ENST00000583038 A8MU10 97 aa9.04□□□□□ -0.96
ERBB2-214ENST00000583038 C20orf166-AS1Q96NR2 134 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms