RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 SPAG11AQ6PDA7 123 aa11.67□□□□□ -0.54
TOP3A-213ENST00000582230 PPDPFLQ8WWR9 84 aa11.67□□□□□ -0.54
TOP3A-213ENST00000582230 C4orf48Q5BLP8 95 aa11.66□□□□□ -0.54
TOP3A-213ENST00000582230 SMIM29Q86T20 159 aa11.66□□□□□ -0.54
TOP3A-213ENST00000582230 SCGB1C2P0DMR2 95 aa11.65□□□□□ -0.54
TOP3A-213ENST00000582230 CLEC2BQ92478 149 aa11.65□□□□□ -0.54
TOP3A-213ENST00000582230 GHRHP01286 108 aa11.64□□□□□ -0.55
TOP3A-213ENST00000582230 F8WEM9 126 aa11.6□□□□□ -0.55
TOP3A-213ENST00000582230 DNAL4O96015 105 aa11.6□□□□□ -0.55
TOP3A-213ENST00000582230 SNHG12Q9BXW3 62 aa11.6□□□□□ -0.55
TOP3A-213ENST00000582230 SPINK1P00995 79 aa11.59□□□□□ -0.55
TOP3A-213ENST00000582230 H3BQ85 93 aa11.57□□□□□ -0.56
TOP3A-213ENST00000582230 TRACP01848 142 aa11.57□□□□□ -0.56
TOP3A-213ENST00000582230 LST1O00453 97 aa11.56□□□□□ -0.56
TOP3A-213ENST00000582230 NAA38Q9BRA0 125 aaKnown RBP11.55□□□□□ -0.56
TOP3A-213ENST00000582230 ORMDL1Q9P0S3 153 aa11.55□□□□□ -0.56
TOP3A-213ENST00000582230 RPS29P62273 56 aaKnown RBP11.54□□□□□ -0.56
TOP3A-213ENST00000582230 LYRM7Q5U5X0 104 aa11.54□□□□□ -0.56
TOP3A-213ENST00000582230 IGLV8-61A0A075B6I0 122 aa11.53□□□□□ -0.56
TOP3A-213ENST00000582230 FABP2P12104 132 aa11.52□□□□□ -0.57
TOP3A-213ENST00000582230 NDUFV3P56181 108 aaKnown RBP11.52□□□□□ -0.57
TOP3A-213ENST00000582230 CD164Q04900 197 aa11.52□□□□□ -0.57
TOP3A-213ENST00000582230 Q6JHZ5 121 aa11.52□□□□□ -0.57
TOP3A-213ENST00000582230 C9orf118A6NHY6 69 aa11.51□□□□□ -0.57
TOP3A-213ENST00000582230 H3BUT2 72 aa11.51□□□□□ -0.57
TOP3A-213ENST00000582230 TMEM256-PLSCR3K7ERE1 68 aa11.5□□□□□ -0.57
TOP3A-213ENST00000582230 TAX1BP3O14907 124 aa11.5□□□□□ -0.57
TOP3A-213ENST00000582230 ATXN8Q156A1 80 aa11.5□□□□□ -0.57
TOP3A-213ENST00000582230 TRBV20-1A0A075B6N2 111 aa11.48□□□□□ -0.57
TOP3A-213ENST00000582230 PCP4L1A6NKN8 68 aa11.48□□□□□ -0.57
TOP3A-213ENST00000582230 TCL1BO95988 128 aa11.48□□□□□ -0.57
TOP3A-213ENST00000582230 COL5A1-AS1Q5SY13 56 aa11.46□□□□□ -0.57
TOP3A-213ENST00000582230 HRCT1Q6UXD1 115 aa11.46□□□□□ -0.57
TOP3A-213ENST00000582230 UBR4Q5T4S7 5183 aa11.46□□□□□ -0.58
TOP3A-213ENST00000582230 A0A0G2JQZ4 141 aa11.44□□□□□ -0.58
TOP3A-213ENST00000582230 H3BMG7 143 aa11.44□□□□□ -0.58
TOP3A-213ENST00000582230 PRR4Q16378 134 aa11.44□□□□□ -0.58
TOP3A-213ENST00000582230 IGFL1Q6UW32 110 aa11.44□□□□□ -0.58
TOP3A-213ENST00000582230 LIMD2Q9BT23 127 aa11.44□□□□□ -0.58
TOP3A-213ENST00000582230 A0A1W2PPM0 123 aa11.43□□□□□ -0.58
TOP3A-213ENST00000582230 UBE2V1Q13404 147 aa11.43□□□□□ -0.58
TOP3A-213ENST00000582230 RETNLBQ9BQ08 111 aa11.42□□□□□ -0.58
TOP3A-213ENST00000582230 BAALC-AS2P0C853 105 aa11.41□□□□□ -0.58
TOP3A-213ENST00000582230 Q5XG85 94 aa11.38□□□□□ -0.59
TOP3A-213ENST00000582230 FP248Q71RG6 208 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-213ENST00000582230 ANKRD29Q8N6D5 301 aa11.36□□□□□ -0.59
TOP3A-213ENST00000582230 Q6Q795 121 aa11.35□□□□□ -0.59
TOP3A-213ENST00000582230 TRBV7-7A0A0K0K1E9 115 aa11.34□□□□□ -0.59
TOP3A-213ENST00000582230 IGLV7-46A0A075B6I9 117 aa11.33□□□□□ -0.6
TOP3A-213ENST00000582230 C9JAW5 83 aa11.33□□□□□ -0.6
TOP3A-213ENST00000582230 TEN1Q86WV5 123 aa11.33□□□□□ -0.6
TOP3A-213ENST00000582230 RBM3P98179 157 aaKnown RBP11.31□□□□□ -0.6
TOP3A-213ENST00000582230 SPCS1Q9Y6A9 102 aa11.31□□□□□ -0.6
TOP3A-213ENST00000582230 A0A1B0GV72 72 aa11.3□□□□□ -0.6
TOP3A-213ENST00000582230 HMCN2Q8NDA2 5059 aa11.3□□□□□ -0.6
TOP3A-213ENST00000582230 DSCR8Q96T75 97 aa11.28□□□□□ -0.6
TOP3A-213ENST00000582230 JMJD7-PLA2G4BH0Y9G9 81 aa11.27□□□□□ -0.61
TOP3A-213ENST00000582230 TRBV7-4A0A0J9YYF1 115 aa11.26□□□□□ -0.61
TOP3A-213ENST00000582230 ASB16-AS1Q495Z4 193 aa11.26□□□□□ -0.61
TOP3A-213ENST00000582230 A0A1W2PNM2 257 aa11.25□□□□□ -0.61
TOP3A-213ENST00000582230 H3BT86 120 aa11.25□□□□□ -0.61
TOP3A-213ENST00000582230 TPRXLQ17RH7 258 aa11.25□□□□□ -0.61
TOP3A-213ENST00000582230 SS18L2Q9UHA2 77 aa11.25□□□□□ -0.61
TOP3A-213ENST00000582230 C1orf195Q5TG92 126 aa11.24□□□□□ -0.61
TOP3A-213ENST00000582230 CCKP06307 115 aa11.22□□□□□ -0.61
TOP3A-213ENST00000582230 A0A087WSZ3 146 aa11.21□□□□□ -0.61
TOP3A-213ENST00000582230 K7EP34 96 aa11.2□□□□□ -0.62
TOP3A-213ENST00000582230 PDE6GP18545 87 aa11.19□□□□□ -0.62
TOP3A-213ENST00000582230 MTURNQ8N3F0 131 aa11.19□□□□□ -0.62
TOP3A-213ENST00000582230 OBSCN-AS1Q96MR7 158 aa11.19□□□□□ -0.62
TOP3A-213ENST00000582230 LOC110117498A0A087WWA1 95 aa11.17□□□□□ -0.62
TOP3A-213ENST00000582230 KRTAP13-3Q3SY46 172 aa11.17□□□□□ -0.62
TOP3A-213ENST00000582230 GTF2H5Q6ZYL4 71 aa11.17□□□□□ -0.62
TOP3A-213ENST00000582230 VPS25Q9BRG1 176 aa11.16□□□□□ -0.62
TOP3A-213ENST00000582230 CDIP1Q9H305 208 aa11.16□□□□□ -0.62
TOP3A-213ENST00000582230 C21orf62-AS1Q17RA5 79 aa11.14□□□□□ -0.63
TOP3A-213ENST00000582230 Q6ZQT0 140 aa11.14□□□□□ -0.63
TOP3A-213ENST00000582230 C14orf132Q9NPU4 83 aa11.13□□□□□ -0.63
TOP3A-213ENST00000582230 A0A1B0GW54 56 aa11.11□□□□□ -0.63
TOP3A-213ENST00000582230 SMCPP49901 116 aaPredicted RBP11.1□□□□□ -0.63
TOP3A-213ENST00000582230 PRO0461Q9UI25 63 aa11.1□□□□□ -0.63
TOP3A-213ENST00000582230 LRP2P98164 4655 aa11.07□□□□□ -0.64
TOP3A-213ENST00000582230 Q96NJ1 140 aa11.06□□□□□ -0.64
TOP3A-213ENST00000582230 LPAP08519 4548 aa11.06□□□□□ -0.64
TOP3A-213ENST00000582230 F8W1H4 67 aa11.05□□□□□ -0.64
TOP3A-213ENST00000582230 C9orf92A6NGG3 77 aa11.02□□□□□ -0.65
TOP3A-213ENST00000582230 LINC00472Q9H8W2 130 aa11.01□□□□□ -0.65
TOP3A-213ENST00000582230 IGKV4-1P06312 121 aa10.98□□□□□ -0.65
TOP3A-213ENST00000582230 XP32Q5T750 250 aa10.98□□□□□ -0.65
TOP3A-213ENST00000582230 SIGMAR1Q99720 223 aa10.97□□□□□ -0.65
TOP3A-213ENST00000582230 DEFB116Q30KQ4 102 aa10.94□□□□□ -0.66
TOP3A-213ENST00000582230 J3KT08 172 aa10.93□□□□□ -0.66
TOP3A-213ENST00000582230 NREPQ16612 68 aa10.91□□□□□ -0.66
TOP3A-213ENST00000582230 SEC61BP60468 96 aaKnown RBP10.9□□□□□ -0.66
TOP3A-213ENST00000582230 ETDBQ3ZM63 59 aa10.9□□□□□ -0.66
TOP3A-213ENST00000582230 A0A1B0GV90 55 aa10.87□□□□□ -0.67
TOP3A-213ENST00000582230 LINC00313P59037 77 aa10.84□□□□□ -0.67
TOP3A-213ENST00000582230 NDUFB1O75438 58 aa10.83□□□□□ -0.68
TOP3A-213ENST00000582230 IGHV6-1A0A0B4J1U7 121 aa10.82□□□□□ -0.68
TOP3A-213ENST00000582230 A0A1B0GVX0 72 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms