RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 VPS13BQ7Z7G8 4022 aa4.3□□□□□ -1.72
RNF43-204ENST00000580014 A0A1B0GX51 115 aa4.29□□□□□ -1.72
RNF43-204ENST00000580014 ERC2-IT1O76042 136 aa4.29□□□□□ -1.72
RNF43-204ENST00000580014 BATFQ16520 125 aa4.29□□□□□ -1.72
RNF43-204ENST00000580014 COL5A1-AS1Q5SY13 56 aa4.29□□□□□ -1.72
RNF43-204ENST00000580014 FAT1Q14517 4588 aa4.28□□□□□ -1.72
RNF43-204ENST00000580014 Q1RN00 199 aa4.28□□□□□ -1.72
RNF43-204ENST00000580014 FAM218AQ96MZ4 157 aa4.28□□□□□ -1.72
RNF43-204ENST00000580014 HERC2O95714 4834 aa4.28□□□□□ -1.72
RNF43-204ENST00000580014 COX6CP09669 75 aa4.27□□□□□ -1.73
RNF43-204ENST00000580014 KRTAP1-4P0C5Y4 121 aa4.27□□□□□ -1.73
RNF43-204ENST00000580014 SPRR1BP22528 89 aa4.27□□□□□ -1.73
RNF43-204ENST00000580014 LINC00483Q53H64 154 aa4.27□□□□□ -1.73
RNF43-204ENST00000580014 PRAC1Q96KF2 57 aa4.27□□□□□ -1.73
RNF43-204ENST00000580014 SPRR4Q96PI1 79 aa4.27□□□□□ -1.73
RNF43-204ENST00000580014 HIGD2AQ9BW72 106 aa4.27□□□□□ -1.73
RNF43-204ENST00000580014 IGLV5-48A0A075B6I7 105 aa4.26□□□□□ -1.73
RNF43-204ENST00000580014 hADV29S1A0JD25 119 aa4.26□□□□□ -1.73
RNF43-204ENST00000580014 LST1O00453 97 aa4.26□□□□□ -1.73
RNF43-204ENST00000580014 PSMB2P49721 201 aa4.26□□□□□ -1.73
RNF43-204ENST00000580014 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.26□□□□□ -1.73
RNF43-204ENST00000580014 SRRM2Q9UQ35 2752 aaKnown RBP4.25□□□□□ -1.73
RNF43-204ENST00000580014 PKHD1L1Q86WI1 4243 aa4.25□□□□□ -1.73
RNF43-204ENST00000580014 A0A1W2PPM0 123 aa4.25□□□□□ -1.73
RNF43-204ENST00000580014 H3BUT2 72 aa4.25□□□□□ -1.73
RNF43-204ENST00000580014 SLC25A20O43772 301 aa4.25□□□□□ -1.73
RNF43-204ENST00000580014 TRACP01848 142 aa4.25□□□□□ -1.73
RNF43-204ENST00000580014 FAM229BQ4G0N7 80 aa4.25□□□□□ -1.73
RNF43-204ENST00000580014 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
RNF43-204ENST00000580014 CLEC2BQ92478 149 aa4.25□□□□□ -1.73
RNF43-204ENST00000580014 NAA38Q9BRA0 125 aaKnown RBP4.25□□□□□ -1.73
RNF43-204ENST00000580014 ZNF706Q9Y5V0 76 aaPredicted RBP4.25□□□□□ -1.73
RNF43-204ENST00000580014 TRBV20-1A0A075B6N2 111 aa4.24□□□□□ -1.73
RNF43-204ENST00000580014 KRTAP29-1A8MX34 341 aaPredicted RBP4.24□□□□□ -1.73
RNF43-204ENST00000580014 OCIAD2Q56VL3 154 aa4.24□□□□□ -1.73
RNF43-204ENST00000580014 LYRM7Q5U5X0 104 aa4.24□□□□□ -1.73
RNF43-204ENST00000580014 ST20-AS1Q8NBB2 130 aa4.24□□□□□ -1.73
RNF43-204ENST00000580014 PPDPFLQ8WWR9 84 aa4.24□□□□□ -1.73
RNF43-204ENST00000580014 SNCGO76070 127 aa4.23□□□□□ -1.73
RNF43-204ENST00000580014 TCL1BO95988 128 aa4.23□□□□□ -1.73
RNF43-204ENST00000580014 SCGB1C2P0DMR2 95 aa4.23□□□□□ -1.73
RNF43-204ENST00000580014 Q6ZQY7 126 aa4.23□□□□□ -1.73
RNF43-204ENST00000580014 Q8N377 158 aa4.23□□□□□ -1.73
RNF43-204ENST00000580014 LINC01600Q96MT4 127 aa4.23□□□□□ -1.73
RNF43-204ENST00000580014 TEX49A0A1B0GTD5 131 aa4.22□□□□□ -1.73
RNF43-204ENST00000580014 H3BQ85 93 aa4.22□□□□□ -1.73
RNF43-204ENST00000580014 OXTP01178 125 aa4.22□□□□□ -1.73
RNF43-204ENST00000580014 FABP2P12104 132 aa4.22□□□□□ -1.73
RNF43-204ENST00000580014 KRTAP10-8P60410 259 aa4.22□□□□□ -1.73
RNF43-204ENST00000580014 ATXN8Q156A1 80 aa4.22□□□□□ -1.73
RNF43-204ENST00000580014 Q6ZVQ6 151 aa4.21□□□□□ -1.74
RNF43-204ENST00000580014 ANAPC11Q9NYG5 84 aa4.21□□□□□ -1.74
RNF43-204ENST00000580014 IGLV8-61A0A075B6I0 122 aa4.2□□□□□ -1.74
RNF43-204ENST00000580014 A0A087X002 238 aa4.2□□□□□ -1.74
RNF43-204ENST00000580014 CRYGAP11844 174 aa4.2□□□□□ -1.74
RNF43-204ENST00000580014 KRTAP13-2Q52LG2 175 aa4.2□□□□□ -1.74
RNF43-204ENST00000580014 NOTCH2NLQ7Z3S9 236 aa4.2□□□□□ -1.74
RNF43-204ENST00000580014 K7EP34 96 aa4.19□□□□□ -1.74
RNF43-204ENST00000580014 DNAL4O96015 105 aa4.19□□□□□ -1.74
RNF43-204ENST00000580014 MT1HL1P0DM35 61 aa4.19□□□□□ -1.74
RNF43-204ENST00000580014 ORMDL1Q9P0S3 153 aa4.19□□□□□ -1.74
RNF43-204ENST00000580014 SPCS1Q9Y6A9 102 aa4.19□□□□□ -1.74
RNF43-204ENST00000580014 TMEM256-PLSCR3K7ERE1 68 aa4.18□□□□□ -1.74
RNF43-204ENST00000580014 SSBP3-AS1Q7Z2R9 100 aa4.18□□□□□ -1.74
RNF43-204ENST00000580014 DEFB105AQ8NG35 78 aa4.18□□□□□ -1.74
RNF43-204ENST00000580014 LAMTOR3Q9UHA4 124 aa4.18□□□□□ -1.74
RNF43-204ENST00000580014 FLG2Q5D862 2391 aaPredicted RBP4.18□□□□□ -1.74
RNF43-204ENST00000580014 H3BMG7 143 aa4.17□□□□□ -1.74
RNF43-204ENST00000580014 H3BT86 120 aa4.17□□□□□ -1.74
RNF43-204ENST00000580014 BAALC-AS2P0C853 105 aa4.17□□□□□ -1.74
RNF43-204ENST00000580014 NDUFV3P56181 108 aaKnown RBP4.17□□□□□ -1.74
RNF43-204ENST00000580014 C3orf22Q8N5N4 141 aa4.17□□□□□ -1.74
RNF43-204ENST00000580014 PRO0461Q9UI25 63 aa4.17□□□□□ -1.74
RNF43-204ENST00000580014 OBSCN-AS1Q96MR7 158 aa4.16□□□□□ -1.74
RNF43-204ENST00000580014 ABCA13Q86UQ4 5058 aa4.15□□□□□ -1.74
RNF43-204ENST00000580014 C9JAW5 83 aa4.15□□□□□ -1.75
RNF43-204ENST00000580014 Q6JHZ5 121 aa4.15□□□□□ -1.75
RNF43-204ENST00000580014 GTF2H5Q6ZYL4 71 aa4.15□□□□□ -1.75
RNF43-204ENST00000580014 Q8NBF4 154 aa4.15□□□□□ -1.75
RNF43-204ENST00000580014 MOBPQ13875 183 aa4.14□□□□□ -1.75
RNF43-204ENST00000580014 ANKRD29Q8N6D5 301 aa4.14□□□□□ -1.75
RNF43-204ENST00000580014 TYMSOSQ8TAI1 123 aa4.14□□□□□ -1.75
RNF43-204ENST00000580014 CD164Q04900 197 aa4.13□□□□□ -1.75
RNF43-204ENST00000580014 Q6Q795 121 aa4.13□□□□□ -1.75
RNF43-204ENST00000580014 TRBV7-4A0A0J9YYF1 115 aa4.12□□□□□ -1.75
RNF43-204ENST00000580014 A0A1B0GV90 55 aa4.12□□□□□ -1.75
RNF43-204ENST00000580014 F8W1H4 67 aa4.12□□□□□ -1.75
RNF43-204ENST00000580014 F8WEM9 126 aa4.12□□□□□ -1.75
RNF43-204ENST00000580014 JMJD7-PLA2G4BH0Y9G9 81 aa4.12□□□□□ -1.75
RNF43-204ENST00000580014 SPAG11AQ6PDA7 123 aa4.12□□□□□ -1.75
RNF43-204ENST00000580014 IGFL1Q6UW32 110 aa4.12□□□□□ -1.75
RNF43-204ENST00000580014 FAT3Q8TDW7 4589 aa4.11□□□□□ -1.75
RNF43-204ENST00000580014 PCLOQ9Y6V0 5065 aa4.11□□□□□ -1.75
RNF43-204ENST00000580014 RPS29P62273 56 aaKnown RBP4.11□□□□□ -1.75
RNF43-204ENST00000580014 C9orf153Q5TBE3 101 aa4.11□□□□□ -1.75
RNF43-204ENST00000580014 Q5XG85 94 aa4.11□□□□□ -1.75
RNF43-204ENST00000580014 LINC00304Q8N9R0 145 aa4.11□□□□□ -1.75
RNF43-204ENST00000580014 LRP1Q07954 4544 aaKnown RBP4.11□□□□□ -1.75
RNF43-204ENST00000580014 TNXBP22105 4242 aa4.1□□□□□ -1.75
RNF43-204ENST00000580014 LOC110117498A0A087WWA1 95 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms