RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 KRTAP2-2Q9BYT5 123 aa2.33□□□□□ -2.04
BRIP1-202ENST00000577598 KCNQ1DNQ9H478 68 aa2.33□□□□□ -2.04
BRIP1-202ENST00000577598 PIN1P1O15428 100 aa2.32□□□□□ -2.04
BRIP1-202ENST00000577598 NOTCH2Q04721 2471 aa2.31□□□□□ -2.04
BRIP1-202ENST00000577598 KRTAP9-8Q9BYQ0 159 aa2.31□□□□□ -2.04
BRIP1-202ENST00000577598 LEAP2Q969E1 77 aa2.3□□□□□ -2.04
BRIP1-202ENST00000577598 A0A0D9SG42 100 aa2.3□□□□□ -2.04
BRIP1-202ENST00000577598 IGSF10Q6WRI0 2623 aa2.29□□□□□ -2.04
BRIP1-202ENST00000577598 PCNTO95613 3336 aa2.29□□□□□ -2.04
BRIP1-202ENST00000577598 SETXQ7Z333 2677 aaKnown RBP2.29□□□□□ -2.04
BRIP1-202ENST00000577598 DEFB106AQ8N104 65 aa2.29□□□□□ -2.04
BRIP1-202ENST00000577598 TMEM167BQ9NRX6 74 aa2.29□□□□□ -2.04
BRIP1-202ENST00000577598 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.29□□□□□ -2.04
BRIP1-202ENST00000577598 KRTAP9-2Q9BYQ4 174 aa2.29□□□□□ -2.04
BRIP1-202ENST00000577598 COX6B1P14854 86 aa2.28□□□□□ -2.04
BRIP1-202ENST00000577598 GOLGB1Q14789 3259 aaKnown RBP2.28□□□□□ -2.05
BRIP1-202ENST00000577598 DEFB130BP0DP73 79 aa2.27□□□□□ -2.05
BRIP1-202ENST00000577598 DEFB130AP0DP74 79 aa2.27□□□□□ -2.05
BRIP1-202ENST00000577598 USP9YO00507 2555 aaPredicted RBP2.27□□□□□ -2.05
BRIP1-202ENST00000577598 KRTAP4-12Q9BQ66 201 aa2.26□□□□□ -2.05
BRIP1-202ENST00000577598 APCP25054 2843 aa2.26□□□□□ -2.05
BRIP1-202ENST00000577598 KRTAP1-5Q9BYS1 174 aa2.25□□□□□ -2.05
BRIP1-202ENST00000577598 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
BRIP1-202ENST00000577598 TOMM7Q9P0U1 55 aa2.25□□□□□ -2.05
BRIP1-202ENST00000577598 I3L2K1 104 aa2.25□□□□□ -2.05
BRIP1-202ENST00000577598 KRTAP1-3Q8IUG1 177 aa2.25□□□□□ -2.05
BRIP1-202ENST00000577598 SPTBN4Q9H254 2564 aa2.24□□□□□ -2.05
BRIP1-202ENST00000577598 NF1P21359 2839 aa2.24□□□□□ -2.05
BRIP1-202ENST00000577598 KRTAP10-10P60014 251 aa2.24□□□□□ -2.05
BRIP1-202ENST00000577598 SPRR1BP22528 89 aa2.24□□□□□ -2.05
BRIP1-202ENST00000577598 DEFB131BA0A096LNP1 70 aa2.24□□□□□ -2.05
BRIP1-202ENST00000577598 SPRR1AP35321 89 aa2.24□□□□□ -2.05
BRIP1-202ENST00000577598 OTOGQ6ZRI0 2925 aa2.23□□□□□ -2.05
BRIP1-202ENST00000577598 RPS27LQ71UM5 84 aaKnown RBP2.23□□□□□ -2.05
BRIP1-202ENST00000577598 COL12A1Q99715 3063 aa2.23□□□□□ -2.05
BRIP1-202ENST00000577598 A0A1B0GVY2 172 aa2.22□□□□□ -2.05
BRIP1-202ENST00000577598 DEFB119Q8N690 84 aa2.22□□□□□ -2.05
BRIP1-202ENST00000577598 CNFNQ9BYD5 112 aa2.22□□□□□ -2.05
BRIP1-202ENST00000577598 CENPFP49454 3210 aa2.22□□□□□ -2.05
BRIP1-202ENST00000577598 SMIM2Q9BVW6 85 aa2.22□□□□□ -2.05
BRIP1-202ENST00000577598 WDR87Q6ZQQ6 2873 aa2.21□□□□□ -2.06
BRIP1-202ENST00000577598 SPINK9Q5DT21 86 aa2.21□□□□□ -2.06
BRIP1-202ENST00000577598 SRCAPQ6ZRS2 3230 aa2.21□□□□□ -2.06
BRIP1-202ENST00000577598 LCE1DQ5T752 114 aa2.21□□□□□ -2.06
BRIP1-202ENST00000577598 DNAH12Q6ZR08 3092 aa2.21□□□□□ -2.06
BRIP1-202ENST00000577598 LCE6AA0A183 80 aa2.2□□□□□ -2.06
BRIP1-202ENST00000577598 KRTAP1-1Q07627 177 aa2.2□□□□□ -2.06
BRIP1-202ENST00000577598 GCN1Q92616 2671 aaKnown RBP2.2□□□□□ -2.06
BRIP1-202ENST00000577598 C10orf99Q6UWK7 81 aa2.2□□□□□ -2.06
BRIP1-202ENST00000577598 SNRPGP62308 76 aaKnown RBP2.2□□□□□ -2.06
BRIP1-202ENST00000577598 MYO9AB2RTY4 2548 aa2.18□□□□□ -2.06
BRIP1-202ENST00000577598 FLNAP21333 2647 aaKnown RBP2.18□□□□□ -2.06
BRIP1-202ENST00000577598 CCL22O00626 93 aa2.18□□□□□ -2.06
BRIP1-202ENST00000577598 UTRNP46939 3433 aa2.18□□□□□ -2.06
BRIP1-202ENST00000577598 KRTAP4-8Q9BYQ9 185 aa2.17□□□□□ -2.06
BRIP1-202ENST00000577598 CFAP46Q8IYW2 2715 aa2.17□□□□□ -2.06
BRIP1-202ENST00000577598 H0YAA0 97 aa2.17□□□□□ -2.06
BRIP1-202ENST00000577598 RPL39P62891 51 aaKnown RBP2.17□□□□□ -2.06
BRIP1-202ENST00000577598 DEFB114Q30KQ6 69 aa2.17□□□□□ -2.06
BRIP1-202ENST00000577598 KRTAP13-1Q8IUC0 172 aa2.17□□□□□ -2.06
BRIP1-202ENST00000577598 CEP350Q5VT06 3117 aa2.16□□□□□ -2.06
BRIP1-202ENST00000577598 HTTP42858 3142 aa2.16□□□□□ -2.06
BRIP1-202ENST00000577598 SYNE1Q8NF91 8797 aaKnown RBP2.16□□□□□ -2.06
BRIP1-202ENST00000577598 FBN3Q75N90 2809 aa2.15□□□□□ -2.06
BRIP1-202ENST00000577598 TNRC18O15417 2968 aaPredicted RBP2.15□□□□□ -2.06
BRIP1-202ENST00000577598 NBEAL2Q6ZNJ1 2754 aa2.15□□□□□ -2.07
BRIP1-202ENST00000577598 CD52P31358 61 aa2.15□□□□□ -2.07
BRIP1-202ENST00000577598 BRCA2P51587 3418 aa2.14□□□□□ -2.07
BRIP1-202ENST00000577598 LOC100996750A0A140TA64 210 aa2.13□□□□□ -2.07
BRIP1-202ENST00000577598 J3QKU1 62 aa2.13□□□□□ -2.07
BRIP1-202ENST00000577598 KRTAP4-6Q9BYQ5 205 aa2.13□□□□□ -2.07
BRIP1-202ENST00000577598 H0YGG7 62 aa2.12□□□□□ -2.07
BRIP1-202ENST00000577598 DCHS2Q6V1P9 2916 aa2.12□□□□□ -2.07
BRIP1-202ENST00000577598 A8MTW9 85 aa2.11□□□□□ -2.07
BRIP1-202ENST00000577598 SZT2Q5T011 3432 aa2.11□□□□□ -2.07
BRIP1-202ENST00000577598 ARHGAP5-AS1Q96IT6 56 aa2.1□□□□□ -2.07
BRIP1-202ENST00000577598 FLNCQ14315 2725 aa2.1□□□□□ -2.07
BRIP1-202ENST00000577598 K7EIL1 84 aa2.1□□□□□ -2.07
BRIP1-202ENST00000577598 ZZEF1O43149 2961 aa2.09□□□□□ -2.07
BRIP1-202ENST00000577598 TENM2Q9NT68 2774 aa2.09□□□□□ -2.07
BRIP1-202ENST00000577598 COX14Q96I36 57 aa2.09□□□□□ -2.07
BRIP1-202ENST00000577598 TEP1Q99973 2627 aaKnown RBP2.09□□□□□ -2.08
BRIP1-202ENST00000577598 DEFB109BQ30KR1 87 aa2.08□□□□□ -2.08
BRIP1-202ENST00000577598 RPL39LQ96EH5 51 aaKnown RBP2.08□□□□□ -2.08
BRIP1-202ENST00000577598 MGAM2Q2M2H8 2515 aa2.08□□□□□ -2.08
BRIP1-202ENST00000577598 LINC01590Q5TEZ4 76 aa2.08□□□□□ -2.08
BRIP1-202ENST00000577598 HIVEP1P15822 2718 aa2.08□□□□□ -2.08
BRIP1-202ENST00000577598 KRTAP10-7P60409 375 aaPredicted RBP2.08□□□□□ -2.08
BRIP1-202ENST00000577598 DEFB123Q8N688 67 aa2.08□□□□□ -2.08
BRIP1-202ENST00000577598 A0A0C4DFX4 3053 aa2.07□□□□□ -2.08
BRIP1-202ENST00000577598 NDUFA1O15239 70 aa2.07□□□□□ -2.08
BRIP1-202ENST00000577598 UNC80Q8N2C7 3258 aa2.06□□□□□ -2.08
BRIP1-202ENST00000577598 USP34Q70CQ2 3546 aa2.06□□□□□ -2.08
BRIP1-202ENST00000577598 CHD7Q9P2D1 2997 aa2.06□□□□□ -2.08
BRIP1-202ENST00000577598 DNAH3Q8TD57 4116 aa2.06□□□□□ -2.08
BRIP1-202ENST00000577598 KRTAP10-4P60372 401 aaPredicted RBP2.06□□□□□ -2.08
BRIP1-202ENST00000577598 LAMA2P24043 3122 aaKnown RBP2.06□□□□□ -2.08
BRIP1-202ENST00000577598 NSD1Q96L73 2696 aaPredicted RBP2.05□□□□□ -2.08
BRIP1-202ENST00000577598 FBN2P35556 2912 aa2.05□□□□□ -2.08
BRIP1-202ENST00000577598 LAMA3Q16787 3333 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms