RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 PIEZO1Q92508 2521 aa0.58□□□□□ -2.32
TOP2A-203ENST00000577706 S4R3F8 94 aa0.58□□□□□ -2.32
TOP2A-203ENST00000577706 FAM208AQ9UK61 1670 aaKnown RBP0.58□□□□□ -2.32
TOP2A-203ENST00000577706 C2CD3Q4AC94 2353 aa0.57□□□□□ -2.32
TOP2A-203ENST00000577706 PRLHP81277 87 aa0.57□□□□□ -2.32
TOP2A-203ENST00000577706 WT1-ASQ06250 92 aa0.57□□□□□ -2.32
TOP2A-203ENST00000577706 WFDC10BQ8IUB3 73 aa0.57□□□□□ -2.32
TOP2A-203ENST00000577706 KAAG1Q9UBP8 84 aa0.57□□□□□ -2.32
TOP2A-203ENST00000577706 PRM1P04553 51 aa0.56□□□□□ -2.32
TOP2A-203ENST00000577706 PLCE1Q9P212 2302 aa0.56□□□□□ -2.32
TOP2A-203ENST00000577706 PTPRZ1P23471 2315 aaPredicted RBP0.55□□□□□ -2.32
TOP2A-203ENST00000577706 SPTBN2O15020 2390 aa0.55□□□□□ -2.32
TOP2A-203ENST00000577706 CNOT1A5YKK6 2376 aaKnown RBP0.54□□□□□ -2.32
TOP2A-203ENST00000577706 SPINK1P00995 79 aa0.54□□□□□ -2.32
TOP2A-203ENST00000577706 DOPEY2Q9Y3R5 2298 aa0.54□□□□□ -2.32
TOP2A-203ENST00000577706 ZNF292O60281 2723 aa0.53□□□□□ -2.32
TOP2A-203ENST00000577706 DEFB135Q30KP9 77 aa0.53□□□□□ -2.32
TOP2A-203ENST00000577706 SPTBN1Q01082 2364 aaKnown RBP0.52□□□□□ -2.33
TOP2A-203ENST00000577706 ABCA12Q86UK0 2595 aa0.51□□□□□ -2.33
TOP2A-203ENST00000577706 FRAS1Q86XX4 4008 aa0.51□□□□□ -2.33
TOP2A-203ENST00000577706 BDP1A6H8Y1 2624 aa0.51□□□□□ -2.33
TOP2A-203ENST00000577706 M0R2T5 61 aa0.51□□□□□ -2.33
TOP2A-203ENST00000577706 TNXBP22105 4242 aa0.51□□□□□ -2.33
TOP2A-203ENST00000577706 GVINP1Q7Z2Y8 2422 aa0.51□□□□□ -2.33
TOP2A-203ENST00000577706 DDX60Q8IY21 1712 aaKnown RBP0.51□□□□□ -2.33
TOP2A-203ENST00000577706 SMIM2Q9BVW6 85 aa0.51□□□□□ -2.33
TOP2A-203ENST00000577706 ALMS1Q8TCU4 4167 aa0.51□□□□□ -2.33
TOP2A-203ENST00000577706 U3KQA8 63 aa0.5□□□□□ -2.33
TOP2A-203ENST00000577706 KIF21BO75037 1637 aa0.49□□□□□ -2.33
TOP2A-203ENST00000577706 CELSR2Q9HCU4 2923 aa0.49□□□□□ -2.33
TOP2A-203ENST00000577706 CSMD3Q7Z407 3707 aa0.49□□□□□ -2.33
TOP2A-203ENST00000577706 TRPM2O94759 1503 aa0.48□□□□□ -2.33
TOP2A-203ENST00000577706 CHD9Q3L8U1 2897 aa0.48□□□□□ -2.33
TOP2A-203ENST00000577706 F8P00451 2351 aa0.48□□□□□ -2.33
TOP2A-203ENST00000577706 REV3LO60673 3130 aa0.47□□□□□ -2.33
TOP2A-203ENST00000577706 AHNAKQ09666 5890 aaKnown RBP0.47□□□□□ -2.33
TOP2A-203ENST00000577706 ANK2Q01484 3957 aa0.47□□□□□ -2.33
TOP2A-203ENST00000577706 TENM4Q6N022 2769 aa0.46□□□□□ -2.34
TOP2A-203ENST00000577706 NDUFA1O15239 70 aa0.46□□□□□ -2.34
TOP2A-203ENST00000577706 ATP7AQ04656 1500 aa0.46□□□□□ -2.34
TOP2A-203ENST00000577706 TPRP12270 2363 aaKnown RBP0.46□□□□□ -2.34
TOP2A-203ENST00000577706 KNL1Q8NG31 2342 aa0.46□□□□□ -2.34
TOP2A-203ENST00000577706 MMP24-AS1A0A0U1RRL7 71 aa0.45□□□□□ -2.34
TOP2A-203ENST00000577706 H0YGG7 62 aa0.45□□□□□ -2.34
TOP2A-203ENST00000577706 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
TOP2A-203ENST00000577706 CHD6Q8TD26 2715 aa0.44□□□□□ -2.34
TOP2A-203ENST00000577706 AKAP6Q13023 2319 aa0.44□□□□□ -2.34
TOP2A-203ENST00000577706 AKAP13Q12802 2813 aa0.44□□□□□ -2.34
TOP2A-203ENST00000577706 H3BUA1 57 aa0.43□□□□□ -2.34
TOP2A-203ENST00000577706 ABCA2Q9BZC7 2435 aa0.43□□□□□ -2.34
TOP2A-203ENST00000577706 DSPP15924 2871 aaKnown RBP0.43□□□□□ -2.34
TOP2A-203ENST00000577706 WNK2Q9Y3S1 2297 aa0.42□□□□□ -2.34
TOP2A-203ENST00000577706 IGLV5-48A0A075B6I7 105 aa0.42□□□□□ -2.34
TOP2A-203ENST00000577706 PCNX1Q96RV3 2341 aa0.42□□□□□ -2.34
TOP2A-203ENST00000577706 SYNE1Q8NF91 8797 aaKnown RBP0.42□□□□□ -2.34
TOP2A-203ENST00000577706 VWFP04275 2813 aa0.41□□□□□ -2.34
TOP2A-203ENST00000577706 APCP25054 2843 aa0.41□□□□□ -2.34
TOP2A-203ENST00000577706 PKDREJQ9NTG1 2253 aa0.41□□□□□ -2.34
TOP2A-203ENST00000577706 BPTFQ12830 3046 aa0.41□□□□□ -2.34
TOP2A-203ENST00000577706 IGF2RP11717 2491 aa0.41□□□□□ -2.34
TOP2A-203ENST00000577706 SAMD9LQ8IVG5 1584 aa0.4□□□□□ -2.34
TOP2A-203ENST00000577706 ATRQ13535 2644 aa0.4□□□□□ -2.34
TOP2A-203ENST00000577706 TRANK1O15050 2925 aa0.4□□□□□ -2.35
TOP2A-203ENST00000577706 MDN1Q9NU22 5596 aa0.4□□□□□ -2.35
TOP2A-203ENST00000577706 H3BNG1 76 aa0.39□□□□□ -2.35
TOP2A-203ENST00000577706 MUC5BQ9HC84 5762 aaPredicted RBP0.39□□□□□ -2.35
TOP2A-203ENST00000577706 PDE4DIPQ5VU43 2346 aa0.37□□□□□ -2.35
TOP2A-203ENST00000577706 CELSR1Q9NYQ6 3014 aa0.36□□□□□ -2.35
TOP2A-203ENST00000577706 OTOGQ6ZRI0 2925 aa0.36□□□□□ -2.35
TOP2A-203ENST00000577706 CLTCL1P53675 1640 aa0.36□□□□□ -2.35
TOP2A-203ENST00000577706 SPRR2DP22532 72 aa0.36□□□□□ -2.35
TOP2A-203ENST00000577706 ZFYVE26Q68DK2 2539 aa0.36□□□□□ -2.35
TOP2A-203ENST00000577706 NCOR1O75376 2440 aa0.36□□□□□ -2.35
TOP2A-203ENST00000577706 HECTD1Q9ULT8 2610 aa0.35□□□□□ -2.35
TOP2A-203ENST00000577706 EP300Q09472 2414 aaPredicted RBP0.35□□□□□ -2.35
TOP2A-203ENST00000577706 TNRC18O15417 2968 aaPredicted RBP0.35□□□□□ -2.35
TOP2A-203ENST00000577706 FAT2Q9NYQ8 4349 aa0.35□□□□□ -2.35
TOP2A-203ENST00000577706 M0QY20 66 aa0.35□□□□□ -2.35
TOP2A-203ENST00000577706 POLR2KP53803 58 aaKnown RBP0.35□□□□□ -2.35
TOP2A-203ENST00000577706 SNRPGP62308 76 aaKnown RBP0.35□□□□□ -2.35
TOP2A-203ENST00000577706 RPL39P62891 51 aaKnown RBP0.35□□□□□ -2.35
TOP2A-203ENST00000577706 NOP10Q9NPE3 64 aaKnown RBP0.35□□□□□ -2.35
TOP2A-203ENST00000577706 PHGR1C9JFL3 82 aa0.34□□□□□ -2.36
TOP2A-203ENST00000577706 CSPG4Q6UVK1 2322 aa0.34□□□□□ -2.36
TOP2A-203ENST00000577706 LRP1Q07954 4544 aaKnown RBP0.33□□□□□ -2.36
TOP2A-203ENST00000577706 A8MTW9 85 aa0.33□□□□□ -2.36
TOP2A-203ENST00000577706 DEFB131AP59861 70 aa0.33□□□□□ -2.36
TOP2A-203ENST00000577706 KRTAP6-2Q3LI66 62 aa0.33□□□□□ -2.36
TOP2A-203ENST00000577706 BSNQ9UPA5 3926 aa0.33□□□□□ -2.36
TOP2A-203ENST00000577706 MUC5ACP98088 5654 aa0.32□□□□□ -2.36
TOP2A-203ENST00000577706 DEFB110Q30KQ9 67 aa0.32□□□□□ -2.36
TOP2A-203ENST00000577706 CLPSL2Q6UWE3 100 aa0.32□□□□□ -2.36
TOP2A-203ENST00000577706 LEAP2Q969E1 77 aa0.32□□□□□ -2.36
TOP2A-203ENST00000577706 DUOX1Q9NRD9 1551 aa0.32□□□□□ -2.36
TOP2A-203ENST00000577706 UNC79Q9P2D8 2635 aa0.32□□□□□ -2.36
TOP2A-203ENST00000577706 RPL39LQ96EH5 51 aaKnown RBP0.31□□□□□ -2.36
TOP2A-203ENST00000577706 CACNA1AO00555 2505 aa0.31□□□□□ -2.36
TOP2A-203ENST00000577706 UBR5O95071 2799 aaPredicted RBP0.31□□□□□ -2.36
TOP2A-203ENST00000577706 PRKDCP78527 4128 aaKnown RBP0.31□□□□□ -2.36
TOP2A-203ENST00000577706 KMT2DO14686 5537 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms